iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000004586.2	ENSLACT00000005207.2	ENSLACP00000005161.2
ENSLACG00000004586.2	ENSLACT00000005206.1	ENSLACP00000005160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-22	77.8	86	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvll 36
           gHt++  ++++   +d+ ++sGs D+t+++W++ +g l+
   Q: 86   GHTAPLMDIEWcphNDNVIASGSEDCTVMIWEIPDGGLT 124
           8***********9877****************9999876 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

SVFLVSAMTP KVVRTSKFRH VFGQPMKADQ CYDDIRISQS TGDSPFCSVN PKFVAMIVEA 60
SGGGAFMVLP LSKTGRVDKA TPVVCGHTAP LMDIEWCPHN DNVIASGSED CTVMIWEIPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGGGCGCTG CCTGTCTTAA AGGCGCCGCT CCGTGCGTCT TTCCTCATTG TCTGAGAGGG 60
AGCCTCCGAG TCCAAACTCA GCCACTCTCC GGCTTCTCTC CGCACGCCCT GCGACACCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR029508--CORO1A
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0007420--P:brain development
GO:0021952--P:central nervous system projection neuron axonogenesis
GO:0001654--P:eye development
GO:0030595--P:leukocyte chemotaxis
GO:0001845--P:phagolysosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002012	Ailuropoda melanoleuca	66.74	0.00e+00	688.00
IUUC-Acl-008280	Aspergillus clavatus	43.03	8.00e-101	360.00
IUUC-Afl-008393	Aspergillus flavus	42.54	3.00e-99	355.00
IUUC-Afu-008865	Aspergillus fumigatus	40.82	5.00e-96	345.00
IUUC-Ani-009155	Aspergillus nidulans	42.29	3.00e-98	352.00
IUUC-Ang-009523	Aspergillus niger	41.21	8.00e-90	324.00
IUUC-Aor-010049	Aspergillus oryzae	42.32	7.00e-96	344.00
IUUC-Ame-011101	Astyanax mexicanus	68.30	0.00e+00	691.00
IUUC-Bta-013168	Bos taurus	67.37	0.00e+00	692.00
IUUC-Cja-019660	Callithrix jacchus	66.95	0.00e+00	693.00
IUUC-Cfa-020938	Canis familiaris	66.74	0.00e+00	690.00
IUUC-Cpo-022056	Cavia porcellus	67.16	0.00e+00	693.00
IUUC-Csa-023193	Chlorocebus sabaeus	67.16	0.00e+00	692.00
IUUC-Cin-025202	Ciona intestinalis	32.40	7.00e-58	219.00
IUUC-Csv-026184	Ciona savignyi	40.74	1.00e-87	316.00
IUUC-Cne-026773	Cryptococcus neoformans	37.83	2.00e-83	303.00
IUUC-Dre-028167	Danio rerio	67.45	0.00e+00	681.00
IUUC-Dno-029363	Dasypus novemcinctus	67.16	0.00e+00	689.00
IUUC-Dor-030426	Dipodomys ordii	67.80	0.00e+00	692.00
IUUC-Dse-031378	Dothistroma septosporum	41.34	4.00e-90	325.00
IUUC-Eca-034229	Equus caballus	65.89	0.00e+00	683.00
IUUC-Eeu-034499	Erinaceus europaeus	66.59	1.00e-171	595.00
IUUC-Fca-036472	Felis catus	67.37	0.00e+00	692.00
IUUC-Gmo-039519	Gadus morhua	64.04	0.00e+00	661.00
IUUC-Gac-042545	Gasterosteus aculeatus	68.51	0.00e+00	694.00
IUUC-Ggo-045162	Gorilla gorilla	66.74	0.00e+00	689.00
IUUC-Hsa-046874	Homo sapiens	66.74	0.00e+00	689.00
IUUC-Itr-048911	Ictidomys tridecemlineatus	66.95	0.00e+00	692.00
IUUC-Laf-053427	Loxodonta africana	67.16	0.00e+00	681.00
IUUC-Meu-056083	Macropus eugenii	66.67	0.00e+00	677.00
IUUC-Mla-058883	Melampsora laricipopulina	42.25	1.00e-84	307.00
IUUC-Mvi-060569	Microbotryum violaceum	38.40	9.00e-84	304.00
IUUC-Mmr-060858	Microcebus murinus	66.95	0.00e+00	692.00
IUUC-Mdo-062469	Monodelphis domestica	66.38	0.00e+00	688.00
IUUC-Mpu-066451	Mustela putorius furo	68.35	0.00e+00	677.00
IUUC-Mlu-066978	Myotis lucifugus	66.24	0.00e+00	685.00
IUUC-Nfi-068476	Neosartorya fischeri	41.79	9.00e-99	353.00
IUUC-Nle-069815	Nomascus leucogenys	66.95	0.00e+00	696.00
IUUC-Opr-070911	Ochotona princeps	67.37	0.00e+00	693.00
IUUC-Ont-072391	Oreochromis niloticus	69.70	0.00e+00	701.00
IUUC-Ola-087129	Oryzias latipes	67.94	0.00e+00	694.00
IUUC-Oar-089676	Ovis aries	67.80	0.00e+00	693.00
IUUC-Ptr-091647	Pan troglodytes	66.74	0.00e+00	689.00
IUUC-Pan-092672	Papio anubis	67.16	0.00e+00	692.00
IUUC-Pva-102668	Pteropus vampyrus	66.74	0.00e+00	689.00
IUUC-Pgr-103354	Puccinia graminis	41.10	5.00e-88	318.00
IUUC-Ptt-103735	Puccinia triticina	35.50	3.00e-68	252.00
IUUC-Rno-105604	Rattus norvegicus	66.53	0.00e+00	687.00
IUUC-Sce-106378	Saccharomyces cerevisiae	40.64	8.00e-90	324.00
IUUC-Sha-107210	Sarcophilus harrisii	67.94	0.00e+00	697.00
IUUC-Sja-107992	Schizosaccharomyces japonicus	42.82	4.00e-97	348.00
IUUC-Sar-113292	Sorex araneus	75.95	4.00e-179	620.00
IUUC-Sre-114911	Sporisorium reilianum	35.92	3.00e-77	282.00
IUUC-Tru-117655	Takifugu rubripes	69.08	0.00e+00	694.00
IUUC-Tme-126924	Tuber melanosporum	41.67	4.00e-93	335.00
IUUC-Ttr-128689	Tursiops truncatus	66.31	0.00e+00	687.00
IUUC-Uma-129489	Ustilago maydis	35.37	6.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence