iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013109

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02055357

Gene Name

RNF5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000025413.3	ENSBTAT00000035701.3	ENSBTAP00000035571.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.80e-07	31.1	27	68

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle  ++  +v  CgH+++  Cl++w         ++ CP+C+
   Q: 27   CNICLETARE-AVVSVCGHLYCWPCLHQW---LETRPERQECPVCK 68
           99******88.888***************...555888889****7 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAAAEEEDGG PEGPNRERGG AGATFECNIC LETAREAVVS VCGHLYCWPC LHQWLETRPE 60
RQECPVCKAG ISRENVVPLY GRGSQKPQDP RLKTPPRPQG QRPAPESRGG FQPFGDTGGF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGGGGACGA AAGAGTACCG GCCATGGCAG CAGCGGAGGA GGAGGACGGG GGCCCCGAAG 60
GGCCAAACCG CGAGCGGGGA GGGGCGGGCG CGACCTTCGA ATGTAATATT TGTCTGGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0010507--P:negative regulation of autophagy
GO:0031648--P:protein destabilization
GO:0070936--P:protein K48-linked ubiquitination
GO:0070534--P:protein K63-linked ubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:2000785--P:regulation of autophagosome assembly
GO:0009617--P:response to bacterium

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001417	Ailuropoda melanoleuca	98.43	6.00e-71	259.00
IUUC-Aca-004254	Anolis carolinensis	74.71	1.00e-35	141.00
IUUC-Ame-011316	Astyanax mexicanus	70.13	5.00e-57	213.00
IUUC-Bgr-012234	Blumeria graminis	37.04	4.00e-09	55.80
IUUC-Bci-013613	Botrytis cinerea	35.71	7.00e-09	54.70
IUUC-Bdi-014313	Brachypodium distachyon	53.49	5.00e-23	100.00
IUUC-Bol-016132	Brassica oleracea	42.86	2.00e-26	112.00
IUUC-Bra-017631	Brassica rapa	42.25	4.00e-26	111.00
IUUC-Cja-019902	Callithrix jacchus	97.87	6.00e-79	286.00
IUUC-Cfa-020079	Canis familiaris	97.87	6.00e-79	286.00
IUUC-Cpo-021320	Cavia porcellus	92.22	2.00e-86	311.00
IUUC-Csa-023595	Chlorocebus sabaeus	97.87	2.00e-79	287.00
IUUC-Dre-027716	Danio rerio	73.33	6.00e-42	163.00
IUUC-Dno-029843	Dasypus novemcinctus	87.23	3.00e-57	213.00
IUUC-Dor-030170	Dipodomys ordii	97.58	5.00e-69	253.00
IUUC-Eca-033642	Equus caballus	98.78	2.00e-92	330.00
IUUC-Eeu-034778	Erinaceus europaeus	98.29	5.00e-64	235.00
IUUC-Fca-036326	Felis catus	96.45	2.00e-78	284.00
IUUC-Fso-038195	Fusarium solani	38.57	2.00e-10	60.10
IUUC-Gac-042258	Gasterosteus aculeatus	79.20	2.00e-55	207.00
IUUC-Ggo-045474	Gorilla gorilla	98.58	1.00e-79	288.00
IUUC-Hsa-046046	Homo sapiens	98.58	1.00e-79	288.00
IUUC-Hvu-047148	Hordeum vulgare	53.01	4.00e-23	102.00
IUUC-Itr-048037	Ictidomys tridecemlineatus	97.33	5.00e-84	303.00
IUUC-Lch-050367	Latimeria chalumnae	70.83	1.00e-45	174.00
IUUC-Lpe-051034	Leersia perrieri	44.53	4.00e-25	107.00
IUUC-Lma-053179	Leptosphaeria maculans	38.33	1.00e-10	60.50
IUUC-Laf-053395	Loxodonta africana	96.45	5.00e-78	283.00
IUUC-Mcc-054833	Macaca mulatta	97.87	2.00e-79	287.00
IUUC-Meu-055984	Macropus eugenii	84.81	2.00e-35	141.00
IUUC-Mdo-062437	Monodelphis domestica	87.20	4.00e-82	296.00
IUUC-Mmu-064159	Mus musculus	96.48	4.00e-79	286.00
IUUC-Mac-065053	Musa acuminata	56.47	3.00e-23	102.00
IUUC-Mlu-067689	Myotis lucifugus	91.36	5.00e-83	299.00
IUUC-Nle-069705	Nomascus leucogenys	98.58	1.00e-79	288.00
IUUC-Opr-070392	Ochotona princeps	43.97	2.00e-20	90.90
IUUC-Ont-072482	Oreochromis niloticus	73.43	8.00e-58	216.00
IUUC-Ocu-074208	Oryctolagus cuniculus	97.87	6.00e-79	286.00
IUUC-Oba-075461	Oryza barthii	51.65	1.00e-23	103.00
IUUC-Obr-076382	Oryza brachyantha	55.81	2.00e-24	105.00
IUUC-Ogl-077553	Oryza glaberrima	55.21	8.00e-26	110.00
IUUC-Oin-080177	Oryza indica	55.21	8.00e-26	110.00
IUUC-Olo-080378	Oryza longistaminata	53.49	5.00e-23	100.00
IUUC-Ome-081605	Oryza meridionalis	55.21	7.00e-26	110.00
IUUC-Oni-082458	Oryza nivara	55.21	2.00e-25	110.00
IUUC-Opu-083362	Oryza punctata	56.98	4.00e-25	108.00
IUUC-Oru-084757	Oryza rufipogon	54.00	3.00e-26	111.00
IUUC-Osa-086198	Oryza sativa	49.56	3.00e-26	112.00
IUUC-Ola-086507	Oryzias latipes	67.88	4.00e-60	223.00
IUUC-Olu-087623	Ostreococcus lucimarinus	49.25	2.00e-16	78.20
IUUC-Oga-088912	Otolemur garnettii	99.29	4.00e-80	290.00
IUUC-Oar-090284	Ovis aries	96.64	1.00e-72	265.00
IUUC-Ptr-090919	Pan troglodytes	98.41	3.00e-70	256.00
IUUC-Pan-092843	Papio anubis	97.87	2.00e-79	287.00
IUUC-Pno-095101	Phaeosphaeria nodorum	36.67	1.00e-09	57.00
IUUC-Pfo-096818	Poecilia formosa	78.57	4.00e-56	210.00
IUUC-Pab-098244	Pongo abelii	97.87	3.00e-79	287.00
IUUC-Pop-099595	Populus trichocarpa	42.86	1.00e-26	113.00
IUUC-Pca-100319	Procavia capensis	96.95	2.00e-82	297.00
IUUC-Pva-102249	Pteropus vampyrus	93.62	6.00e-73	266.00
IUUC-Pte-104170	Pyrenophora teres	37.29	1.00e-09	57.40
IUUC-Pyt-104531	Pyrenophora triticirepentis	38.33	4.00e-10	59.30
IUUC-Rno-106042	Rattus norvegicus	96.48	4.00e-79	286.00
IUUC-Ssl-108393	Sclerotinia sclerotiorum	35.71	8.00e-09	54.70
IUUC-Smo-109079	Selaginella moellendorffii	48.19	2.00e-22	100.00
IUUC-Sly-110917	Solanum lycopersicum	51.76	2.00e-24	105.00
IUUC-Sbi-114275	Sorghum bicolor	53.49	8.00e-23	100.00
IUUC-Ssc-115934	Sus scrofa	99.29	4.00e-80	290.00
IUUC-Tru-118679	Takifugu rubripes	60.49	1.00e-22	98.60
IUUC-Tsy-119615	Tarsius syrichta	95.07	4.00e-75	273.00
IUUC-Tre-121931	Trichoderma reesei	33.33	2.00e-08	53.10
IUUC-Tae-124319	Triticum aestivum	53.49	8.00e-23	100.00
IUUC-Tur-126198	Triticum urartu	53.49	7.00e-23	100.00
IUUC-Tbe-127773	Tupaia belangeri	96.45	2.00e-76	277.00
IUUC-Ttr-128690	Tursiops truncatus	97.44	8.00e-64	235.00
IUUC-Vvi-131225	Vitis vinifera	58.82	2.00e-25	108.00
IUUC-Xtr-132608	Xenopus tropicalis	80.00	3.00e-45	174.00
IUUC-Xma-134225	Xiphophorus maculatus	78.57	3.00e-56	211.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence