iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019585

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACFV01104554

Gene Name

WDR38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000006695.1	ENSCJAT00000013085.1	ENSCJAP00000012412.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-48	160.6	146	182
UBD/Beta-Prp	4.10e-70	237.3	16	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH dsv + +f ++ + l++Gs+D ti++WDlr g++
   Q: 146  GHRDSVQSSDFsPTvNCLATGSWDSTIRIWDLRAGTP 182
           8***********9999*****************9976 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
           +++g h++ +++ +fspd+++l+t+s+dg++  w++++g+ll++lsgh+++v+ ++fspdg +++++s D+t+++wd+   kc+++lkg
   Q: 16   KFFGRHSGEVSSSAFSPDGQMLLTASEDGCVYGWETRSGQLLWRLSGHTGPVKFCRFSPDGHLFASTSCDHTVRLWDMARAKCLRVLKG 104
           67899************************************************************************************ PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           h+ sv  +sfsp+++ l+sG++d+ +++w++++gq+l+ +l gh+++v++  ++p+ n+l++Gs D+t+r+Wdl+ g+
   Q: 105  HQLSVEMVSFSPDSKQLASGGWDKRVMIWEVQSGQVLR-LLVGHRDSVQSSDFSPTVNCLATGSWDSTIRIWDLRAGT 181
           **************************************.***********************************9987 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

RGHSGVPAML AVRRVKFFGR HSGEVSSSAF SPDGQMLLTA SEDGCVYGWE TRSGQLLWRL 60
SGHTGPVKFC RFSPDGHLFA STSCDHTVRL WDMARAKCLR VLKGHQLSVE MVSFSPDSKQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGCCGCCT AGGCGGGAGC CCGCCGGGTT GCGGCGGGGC CACAGCGGGG TCCCGGCCAT 60
GCTGGCCGTG CGGAGAGTGA AATTCTTTGG CCGGCACAGC GGGGAGGTGA GACCCAGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0002244--P:hematopoietic progenitor cell differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001664	Ailuropoda melanoleuca	79.35	5.00e-146	509.00
IUUC-Ame-010858	Astyanax mexicanus	47.75	3.00e-74	271.00
IUUC-Bta-012352	Bos taurus	82.29	3.00e-141	494.00
IUUC-Cfa-020062	Canis familiaris	75.34	3.00e-122	431.00
IUUC-Csa-023528	Chlorocebus sabaeus	90.10	1.00e-167	581.00
IUUC-Cin-025426	Ciona intestinalis	35.92	2.00e-52	199.00
IUUC-Dre-027740	Danio rerio	50.51	7.00e-49	186.00
IUUC-Dno-030012	Dasypus novemcinctus	68.36	1.00e-129	456.00
IUUC-Dor-030536	Dipodomys ordii	63.32	3.00e-102	364.00
IUUC-Ete-032871	Echinops telfairi	77.16	6.00e-102	363.00
IUUC-Eca-033729	Equus caballus	81.69	2.00e-143	501.00
IUUC-Eeu-034740	Erinaceus europaeus	75.73	1.00e-135	475.00
IUUC-Fca-036514	Felis catus	79.49	7.00e-146	509.00
IUUC-Ggo-044793	Gorilla gorilla	86.26	3.00e-161	560.00
IUUC-Hsa-046414	Homo sapiens	88.22	5.00e-164	570.00
IUUC-Itr-048798	Ictidomys tridecemlineatus	78.20	7.00e-126	442.00
IUUC-Lch-049905	Latimeria chalumnae	50.00	1.00e-85	309.00
IUUC-Loc-052101	Lepisosteus oculatus	51.24	6.00e-84	303.00
IUUC-Laf-053443	Loxodonta africana	76.87	2.00e-134	471.00
IUUC-Mcc-055346	Macaca mulatta	89.78	2.00e-167	581.00
IUUC-Meu-056531	Macropus eugenii	62.23	6.00e-80	290.00
IUUC-Mmr-061721	Microcebus murinus	83.62	9.00e-146	509.00
IUUC-Mdo-062379	Monodelphis domestica	61.30	1.00e-104	373.00
IUUC-Mmu-064175	Mus musculus	74.48	1.00e-128	452.00
IUUC-Mpu-066361	Mustela putorius furo	81.69	2.00e-142	498.00
IUUC-Mlu-067300	Myotis lucifugus	60.67	9.00e-93	333.00
IUUC-Nle-070150	Nomascus leucogenys	88.54	6.00e-158	549.00
IUUC-Opr-071060	Ochotona princeps	70.37	1.00e-110	392.00
IUUC-Ocu-074101	Oryctolagus cuniculus	78.78	4.00e-143	501.00
IUUC-Oga-088479	Otolemur garnettii	82.99	6.00e-144	503.00
IUUC-Oar-089608	Ovis aries	82.52	4.00e-140	491.00
IUUC-Ptr-091521	Pan troglodytes	89.46	8.00e-168	582.00
IUUC-Pan-092092	Papio anubis	89.46	8.00e-167	579.00
IUUC-Pab-098454	Pongo abelii	90.10	3.00e-168	583.00
IUUC-Pca-100981	Procavia capensis	78.85	4.00e-147	513.00
IUUC-Pva-102491	Pteropus vampyrus	77.88	5.00e-142	496.00
IUUC-Rno-105417	Rattus norvegicus	76.53	3.00e-126	444.00
IUUC-Sha-107649	Sarcophilus harrisii	63.45	2.00e-109	389.00
IUUC-Sar-113110	Sorex araneus	63.73	2.00e-80	292.00
IUUC-Ssc-116197	Sus scrofa	77.88	1.00e-143	502.00
IUUC-Tbe-127734	Tupaia belangeri	81.21	1.00e-78	286.00
IUUC-Ttr-128709	Tursiops truncatus	75.08	4.00e-135	474.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence