iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000044820.6	ENSDART00000121847.3	ENSDARP00000109556.2
ENSDARG00000044820.6	ENSDART00000065877.5	ENSDARP00000065876.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-27	93.6	172	202
UBD/Beta-Prp	2.80e-71	241.1	102	428

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H d+vtcl+f ++  +l+sGs+D t+k++D+
   Q: 172  HVDEVTCLSFhPTeQILASGSRDYTLKLFDY 202
           9**********77799**************7 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.......................lrslsgheaevtavkfspdgkilvt 69
           ++ ++hk+++++ ++s+d++l+atgs+d++ik+ d++++ +                       +r+l++h +evt+++f+p+++il++
   Q: 102  CYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAksamplevmmnetaqqnmenhpvIRTLYDHVDEVTCLSFHPTEQILAS 190
           67889*********************************988************************************************ PP
   S: 70   gseDrtikvwdlstgkcvhtlk..ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvs 154
           gs+D+t+k++d+s+++  +++k  ++ ++++s+sf+psgd+l++G+++ t+r++d++t qc+ +  +l++h++++++v+++p++n +v+
   Q: 191  GSRDYTLKLFDYSKPSAKRAFKhvQEAEMLRSISFHPSGDFLLVGTQHPTLRLYDVNTFQCFVScnPLDQHTDTICGVCYNPSANSYVT 279
           *************999999999888999************************************99*********************** PP
   S: 155  GslDrtvrlWdlktgkllrtltgghtdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs....pnderlv 238
           +s+D+ ++lWd  ++++++t+ ++h+++  + + f++n+k+++s ++d+  klw+++tg+++++++g     ++ + +    +++e +v
   Q: 280  CSKDGSIKLWDGVSNRCVTTFDKAHEGAEVCSAvFSKNSKYILSTGKDSVAKLWEISTGRTLVKYTGAGLSGRQTHRTqgvfNHTEDYV 368
           *********************9999998777766*********************************9977777776666679****** PP
   S: 239  sgssDgsiri..Wdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkk 296
              ++++i++  Wd+r+ +  + l+l +++++ + v+s++++ ++++s+d ++++w  ++
   Q: 369  LLPDERTISLccWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRARFWYRRT 428
           ********9888********************************************9875 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MFRPKPTLKD RQHLYKLIIS QLLYDGYTII ANSLISEVKP QNVVSPSEQL MQLAKIGMEN 60
DDSAVQYAIG RSDTVAPGVG IDLEFDADVQ TMSPEASEYE TCYVTSHKGP CRVATYSRDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGACTTTTA ATTTAACGGG TTTACGTGTA CGTCTTGACG TAAGACGCAC AGAACGTGTG 60
CGCACATCCC TTGAAGTGGT AAGTCGTCGA TTTTGTGCAA CTTTAAATGA ATGATACTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032028--CSTF1_dimer
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16699--CSTF1_dimer
PF00400--WD40

SMART

SM00320--WD40

KEGG

dre:324238

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	90.26	0.00e+00	833.00
IUUC-Atr-002687	Amborella trichopoda	37.91	6.00e-65	241.00
IUUC-Apl-003438	Anas platyrhynchos	90.02	0.00e+00	831.00
IUUC-Aca-005178	Anolis carolinensis	90.72	0.00e+00	835.00
IUUC-Aly-005791	Arabidopsis lyrata	36.56	4.00e-77	281.00
IUUC-Ath-006689	Arabidopsis thaliana	37.26	5.00e-78	285.00
IUUC-Ame-011217	Astyanax mexicanus	95.77	2.00e-168	584.00
IUUC-Bta-012619	Bos taurus	90.49	0.00e+00	834.00
IUUC-Bdi-014515	Brachypodium distachyon	42.51	5.00e-76	278.00
IUUC-Bra-017450	Brassica rapa	36.57	6.00e-73	268.00
IUUC-Cel-018151	Caenorhabditis elegans	52.20	1.00e-131	462.00
IUUC-Cja-019304	Callithrix jacchus	90.02	0.00e+00	830.00
IUUC-Cfa-020208	Canis familiaris	90.26	0.00e+00	833.00
IUUC-Cpo-022245	Cavia porcellus	90.26	0.00e+00	833.00
IUUC-Csa-023066	Chlorocebus sabaeus	90.02	0.00e+00	830.00
IUUC-Cho-024770	Choloepus hoffmanni	93.32	0.00e+00	749.00
IUUC-Cin-025621	Ciona intestinalis	57.04	2.00e-149	521.00
IUUC-Csv-026071	Ciona savignyi	60.37	1.00e-159	556.00
IUUC-Dno-029903	Dasypus novemcinctus	90.26	0.00e+00	833.00
IUUC-Dor-030423	Dipodomys ordii	90.49	0.00e+00	833.00
IUUC-Dme-031993	Drosophila melanogaster	53.16	2.00e-127	449.00
IUUC-Ete-032689	Echinops telfairi	85.23	3.00e-71	262.00
IUUC-Eca-033316	Equus caballus	90.02	0.00e+00	832.00
IUUC-Eeu-035001	Erinaceus europaeus	87.47	0.00e+00	801.00
IUUC-Fca-036447	Felis catus	90.26	0.00e+00	833.00
IUUC-Fal-037601	Ficedula albicollis	90.02	0.00e+00	831.00
IUUC-Gmo-038531	Gadus morhua	93.30	0.00e+00	845.00
IUUC-Gga-040869	Gallus gallus	89.79	0.00e+00	829.00
IUUC-Gac-042380	Gasterosteus aculeatus	94.47	0.00e+00	864.00
IUUC-Gma-043478	Glycine max	37.65	5.00e-80	291.00
IUUC-Ggo-045302	Gorilla gorilla	90.02	0.00e+00	830.00
IUUC-Hsa-045678	Homo sapiens	90.02	0.00e+00	830.00
IUUC-Hvu-047301	Hordeum vulgare	42.14	2.00e-77	282.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	90.26	0.00e+00	833.00
IUUC-Lch-050319	Latimeria chalumnae	90.26	0.00e+00	836.00
IUUC-Lpe-051440	Leersia perrieri	39.81	3.00e-64	239.00
IUUC-Loc-052035	Lepisosteus oculatus	93.74	0.00e+00	860.00
IUUC-Laf-054275	Loxodonta africana	90.26	0.00e+00	833.00
IUUC-Mcc-055857	Macaca mulatta	77.49	0.00e+00	682.00
IUUC-Meu-056194	Macropus eugenii	96.84	1.00e-90	325.00
IUUC-Mtr-058667	Medicago truncatula	36.47	2.00e-74	272.00
IUUC-Mga-059710	Meleagris gallopavo	89.79	0.00e+00	829.00
IUUC-Mmr-060604	Microcebus murinus	90.26	0.00e+00	833.00
IUUC-Mdo-062953	Monodelphis domestica	90.49	0.00e+00	835.00
IUUC-Mmu-064292	Mus musculus	90.02	0.00e+00	832.00
IUUC-Mac-064568	Musa acuminata	43.03	2.00e-75	276.00
IUUC-Mpu-066294	Mustela putorius furo	60.09	5.00e-143	501.00
IUUC-Mlu-067995	Myotis lucifugus	89.33	0.00e+00	823.00
IUUC-Nle-069322	Nomascus leucogenys	90.02	0.00e+00	830.00
IUUC-Opr-070580	Ochotona princeps	90.49	0.00e+00	835.00
IUUC-Ont-072554	Oreochromis niloticus	96.29	0.00e+00	881.00
IUUC-Oan-072856	Ornithorhynchus anatinus	90.02	0.00e+00	832.00
IUUC-Ocu-074150	Oryctolagus cuniculus	78.57	0.00e+00	694.00
IUUC-Oba-075585	Oryza barthii	37.26	2.00e-66	246.00
IUUC-Obr-076069	Oryza brachyantha	40.65	7.00e-74	271.00
IUUC-Ogl-077045	Oryza glaberrima	41.54	4.00e-77	282.00
IUUC-Ogu-078697	Oryza glumaepatula	41.64	1.00e-72	269.00
IUUC-Oin-080119	Oryza indica	41.54	4.00e-77	282.00
IUUC-Olo-081093	Oryza longistaminata	31.25	1.00e-42	169.00
IUUC-Ome-081718	Oryza meridionalis	34.12	1.00e-54	208.00
IUUC-Oni-082072	Oryza nivara	37.26	2.00e-66	246.00
IUUC-Opu-084080	Oryza punctata	35.01	1.00e-55	210.00
IUUC-Oru-085070	Oryza rufipogon	38.66	3.00e-66	247.00
IUUC-Osa-086149	Oryza sativa	41.54	4.00e-77	282.00
IUUC-Ola-086697	Oryzias latipes	95.82	0.00e+00	879.00
IUUC-Oga-088697	Otolemur garnettii	90.26	0.00e+00	833.00
IUUC-Oar-089774	Ovis aries	90.26	0.00e+00	834.00
IUUC-Ptr-090924	Pan troglodytes	90.02	0.00e+00	830.00
IUUC-Pan-092373	Papio anubis	90.02	0.00e+00	830.00
IUUC-Psi-094001	Pelodiscus sinensis	89.79	0.00e+00	828.00
IUUC-Pma-094274	Petromyzon marinus	75.52	0.00e+00	705.00
IUUC-Ppa-095562	Physcomitrella patens	35.94	1.00e-77	283.00
IUUC-Pfo-097235	Poecilia formosa	95.13	0.00e+00	873.00
IUUC-Pab-098608	Pongo abelii	90.02	0.00e+00	830.00
IUUC-Pca-100268	Procavia capensis	90.49	0.00e+00	834.00
IUUC-Ppe-101425	Prunus persica	44.14	8.00e-79	287.00
IUUC-Pva-103183	Pteropus vampyrus	90.26	0.00e+00	833.00
IUUC-Rno-105097	Rattus norvegicus	90.02	0.00e+00	832.00
IUUC-Sha-107642	Sarcophilus harrisii	90.49	0.00e+00	835.00
IUUC-Smo-108680	Selaginella moellendorffii	37.04	6.00e-77	281.00
IUUC-Sit-110471	Setaria italica	41.41	3.00e-80	293.00
IUUC-Sly-111143	Solanum lycopersicum	33.89	5.00e-34	138.00
IUUC-Stu-111926	Solanum tuberosum	43.75	9.00e-32	129.00
IUUC-Sar-112947	Sorex araneus	92.71	6.00e-164	569.00
IUUC-Sbi-113769	Sorghum bicolor	42.43	3.00e-77	282.00
IUUC-Ssc-115736	Sus scrofa	90.26	0.00e+00	833.00
IUUC-Tgu-117457	Taeniopygia guttata	90.02	0.00e+00	831.00
IUUC-Tru-117760	Takifugu rubripes	93.74	0.00e+00	866.00
IUUC-Tsy-118943	Tarsius syrichta	89.33	0.00e+00	818.00
IUUC-Tni-120081	Tetraodon nigroviridis	94.20	0.00e+00	869.00
IUUC-Tca-121190	Theobroma cacao	39.95	4.00e-84	305.00
IUUC-Tae-125535	Triticum aestivum	43.32	2.00e-80	292.00
IUUC-Tur-126329	Triticum urartu	42.90	1.00e-79	290.00
IUUC-Tbe-127878	Tupaia belangeri	89.15	0.00e+00	810.00
IUUC-Ttr-128985	Tursiops truncatus	90.26	0.00e+00	833.00
IUUC-Vpa-130147	Vicugna pacos	90.02	0.00e+00	831.00
IUUC-Vvi-130935	Vitis vinifera	39.30	9.00e-83	300.00
IUUC-Xtr-132482	Xenopus tropicalis	89.79	0.00e+00	832.00
IUUC-Xma-133929	Xiphophorus maculatus	95.13	0.00e+00	873.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence