iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114887

UUCD1 version

UUC-SoB-01428

Ensembl Protein ID

Sb10g019740.1

UniProt Accession

A0A194YJC6; A0A194YJC6_SORBI

Genbank Protein ID

KXG20053.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G147900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g019740	Sb10g019740.1	Sb10g019740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-09	36.3	451	497

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl..af....sd..tl...lvsGsdDgtikvWDlrtgvll 36
           gH+  + cl  ++    sd  ++   l+sGs D+t++vWDl+ g+ll
   Q: 451  GHKRAILCLaaHYmhahSDsrNFhraLISGSLDCTVRVWDLDAGTLL 497
           79999999843449999443444667***************999876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKCHSVSALW SPSPPSHHVT AAAATPAALF TGAADGTVLH WPLAPASASP SPRPSSLLCA 60
HAAAITSLCP LPSPASLLAA CTAGVLSLFS TSAPLRCLRR RSLPPWAGSP SLVAPLPSIT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTGCC ACTCTGTGTC CGCGCTCTGG TCGCCGTCAC CGCCGTCACA CCACGTCACC 60
GCCGCCGCCG CAACCCCGGC CGCGCTCTTC ACCGGCGCCG CAGACGGCAC CGTCCTCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	61.82	0.00e+00	838.00
IUUC-Aml-001481	Ailuropoda melanoleuca	28.40	1.00e-12	68.60
IUUC-Atr-002981	Amborella trichopoda	45.88	1.00e-106	380.00
IUUC-Apl-003943	Anas platyrhynchos	29.09	6.00e-13	69.30
IUUC-Aca-005145	Anolis carolinensis	28.40	1.00e-12	68.60
IUUC-Aly-005740	Arabidopsis lyrata	33.76	4.00e-132	465.00
IUUC-Ath-006797	Arabidopsis thaliana	32.84	2.00e-124	439.00
IUUC-Ame-011180	Astyanax mexicanus	26.51	2.00e-12	68.20
IUUC-Bta-012912	Bos taurus	28.40	1.00e-12	68.90
IUUC-Bol-016538	Brassica oleracea	34.33	6.00e-128	451.00
IUUC-Bra-018098	Brassica rapa	34.26	2.00e-129	456.00
IUUC-Cel-018565	Caenorhabditis elegans	24.36	1.00e-10	61.60
IUUC-Cja-019970	Callithrix jacchus	28.40	1.00e-12	68.60
IUUC-Cfa-020677	Canis familiaris	28.40	1.00e-12	68.60
IUUC-Cpo-021408	Cavia porcellus	28.40	1.00e-12	68.90
IUUC-Csa-023786	Chlorocebus sabaeus	28.40	1.00e-12	68.90
IUUC-Cho-024612	Choloepus hoffmanni	28.40	1.00e-12	68.90
IUUC-Cin-025255	Ciona intestinalis	30.25	2.00e-14	75.10
IUUC-Csv-026361	Ciona savignyi	30.30	1.00e-14	75.50
IUUC-Dre-027951	Danio rerio	26.45	5.00e-11	62.00
IUUC-Dno-029072	Dasypus novemcinctus	28.40	1.00e-12	68.60
IUUC-Dor-030771	Dipodomys ordii	27.45	4.00e-10	60.10
IUUC-Dme-031768	Drosophila melanogaster	27.61	2.00e-12	67.80
IUUC-Ete-032492	Echinops telfairi	28.40	2.00e-12	67.80
IUUC-Eca-033496	Equus caballus	28.40	1.00e-12	68.60
IUUC-Fca-035530	Felis catus	28.40	1.00e-12	68.90
IUUC-Fal-037238	Ficedula albicollis	27.88	2.00e-12	67.80
IUUC-Gmo-039528	Gadus morhua	27.11	2.00e-12	67.80
IUUC-Gga-041043	Gallus gallus	29.09	4.00e-13	70.10
IUUC-Gac-042524	Gasterosteus aculeatus	26.51	2.00e-12	68.20
IUUC-Gma-043201	Glycine max	46.56	4.00e-112	399.00
IUUC-Ggo-045112	Gorilla gorilla	28.40	1.00e-12	68.60
IUUC-Hsa-046732	Homo sapiens	28.40	1.00e-12	68.60
IUUC-Itr-048340	Ictidomys tridecemlineatus	27.88	3.00e-13	68.90
IUUC-Lch-050643	Latimeria chalumnae	28.48	1.00e-12	68.60
IUUC-Lpe-051544	Leersia perrieri	66.87	0.00e+00	992.00
IUUC-Loc-051774	Lepisosteus oculatus	27.50	1.00e-13	72.00
IUUC-Laf-054349	Loxodonta africana	28.40	1.00e-12	68.60
IUUC-Mcc-055800	Macaca mulatta	28.40	1.00e-12	68.60
IUUC-Meu-056091	Macropus eugenii	20.26	9.00e-09	55.80
IUUC-Mtr-058676	Medicago truncatula	45.13	2.00e-109	390.00
IUUC-Mmr-061271	Microcebus murinus	28.40	1.00e-12	68.60
IUUC-Mdo-062622	Monodelphis domestica	29.01	8.00e-13	69.30
IUUC-Mmu-063262	Mus musculus	28.40	5.00e-12	66.60
IUUC-Mac-065659	Musa acuminata	54.49	8.00e-136	477.00
IUUC-Mpu-066523	Mustela putorius furo	28.74	2.00e-12	68.20
IUUC-Mlu-067288	Myotis lucifugus	27.78	3.00e-12	67.40
IUUC-Nle-069610	Nomascus leucogenys	28.40	1.00e-12	68.60
IUUC-Opr-070413	Ochotona princeps	27.33	4.00e-10	60.50
IUUC-Ont-072199	Oreochromis niloticus	26.67	1.00e-12	68.60
IUUC-Oan-073095	Ornithorhynchus anatinus	23.19	7.00e-14	72.80
IUUC-Ocu-074257	Oryctolagus cuniculus	28.40	1.00e-12	68.60
IUUC-Oba-075713	Oryza barthii	65.16	0.00e+00	995.00
IUUC-Obr-076894	Oryza brachyantha	64.29	0.00e+00	1036.00
IUUC-Ogl-077521	Oryza glaberrima	65.16	0.00e+00	993.00
IUUC-Ogu-078103	Oryza glumaepatula	65.19	0.00e+00	1004.00
IUUC-Oin-080169	Oryza indica	65.72	0.00e+00	1016.00
IUUC-Olo-080818	Oryza longistaminata	62.97	0.00e+00	857.00
IUUC-Ome-081902	Oryza meridionalis	67.37	0.00e+00	1037.00
IUUC-Oni-082333	Oryza nivara	65.16	0.00e+00	991.00
IUUC-Opu-083952	Oryza punctata	62.78	0.00e+00	967.00
IUUC-Oru-085112	Oryza rufipogon	65.05	0.00e+00	994.00
IUUC-Osa-085615	Oryza sativa	65.58	0.00e+00	822.00
IUUC-Ola-087177	Oryzias latipes	26.67	6.00e-13	69.70
IUUC-Olu-087828	Ostreococcus lucimarinus	28.70	6.00e-17	82.40
IUUC-Oga-088290	Otolemur garnettii	28.74	3.00e-12	67.40
IUUC-Oar-089575	Ovis aries	27.61	5.00e-13	70.10
IUUC-Ptr-091041	Pan troglodytes	28.40	1.00e-12	68.60
IUUC-Pan-092048	Papio anubis	28.40	1.00e-12	68.60
IUUC-Psi-093637	Pelodiscus sinensis	29.01	5.00e-13	70.10
IUUC-Pma-094117	Petromyzon marinus	31.47	3.00e-10	59.30
IUUC-Pfo-096529	Poecilia formosa	26.67	1.00e-12	68.60
IUUC-Pab-098194	Pongo abelii	28.40	1.00e-12	68.60
IUUC-Pop-099546	Populus trichocarpa	35.40	1.00e-148	520.00
IUUC-Ppe-101653	Prunus persica	45.11	1.00e-114	407.00
IUUC-Pva-102803	Pteropus vampyrus	29.01	1.00e-12	68.90
IUUC-Rno-105904	Rattus norvegicus	28.30	3.00e-11	64.30
IUUC-Sha-106926	Sarcophilus harrisii	22.82	9.00e-15	75.50
IUUC-Smo-109304	Selaginella moellendorffii	28.97	5.00e-80	292.00
IUUC-Sit-110049	Setaria italica	80.11	0.00e+00	1243.00
IUUC-Sly-111516	Solanum lycopersicum	43.23	9.00e-100	358.00
IUUC-Stu-111982	Solanum tuberosum	53.36	4.00e-69	256.00
IUUC-Sar-113730	Sorex araneus	27.78	2.00e-12	67.80
IUUC-Ssc-116213	Sus scrofa	27.88	1.00e-12	68.20
IUUC-Tgu-117297	Taeniopygia guttata	29.01	8.00e-13	69.30
IUUC-Tru-117887	Takifugu rubripes	27.27	2.00e-12	68.20
IUUC-Tsy-118970	Tarsius syrichta	28.40	2.00e-12	68.20
IUUC-Tni-119791	Tetraodon nigroviridis	26.67	7.00e-13	68.60
IUUC-Tca-121391	Theobroma cacao	47.10	6.00e-115	408.00
IUUC-Tae-123628	Triticum aestivum	67.41	0.00e+00	1048.00
IUUC-Tur-125959	Triticum urartu	64.71	0.00e+00	906.00
IUUC-Tbe-127847	Tupaia belangeri	27.45	4.00e-10	60.10
IUUC-Ttr-128200	Tursiops truncatus	28.30	1.00e-12	68.60
IUUC-Vpa-130178	Vicugna pacos	22.46	2.00e-14	74.30
IUUC-Xtr-132699	Xenopus tropicalis	29.63	2.00e-13	71.20
IUUC-Xma-133180	Xiphophorus maculatus	26.54	7.00e-13	68.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence