iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-15	55.6	201	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H++ +++++f  ++ llv+ sdD ++k W++
   Q: 201  HNGVIHSIEFdlQSQLLVTTSDDRSVKFWNI 231
           9*********98559**************96 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MVLISDAFGL EISPNGILVG HGDQAVLYSS EPKVELPVQL REGKVRGFAW SSLRKSQRLL 60
LLYSENEYSL IRCTTSSEND LFQLVYEGET RDWINAALFL EDENESEDRK RFVLHTSHSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACACTGAAC GCTTGAGTTT ATCAAAACAA CGTGTTGTTA TTAAATTATG GTTTTGATTT 60
CTGACGCATT CGGTCTGGAA ATATCCCCAA ACGGGATCCT GGTTGGTATG TATATTGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0003723--F:RNA binding
GO:0008285--P:negative regulation of cell proliferation

KEGG

dme:Dmel_CG33172

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000976	Aegilops tauschii	21.48	2.00e-13	70.90
IUUC-Aml-001786	Ailuropoda melanoleuca	22.94	5.00e-26	112.00
IUUC-Atr-003053	Amborella trichopoda	24.02	8.00e-10	59.30
IUUC-Apl-003178	Anas platyrhynchos	22.51	2.00e-12	66.20
IUUC-Aca-004886	Anolis carolinensis	23.04	1.00e-39	157.00
IUUC-Aly-005509	Arabidopsis lyrata	22.63	9.00e-21	95.50
IUUC-Ath-007109	Arabidopsis thaliana	22.92	2.00e-19	91.30
IUUC-Acl-008020	Aspergillus clavatus	22.50	4.00e-06	47.00
IUUC-Afu-009035	Aspergillus fumigatus	19.87	2.00e-10	61.20
IUUC-Ani-009359	Aspergillus nidulans	22.82	6.00e-13	69.30
IUUC-Ang-009692	Aspergillus niger	20.00	2.00e-10	61.20
IUUC-Aor-010056	Aspergillus oryzae	21.81	3.00e-09	57.00
IUUC-Ate-010299	Aspergillus terreus	19.97	4.00e-12	66.60
IUUC-Ame-011051	Astyanax mexicanus	23.21	7.00e-25	108.00
IUUC-Bta-012793	Bos taurus	24.47	3.00e-24	106.00
IUUC-Bdi-014401	Brachypodium distachyon	19.73	2.00e-15	77.80
IUUC-Bol-015628	Brassica oleracea	22.14	9.00e-17	82.00
IUUC-Bra-017446	Brassica rapa	25.56	1.00e-13	71.60
IUUC-Cja-018910	Callithrix jacchus	23.00	3.00e-25	110.00
IUUC-Cfa-021260	Canis familiaris	22.27	2.00e-25	111.00
IUUC-Cpo-022205	Cavia porcellus	29.67	7.00e-15	75.90
IUUC-Csa-023510	Chlorocebus sabaeus	30.62	3.00e-15	77.40
IUUC-Dre-028004	Danio rerio	23.13	7.00e-15	75.90
IUUC-Dno-029804	Dasypus novemcinctus	28.99	3.00e-16	80.10
IUUC-Dor-030512	Dipodomys ordii	22.83	4.00e-21	96.70
IUUC-Ete-033076	Echinops telfairi	30.72	8.00e-16	78.60
IUUC-Eca-033727	Equus caballus	21.40	3.00e-17	83.60
IUUC-Eeu-035210	Erinaceus europaeus	29.05	1.00e-15	78.20
IUUC-Fca-035433	Felis catus	22.28	2.00e-26	114.00
IUUC-Fal-036807	Ficedula albicollis	23.39	4.00e-15	75.90
IUUC-Gmo-039180	Gadus morhua	28.71	2.00e-11	63.90
IUUC-Gga-040482	Gallus gallus	23.38	5.00e-17	82.80
IUUC-Gac-042066	Gasterosteus aculeatus	27.09	3.00e-11	63.50
IUUC-Ggo-044942	Gorilla gorilla	24.60	4.00e-24	106.00
IUUC-Hsa-046408	Homo sapiens	22.59	6.00e-25	109.00
IUUC-Hvu-047448	Hordeum vulgare	19.61	8.00e-17	82.40
IUUC-Itr-048756	Ictidomys tridecemlineatus	32.12	7.00e-15	75.90
IUUC-Kpa-049257	Komagataella pastoris	21.24	5.00e-23	102.00
IUUC-Lch-050170	Latimeria chalumnae	23.63	5.00e-40	159.00
IUUC-Lpe-051575	Leersia perrieri	18.08	2.00e-10	61.60
IUUC-Loc-052341	Lepisosteus oculatus	27.38	1.00e-14	75.10
IUUC-Lma-053318	Leptosphaeria maculans	19.34	2.00e-11	63.90
IUUC-Laf-054299	Loxodonta africana	23.89	5.00e-26	112.00
IUUC-Mcc-055438	Macaca mulatta	21.95	8.00e-24	105.00
IUUC-Meu-056206	Macropus eugenii	20.38	2.00e-17	84.30
IUUC-Mor-056928	Magnaporthe oryzae	24.55	2.00e-06	47.80
IUUC-Mtr-058455	Medicago truncatula	24.88	3.00e-09	57.40
IUUC-Mga-059962	Meleagris gallopavo	23.67	7.00e-17	81.30
IUUC-Mmr-061353	Microcebus murinus	23.20	6.00e-27	115.00
IUUC-Mdo-062061	Monodelphis domestica	32.69	2.00e-17	84.30
IUUC-Mmu-064386	Mus musculus	24.10	2.00e-24	107.00
IUUC-Mac-065653	Musa acuminata	19.67	8.00e-12	65.90
IUUC-Mpu-066420	Mustela putorius furo	30.14	5.00e-15	76.30
IUUC-Mlu-068104	Myotis lucifugus	28.71	1.00e-14	75.10
IUUC-Nfi-068301	Neosartorya fischeri	20.94	7.00e-11	62.80
IUUC-Nle-069836	Nomascus leucogenys	22.77	3.00e-24	107.00
IUUC-Ont-071605	Oreochromis niloticus	25.75	2.00e-09	57.80
IUUC-Oan-073645	Ornithorhynchus anatinus	29.61	6.00e-21	95.90
IUUC-Ocu-074708	Oryctolagus cuniculus	22.94	4.00e-25	110.00
IUUC-Oba-075290	Oryza barthii	22.07	7.00e-10	59.30
IUUC-Obr-076647	Oryza brachyantha	26.02	3.00e-14	73.60
IUUC-Ogl-077628	Oryza glaberrima	23.67	2.00e-13	71.20
IUUC-Ogu-078209	Oryza glumaepatula	21.85	5.00e-10	59.70
IUUC-Oin-079342	Oryza indica	26.04	9.00e-13	68.90
IUUC-Olo-080623	Oryza longistaminata	23.71	3.00e-13	69.30
IUUC-Ome-081776	Oryza meridionalis	25.47	2.00e-11	64.70
IUUC-Oni-082311	Oryza nivara	26.04	9.00e-13	68.90
IUUC-Opu-083195	Oryza punctata	23.63	5.00e-13	70.10
IUUC-Oru-085006	Oryza rufipogon	22.07	7.00e-10	59.30
IUUC-Osa-085317	Oryza sativa	23.67	2.00e-13	70.90
IUUC-Ola-087145	Oryzias latipes	21.90	3.00e-17	83.60
IUUC-Oga-088206	Otolemur garnettii	23.37	9.00e-24	105.00
IUUC-Oar-089802	Ovis aries	24.54	4.00e-23	103.00
IUUC-Ptr-091528	Pan troglodytes	21.69	4.00e-17	83.20
IUUC-Pan-092782	Papio anubis	30.62	3.00e-15	77.00
IUUC-Psi-093102	Pelodiscus sinensis	29.26	1.00e-18	87.40
IUUC-Ppa-095436	Physcomitrella patens	24.88	2.00e-12	67.80
IUUC-Pfo-097423	Poecilia formosa	24.87	8.00e-10	59.30
IUUC-Pab-097763	Pongo abelii	22.33	4.00e-24	106.00
IUUC-Pop-099090	Populus trichocarpa	24.50	1.00e-09	58.90
IUUC-Pca-100173	Procavia capensis	27.94	7.00e-16	79.30
IUUC-Ppe-101580	Prunus persica	19.59	2.00e-11	65.10
IUUC-Pva-102715	Pteropus vampyrus	30.62	2.00e-15	77.80
IUUC-Rno-105122	Rattus norvegicus	24.35	3.00e-27	116.00
IUUC-Sce-106465	Saccharomyces cerevisiae	21.37	3.00e-11	63.50
IUUC-Sha-107208	Sarcophilus harrisii	22.34	3.00e-27	116.00
IUUC-Sit-109932	Setaria italica	19.69	2.00e-17	84.70
IUUC-Sly-111685	Solanum lycopersicum	24.87	3.00e-15	77.40
IUUC-Sar-112998	Sorex araneus	23.02	7.00e-29	122.00
IUUC-Sbi-114074	Sorghum bicolor	24.06	3.00e-14	73.90
IUUC-Ssc-115619	Sus scrofa	30.66	2.00e-15	77.40
IUUC-Tgu-117485	Taeniopygia guttata	26.94	3.00e-14	72.80
IUUC-Tru-118104	Takifugu rubripes	23.03	5.00e-23	102.00
IUUC-Tni-119995	Tetraodon nigroviridis	29.05	6.00e-12	66.20
IUUC-Tca-121790	Theobroma cacao	22.10	3.00e-13	70.90
IUUC-Tae-123488	Triticum aestivum	19.85	1.00e-20	95.10
IUUC-Tur-126473	Triticum urartu	20.51	2.00e-16	81.60
IUUC-Ttr-128387	Tursiops truncatus	30.19	5.00e-15	76.30
IUUC-Vda-129804	Verticillium dahliae	23.90	3.00e-07	50.40
IUUC-Vpa-130257	Vicugna pacos	24.57	2.00e-10	60.10
IUUC-Vvi-131701	Vitis vinifera	22.58	2.00e-13	70.90
IUUC-Xtr-132622	Xenopus tropicalis	23.40	1.00e-42	167.00
IUUC-Xma-134014	Xiphophorus maculatus	22.88	8.00e-21	95.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence