iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssl-108643

Ensembl Protein ID

EDN95254

UniProt Accession

A7F0L2; A7F0L2_SCLS1

Genbank Protein ID

APA14046.1; EDN95254.1

Protein Name

Coatomer subunit alpha

Genbank Nucleotide ID

CP017825; CH476637

Gene Name

SS1G_11130; sscle_12g088160

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SS1G_11130	EDN95254	EDN95254

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-33	110.2	60	96
UBD/Beta-Prp	1.30e-76	256.7	12	338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  + +l+vsG+dD +ikvW+l t ++l
   Q: 60   HDGPVRGIDFhKTqPLFVSGGDDYKIKVWSLQTRRCL 96
           99*********4459****************999997 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
            t +++++s+ + ++f+p++++++++  ++ti++wd+++g+l+ ++++h+++v+ ++f+++++++v+g++D+ ikvw+l+t+ c+ tl+gh d+v+++ f+
   Q: 12   LTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHKTQPLFVSGGDDYKIKVWSLQTRRCLFTLNGHLDYVRTVFFH 112
           67889999********************************************************************************************* PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl...............................ktgkllr 173
            +  +++s s+d+tir+w++++++ +  t +gh++ ++c+++hp+++l+vs+slD+ vr+Wd+                               +t+ +++
   Q: 113  HELPWIISSSDDQTIRIWNWQNRSLIC-TMTGHNHYTMCAQFHPKDDLVVSASLDQSVRVWDIsglrkkhsaptsmtfedqmsrgnqaqadmfgNTDAVVK 212
           **************************9.***************************************************************9987777777 PP
   S: 174  tltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav 272
              +gh++ v++++f+++ + +vs+++d+ vklw +++++   v+t++gh +n +   f+p++++++s+++D++ir+Wdl +++ +++++++n++++ +a+
   Q: 213  FVLEGHDRGVNWVAFHPTLPLIVSAGDDRLVKLWRMSETKAweVDTCRGHFQNASGCLFHPHQDLILSVGEDKTIRVWDLNKRTSVQSFKRENDRFWVIAA 313
           66777********************************888778********************************************************** PP
   S: 273  lsfgdnvlvlgsedskvniwklkknep 299
            +++ n +++g  d+ v+++kl++++p
   Q: 314  -HPEINLFAAG-HDNGVMVFKLERERP 338
           .6666555555.478*******98775 PP

Organism

Sclerotinia sclerotiorum

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.

Protein Sequence
(Fasta)

MASNSNSSPT MLTKFESKSS RAKGIAFHPK RPWILVSLHS STIQLWDYRM GTLIDRFEEH 60
DGPVRGIDFH KTQPLFVSGG DDYKIKVWSL QTRRCLFTLN GHLDYVRTVF FHHELPWIIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCTA ATTCCAATTC CTCCCCTACA ATGTTGACGA AGGTATGTCG CGCTTCATAC 60
TCTGAGCTTG AGACATTCAA TCAGATGGGC TACAGTACTA ATACTCCCAT AAGTTTGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011048--Haem_d1
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

KEGG

ssl:SS1G_11130

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000064	Aegilops tauschii	47.13	0.00e+00	1125.00
IUUC-Aml-001758	Ailuropoda melanoleuca	49.28	0.00e+00	1222.00
IUUC-Atr-002493	Amborella trichopoda	55.70	0.00e+00	960.00
IUUC-Apl-003385	Anas platyrhynchos	43.99	0.00e+00	910.00
IUUC-Aca-005154	Anolis carolinensis	71.84	3.00e-93	332.00
IUUC-Aly-006020	Arabidopsis lyrata	55.46	0.00e+00	966.00
IUUC-Ath-007360	Arabidopsis thaliana	47.36	0.00e+00	1115.00
IUUC-Ago-007992	Ashbya gossypii	50.70	0.00e+00	1228.00
IUUC-Acl-008027	Aspergillus clavatus	79.28	0.00e+00	1959.00
IUUC-Afl-008644	Aspergillus flavus	79.36	0.00e+00	1966.00
IUUC-Afu-008964	Aspergillus fumigatus	79.69	0.00e+00	2000.00
IUUC-Ani-009379	Aspergillus nidulans	84.38	0.00e+00	1536.00
IUUC-Ang-009756	Aspergillus niger	79.36	0.00e+00	1978.00
IUUC-Aor-010174	Aspergillus oryzae	79.28	0.00e+00	1964.00
IUUC-Ate-010302	Aspergillus terreus	78.45	0.00e+00	2000.00
IUUC-Ame-011229	Astyanax mexicanus	48.70	0.00e+00	1194.00
IUUC-Bgr-012300	Blumeria graminis	83.12	0.00e+00	2069.00
IUUC-Bta-012524	Bos taurus	49.64	0.00e+00	1216.00
IUUC-Bci-013781	Botrytis cinerea	98.20	0.00e+00	2418.00
IUUC-Bdi-014549	Brachypodium distachyon	46.89	0.00e+00	1123.00
IUUC-Bol-015967	Brassica oleracea	48.87	0.00e+00	1060.00
IUUC-Bra-016978	Brassica rapa	55.46	0.00e+00	965.00
IUUC-Cel-018115	Caenorhabditis elegans	52.26	0.00e+00	901.00
IUUC-Cja-019107	Callithrix jacchus	47.99	0.00e+00	1196.00
IUUC-Cfa-020675	Canis familiaris	48.98	0.00e+00	1195.00
IUUC-Cpo-021813	Cavia porcellus	49.52	0.00e+00	1226.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	57.23	0.00e+00	1008.00
IUUC-Csa-023523	Chlorocebus sabaeus	49.31	0.00e+00	1231.00
IUUC-Cho-024704	Choloepus hoffmanni	62.62	4.00e-121	427.00
IUUC-Cin-025572	Ciona intestinalis	47.43	0.00e+00	1181.00
IUUC-Csv-025864	Ciona savignyi	54.53	0.00e+00	943.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	84.07	0.00e+00	2095.00
IUUC-Cne-027053	Cryptococcus neoformans	56.22	0.00e+00	1358.00
IUUC-Cme-027222	Cyanidioschyzon merolae	39.85	1.00e-142	499.00
IUUC-Dre-027421	Danio rerio	49.35	0.00e+00	1221.00
IUUC-Dno-029303	Dasypus novemcinctus	49.56	0.00e+00	1229.00
IUUC-Dor-030290	Dipodomys ordii	47.02	8.00e-148	516.00
IUUC-Dse-031543	Dothistroma septosporum	76.15	0.00e+00	1835.00
IUUC-Dme-031945	Drosophila melanogaster	55.64	0.00e+00	949.00
IUUC-Ete-032873	Echinops telfairi	47.35	0.00e+00	1069.00
IUUC-Eca-033773	Equus caballus	48.36	0.00e+00	1180.00
IUUC-Eeu-034874	Erinaceus europaeus	37.07	2.00e-166	578.00
IUUC-Fca-035739	Felis catus	48.72	0.00e+00	1204.00
IUUC-Fal-037263	Ficedula albicollis	45.99	0.00e+00	1073.00
IUUC-Fox-037738	Fusarium oxysporum	82.51	0.00e+00	2132.00
IUUC-Fso-038153	Fusarium solani	82.35	0.00e+00	2131.00
IUUC-Gmo-039602	Gadus morhua	46.68	0.00e+00	1120.00
IUUC-Ggr-039931	Gaeumannomyces graminis	83.59	0.00e+00	2055.00
IUUC-Gga-040590	Gallus gallus	49.15	0.00e+00	1223.00
IUUC-Gac-041318	Gasterosteus aculeatus	48.39	0.00e+00	1196.00
IUUC-Gma-043894	Glycine max	46.95	0.00e+00	1122.00
IUUC-Ggo-045029	Gorilla gorilla	48.96	0.00e+00	1225.00
IUUC-Hsa-046078	Homo sapiens	48.88	0.00e+00	1224.00
IUUC-Hvu-047556	Hordeum vulgare	47.78	0.00e+00	1130.00
IUUC-Itr-048881	Ictidomys tridecemlineatus	41.26	0.00e+00	664.00
IUUC-Kpa-049256	Komagataella pastoris	53.55	0.00e+00	1348.00
IUUC-Lch-049706	Latimeria chalumnae	49.76	0.00e+00	1206.00
IUUC-Lpe-051316	Leersia perrieri	55.22	0.00e+00	968.00
IUUC-Loc-051867	Lepisosteus oculatus	38.07	0.00e+00	792.00
IUUC-Lma-053138	Leptosphaeria maculans	77.49	0.00e+00	1941.00
IUUC-Laf-053510	Loxodonta africana	48.99	0.00e+00	1227.00
IUUC-Mcc-055836	Macaca mulatta	49.28	0.00e+00	1227.00
IUUC-Meu-056238	Macropus eugenii	51.47	0.00e+00	706.00
IUUC-Mor-057172	Magnaporthe oryzae	83.02	0.00e+00	2120.00
IUUC-Mpo-057300	Magnaporthe poae	83.17	0.00e+00	2083.00
IUUC-Mtr-058248	Medicago truncatula	47.04	0.00e+00	1132.00
IUUC-Mla-059019	Melampsora laricipopulina	56.63	0.00e+00	1411.00
IUUC-Mga-059499	Meleagris gallopavo	49.15	0.00e+00	1219.00
IUUC-Mvi-060336	Microbotryum violaceum	55.04	0.00e+00	1384.00
IUUC-Mmr-061102	Microcebus murinus	48.92	0.00e+00	1217.00
IUUC-Mdo-062594	Monodelphis domestica	49.64	0.00e+00	1239.00
IUUC-Mmu-063736	Mus musculus	49.12	0.00e+00	1219.00
IUUC-Mac-065219	Musa acuminata	53.99	0.00e+00	868.00
IUUC-Mpu-066701	Mustela putorius furo	48.99	0.00e+00	1219.00
IUUC-Mlu-067392	Myotis lucifugus	49.00	0.00e+00	1222.00
IUUC-Nfi-068270	Neosartorya fischeri	79.44	0.00e+00	1971.00
IUUC-Ncr-068892	Neurospora crassa	82.64	0.00e+00	2090.00
IUUC-Nle-069634	Nomascus leucogenys	60.00	0.00e+00	873.00
IUUC-Opr-070952	Ochotona princeps	37.76	9.00e-165	572.00
IUUC-Ont-072488	Oreochromis niloticus	48.30	0.00e+00	1185.00
IUUC-Oan-073416	Ornithorhynchus anatinus	23.92	2.00e-66	244.00
IUUC-Ocu-074211	Oryctolagus cuniculus	49.39	0.00e+00	1225.00
IUUC-Oba-075761	Oryza barthii	55.34	0.00e+00	969.00
IUUC-Obr-076429	Oryza brachyantha	55.11	0.00e+00	971.00
IUUC-Ogl-077364	Oryza glaberrima	55.34	0.00e+00	970.00
IUUC-Ogu-078257	Oryza glumaepatula	55.22	0.00e+00	966.00
IUUC-Oin-079274	Oryza indica	55.22	0.00e+00	968.00
IUUC-Olo-080466	Oryza longistaminata	55.49	0.00e+00	961.00
IUUC-Ome-081993	Oryza meridionalis	57.49	0.00e+00	925.00
IUUC-Oni-082874	Oryza nivara	55.34	0.00e+00	969.00
IUUC-Opu-083697	Oryza punctata	46.80	0.00e+00	1117.00
IUUC-Oru-084274	Oryza rufipogon	55.22	0.00e+00	968.00
IUUC-Osa-085565	Oryza sativa	55.22	0.00e+00	968.00
IUUC-Ola-086921	Oryzias latipes	48.12	0.00e+00	1192.00
IUUC-Olu-087639	Ostreococcus lucimarinus	49.12	0.00e+00	1181.00
IUUC-Oga-087991	Otolemur garnettii	47.42	0.00e+00	1147.00
IUUC-Oar-089590	Ovis aries	49.72	0.00e+00	1231.00
IUUC-Ptr-090808	Pan troglodytes	48.88	0.00e+00	1223.00
IUUC-Pan-092475	Papio anubis	49.03	0.00e+00	1221.00
IUUC-Psi-093044	Pelodiscus sinensis	51.88	0.00e+00	850.00
IUUC-Pma-094695	Petromyzon marinus	23.64	1.00e-65	243.00
IUUC-Pno-094839	Phaeosphaeria nodorum	76.84	0.00e+00	1849.00
IUUC-Ppa-095785	Physcomitrella patens	50.16	0.00e+00	1216.00
IUUC-Pfo-097493	Poecilia formosa	48.38	0.00e+00	1196.00
IUUC-Pab-098497	Pongo abelii	49.23	0.00e+00	1232.00
IUUC-Pop-099992	Populus trichocarpa	55.94	0.00e+00	971.00
IUUC-Pca-100413	Procavia capensis	53.76	0.00e+00	626.00
IUUC-Ppe-101899	Prunus persica	56.18	0.00e+00	982.00
IUUC-Pva-102126	Pteropus vampyrus	47.43	0.00e+00	1156.00
IUUC-Pgr-103376	Puccinia graminis	56.35	0.00e+00	1431.00
IUUC-Ptt-103978	Puccinia triticina	50.88	0.00e+00	1212.00
IUUC-Pte-104126	Pyrenophora teres	75.92	0.00e+00	1842.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	69.14	0.00e+00	1423.00
IUUC-Rno-105428	Rattus norvegicus	49.64	0.00e+00	1228.00
IUUC-Sce-106464	Saccharomyces cerevisiae	49.88	0.00e+00	1203.00
IUUC-Sha-107301	Sarcophilus harrisii	49.26	0.00e+00	1207.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	52.29	0.00e+00	1327.00
IUUC-Spo-108217	Schizosaccharomyces pombe	54.48	0.00e+00	1400.00
IUUC-Smo-109582	Selaginella moellendorffii	56.44	0.00e+00	999.00
IUUC-Sit-109697	Setaria italica	55.10	0.00e+00	967.00
IUUC-Sly-111759	Solanum lycopersicum	47.44	0.00e+00	1136.00
IUUC-Stu-112564	Solanum tuberosum	47.27	0.00e+00	1136.00
IUUC-Sar-113313	Sorex araneus	40.00	1.00e-157	548.00
IUUC-Sbi-114388	Sorghum bicolor	47.37	0.00e+00	1129.00
IUUC-Sre-115209	Sporisorium reilianum	61.92	0.00e+00	1122.00
IUUC-Ssc-115933	Sus scrofa	49.64	0.00e+00	1229.00
IUUC-Tgu-117109	Taeniopygia guttata	43.80	2.00e-92	330.00
IUUC-Tru-117772	Takifugu rubripes	48.23	0.00e+00	1172.00
IUUC-Tsy-119105	Tarsius syrichta	47.57	0.00e+00	936.00
IUUC-Tni-120556	Tetraodon nigroviridis	38.00	0.00e+00	773.00
IUUC-Tca-120918	Theobroma cacao	56.06	0.00e+00	979.00
IUUC-Tre-121951	Trichoderma reesei	81.62	0.00e+00	2043.00
IUUC-Tvi-122359	Trichoderma virens	81.28	0.00e+00	2080.00
IUUC-Tae-125527	Triticum aestivum	47.04	0.00e+00	1124.00
IUUC-Tur-126754	Triticum urartu	47.45	0.00e+00	1118.00
IUUC-Tme-127170	Tuber melanosporum	76.87	0.00e+00	1971.00
IUUC-Tbe-127882	Tupaia belangeri	62.50	4.00e-121	427.00
IUUC-Ttr-128217	Tursiops truncatus	47.83	0.00e+00	1160.00
IUUC-Uma-129337	Ustilago maydis	61.57	0.00e+00	1114.00
IUUC-Vda-129828	Verticillium dahliae	80.51	0.00e+00	2042.00
IUUC-Vpa-130537	Vicugna pacos	48.96	0.00e+00	1211.00
IUUC-Vvi-130958	Vitis vinifera	56.06	0.00e+00	981.00
IUUC-Xtr-132857	Xenopus tropicalis	47.76	0.00e+00	1137.00
IUUC-Xma-133138	Xiphophorus maculatus	48.78	0.00e+00	1197.00
IUUC-Yli-134399	Yarrowia lipolytica	61.25	0.00e+00	1086.00
IUUC-Zma-135612	Zea mays	47.01	0.00e+00	1123.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence