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Tag Content
UUCD2 ID IUUC-Gma-043894
UUCD1 version UUC-GlM-02900
Ensembl Protein ID GLYMA10G34310.1
UniProt Accession I1LCN7; I1LCN7_SOYBN
Genbank Protein ID KRH34689.1
Protein Name Coatomer subunit alpha
Genbank Nucleotide ID CM000843
Gene Name LOC100784701; GLYMA_10G199300
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA10G34310 GLYMA10G34310.1 GLYMA10G34310.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.60e-36 124.3 50 85
UBD/Beta-Prp 4.50e-76 257.5 3 323
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H ++v++++f ++ +l+vsG+dD +ikvW+++ +++
   Q: 50   HDGPVRGVHFhHSqPLFVSGGDDYKIKVWNYKLHRC 85
           99*********445****************876666 PP
   

   UBD/Beta-Prp
   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           t +++++++++ + f+p++++++++  +g i++wd+++g+l+ ++ +h+++v+ v f+++++++v+g++D+ ikvw+++   c+ tl gh d++
   Q: 3    TKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDKFDEHDGPVRGVHFHHSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYI 96
           67889999************************************************************************************** PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......................... 166
           ++++f+ ++ ++vs+s+d+tir+w++++++c++ +l+gh++ v+c+ +hp+++l+vs+slD+tvr+Wd+                         
   Q: 97   RTVQFHHENPWIVSASDDQTIRIWNWQSRTCIS-VLTGHNHYVMCALFHPKEDLVVSASLDQTVRVWDIsslkrksaspaddilrlsqmntdlf 189
           *********************************.**************************************************7776666666 PP
   S: 167  ..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
               + + + l+g h++ v++ sf+++ + +vs+++d++vklw +  ++   v+tl+gh +nv++v f+ +++++vs s+D+siriWd ++++ 
   Q: 190  ggVDAVVKYVLEG-HDRGVNWASFHPTLPLIVSAADDRQVKLWRMNDTKAweVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTG 282
           6333334444466.********************************777668****************************************** PP
   S: 257  lktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkknep 299
           ++t+ +++++++  a+ +++ n l++g  ds   ++kl++++p
   Q: 283  IQTFRREHDRFWILAA-HPEMNLLAAG-HDSGMIVFKLERERP 323
           ****************.6666655555.689999999988765 PP
   
Organism Glycine max
Functional Description
(View)

Functional Description


     The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
 The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
Protein Sequence
(Fasta)
MLTKFETKSN RVKGLSFHPK RPWILASLHS GVIQLWDYRM GTLIDKFDEH DGPVRGVHFH 60
HSQPLFVSGG DDYKIKVWNY KLHRCLFTLL GHLDYIRTVQ FHHENPWIVS ASDDQTIRIW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Gma-043894|E3,WD_repeat;UBD,Beta-Prp|Glycine max
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGAAGTTTGA AGCCCAACAA CAAAAAAAAA AGGAGGTATA TATACAGACC CGAATCAGCA 60
CGCACACTAT AGTAAACTGG GGGATATGCT CGATTCGAGG GTGACGAGGG ATAGCAGATC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Gma-043894|E3,WD_repeat;UBD,Beta-Prp|Glycine max
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0813--Transport
KW-0853--WD repeat
Interpro

IPR024977--Apc4_WD40_dom
IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR011048--Haem_d1
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF12894--ANAPC4_WD40
PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER
KEGG gmx:100784701
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000064 Aegilops tauschii 76.65 0.00e+00 1957.00
IUUC-Ago-007992 Ashbya gossypii 43.18 0.00e+00 960.00
IUUC-Acl-008027 Aspergillus clavatus 48.21 0.00e+00 1128.00
IUUC-Afl-008644 Aspergillus flavus 48.33 0.00e+00 1123.00
IUUC-Afu-008964 Aspergillus fumigatus 48.30 0.00e+00 1139.00
IUUC-Ani-009379 Aspergillus nidulans 55.66 0.00e+00 984.00
IUUC-Ang-009756 Aspergillus niger 48.28 0.00e+00 1137.00
IUUC-Aor-010174 Aspergillus oryzae 48.33 0.00e+00 1123.00
IUUC-Ame-011229 Astyanax mexicanus 54.01 0.00e+00 1328.00
IUUC-Bdi-014549 Brachypodium distachyon 76.09 0.00e+00 1972.00
IUUC-Bol-015925 Brassica oleracea 81.59 0.00e+00 1997.00
IUUC-Bra-016978 Brassica rapa 81.82 0.00e+00 2013.00
IUUC-Cel-018115 Caenorhabditis elegans 55.53 0.00e+00 941.00
IUUC-Cja-019107 Callithrix jacchus 54.41 0.00e+00 1348.00
IUUC-Cgl-026510 Colletotrichum gloeosporioides 54.39 0.00e+00 976.00
IUUC-Dre-027421 Danio rerio 54.73 0.00e+00 1348.00
IUUC-Dor-030290 Dipodomys ordii 52.99 2.00e-163 570.00
IUUC-Dse-031543 Dothistroma septosporum 46.61 0.00e+00 1073.00
IUUC-Dme-031945 Drosophila melanogaster 61.01 0.00e+00 1025.00
IUUC-Ete-032873 Echinops telfairi 52.81 0.00e+00 1213.00
IUUC-Eca-033773 Equus caballus 54.17 0.00e+00 1332.00
IUUC-Fox-037738 Fusarium oxysporum 47.36 0.00e+00 1147.00
IUUC-Fso-038153 Fusarium solani 47.16 0.00e+00 1132.00
IUUC-Ggr-039931 Gaeumannomyces graminis 53.96 0.00e+00 963.00
IUUC-Gac-041318 Gasterosteus aculeatus 54.57 0.00e+00 1353.00
IUUC-Hvu-047556 Hordeum vulgare 76.58 0.00e+00 1980.00
IUUC-Kpa-049256 Komagataella pastoris 45.26 0.00e+00 1050.00
IUUC-Lch-049706 Latimeria chalumnae 54.33 0.00e+00 1351.00
IUUC-Lpe-051316 Leersia perrieri 77.05 0.00e+00 1960.00
IUUC-Mcc-055836 Macaca mulatta 54.74 0.00e+00 1366.00
IUUC-Meu-056238 Macropus eugenii 56.66 0.00e+00 767.00
IUUC-Mor-057172 Magnaporthe oryzae 46.10 0.00e+00 1109.00
IUUC-Mpo-057300 Magnaporthe poae 47.15 0.00e+00 1108.00
IUUC-Mtr-058248 Medicago truncatula 92.69 0.00e+00 2277.00
IUUC-Mga-059499 Meleagris gallopavo 54.76 0.00e+00 1361.00
IUUC-Mvi-060336 Microbotryum violaceum 51.94 0.00e+00 1226.00
IUUC-Mdo-062594 Monodelphis domestica 55.62 0.00e+00 1391.00
IUUC-Mmu-063736 Mus musculus 54.57 0.00e+00 1361.00
IUUC-Ncr-068892 Neurospora crassa 47.60 0.00e+00 1122.00
IUUC-Nle-069634 Nomascus leucogenys 66.17 0.00e+00 939.00
IUUC-Ont-072488 Oreochromis niloticus 54.37 0.00e+00 1337.00
IUUC-Ocu-074211 Oryctolagus cuniculus 55.05 0.00e+00 1369.00
IUUC-Oba-075761 Oryza barthii 77.03 0.00e+00 1947.00
IUUC-Obr-076429 Oryza brachyantha 76.82 0.00e+00 1951.00
IUUC-Ogl-077364 Oryza glaberrima 77.21 0.00e+00 1952.00
IUUC-Ogu-078257 Oryza glumaepatula 77.17 0.00e+00 1894.00
IUUC-Oin-080029 Oryza indica 77.54 0.00e+00 1954.00
IUUC-Olo-080895 Oryza longistaminata 84.21 0.00e+00 1484.00
IUUC-Ome-081668 Oryza meridionalis 83.98 0.00e+00 1261.00
IUUC-Oni-082608 Oryza nivara 77.46 0.00e+00 1951.00
IUUC-Opu-083697 Oryza punctata 77.46 0.00e+00 1960.00
IUUC-Oru-084274 Oryza rufipogon 77.13 0.00e+00 1950.00
IUUC-Osa-085841 Oryza sativa 77.46 0.00e+00 1956.00
IUUC-Ola-086921 Oryzias latipes 54.08 0.00e+00 1334.00
IUUC-Olu-087639 Ostreococcus lucimarinus 62.21 0.00e+00 1541.00
IUUC-Ptr-090808 Pan troglodytes 54.82 0.00e+00 1369.00
IUUC-Pan-092475 Papio anubis 55.09 0.00e+00 1370.00
IUUC-Psi-093044 Pelodiscus sinensis 54.82 0.00e+00 885.00
IUUC-Pno-094839 Phaeosphaeria nodorum 46.36 0.00e+00 1055.00
IUUC-Pfo-097493 Poecilia formosa 54.70 0.00e+00 1338.00
IUUC-Pca-100413 Procavia capensis 60.97 0.00e+00 689.00
IUUC-Pgr-103376 Puccinia graminis 50.36 0.00e+00 1233.00
IUUC-Ptt-103978 Puccinia triticina 44.69 0.00e+00 1009.00
IUUC-Pte-104126 Pyrenophora teres 53.90 0.00e+00 939.00
IUUC-Rno-105428 Rattus norvegicus 54.81 0.00e+00 1366.00
IUUC-Sha-107301 Sarcophilus harrisii 54.90 0.00e+00 1355.00
IUUC-Spo-108217 Schizosaccharomyces pombe 45.45 0.00e+00 1065.00
IUUC-Ssl-108643 Sclerotinia sclerotiorum 46.79 0.00e+00 1116.00
IUUC-Smo-109582 Selaginella moellendorffii 75.47 0.00e+00 1387.00
IUUC-Sit-109697 Setaria italica 77.31 0.00e+00 1954.00
IUUC-Sly-111759 Solanum lycopersicum 82.69 0.00e+00 2095.00
IUUC-Stu-112564 Solanum tuberosum 82.61 0.00e+00 2088.00
IUUC-Sbi-114388 Sorghum bicolor 76.72 0.00e+00 1948.00
IUUC-Sre-115209 Sporisorium reilianum 55.42 0.00e+00 994.00
IUUC-Tru-117772 Takifugu rubripes 53.93 0.00e+00 1307.00
IUUC-Tsy-119105 Tarsius syrichta 52.04 0.00e+00 1041.00
IUUC-Tni-120556 Tetraodon nigroviridis 42.87 0.00e+00 905.00
IUUC-Tre-121951 Trichoderma reesei 47.20 0.00e+00 1108.00
IUUC-Tvi-122359 Trichoderma virens 47.08 0.00e+00 1127.00
IUUC-Tae-125527 Triticum aestivum 76.89 0.00e+00 1967.00
IUUC-Tur-126754 Triticum urartu 75.57 0.00e+00 1920.00
IUUC-Tme-127170 Tuber melanosporum 48.33 0.00e+00 1179.00
IUUC-Uma-129337 Ustilago maydis 56.02 0.00e+00 997.00
IUUC-Vda-129828 Verticillium dahliae 46.43 0.00e+00 1106.00
IUUC-Xtr-132857 Xenopus tropicalis 53.09 0.00e+00 1277.00
IUUC-Xma-133138 Xiphophorus maculatus 54.70 0.00e+00 1340.00
IUUC-Zma-135612 Zea mays 75.82 0.00e+00 1952.00
Created Date 25-Jun-2017

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