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Tag Content
iUUCD ID IUUC-Lch-050319
Ensembl Protein ID ENSLACP00000018487.2
UniProt Accession H3B9B6; H3B9B6_LATCH
Genbank Protein ID ENSLACP00000018487
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01027209
Gene Name CSTF1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000016278.2 ENSLACT00000018620.2 ENSLACP00000018487.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.00e-27 92.2 172 202
UBD/Beta-Prp 4.10e-72 243.1 102 429
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
    H d+vtclaf ++ +l+sGs D t+k++D+
   Q: 172 HVDEVTCLAFhPTeQILASGSKDYTLKLFDY 202
    9**********77799**************7 PP
   


   UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.......................lrslsgheaevtavkfspdgkilvt 69
    ++ ++hk+++++ ++s+d++l+atgs+d++ik+ d++++ + +r+l++h +evt++ f+p+++il++
   Q: 102 CYVTSHKGQCRVATYSRDGQLIATGSADASIKILDTERMLAksampievmmnetaqqnmenhpvIRTLYDHVDEVTCLAFHPTEQILAS 190
    67789*********************************988************************************************ PP
   S: 70 gseDrtikvwdlstgkcvhtlk..ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvs 154
    gs+D+t+k++d+s+++ +++k ++ ++++s+s++psgd++++G+++ t+r++d++t qc+ + ++++h+++++ v+++p++n++v+
   Q: 191 GSKDYTLKLFDYSKPSAKRAFKyiQEAEMLRSISIHPSGDFILVGTQHPTLRLYDINTFQCFVScnPQDQHTDAICAVNYNPSANMYVT 279
    *****************99999999***************************************99*********************** PP
   S: 155 GslDrtvrlWdlktgkllrtltgghtdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs....pnderlv 238
    +s+D+ ++lWd ++++++t++++h+++ + + f++n+k+++s ++d+ klw+++tg+++++++g ++++ + +++e +v
   Q: 280 CSKDGSIKLWDGVSNRCITTFEKAHDGAEVCSAiFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQMHRTqavfNHTEDYV 368
    *********************9999998777666***********************************88888887777789****** PP
   S: 239 sgssDgsiri..Wdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkkn 297
    ++++i++ Wd+rs + + l+l +++++ + v+s++++ ++++s+d ++++w +++
   Q: 369 LLPDERTISLccWDSRSAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDYRARFWYRRST 429
    ********9888********************************************98765 PP
   

Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MYRSKVTLKD RQHLYKLIIS QLLYDGFTNL ANGLINEVKP QSLCSPSEQL LHLTKLGMEN 60
DDSTVQYAIG RSDTVAPGTG IDLEFDADVQ TMSPEASEYE TCYVTSHKGQ CRVATYSRDG 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Lch-050319|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGCTGGCTCT GGAAGTCTGT GTCTTGTTTT AACTGTCTCC GCAAAGCTTT GCTGCGCGGG 60
TAACGTGAGT AAAATAACAT ATAAATTAAA GCCACTGGCG AGTTTTCTAC AGATATTATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Lch-050319|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032028--CSTF1_dimer
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16699--CSTF1_dimer
PF00400--WD40

SMART

SM00320--WD40

KEGG lcm:102364688
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002163 Ailuropoda melanoleuca 94.66 0.00e+00 868.00
IUUC-Atr-002687 Amborella trichopoda 37.91 3.00e-66 246.00
IUUC-Apl-003438 Anas platyrhynchos 95.13 0.00e+00 870.00
IUUC-Aca-005178 Anolis carolinensis 94.90 0.00e+00 868.00
IUUC-Aly-005791 Arabidopsis lyrata 36.79 3.00e-78 285.00
IUUC-Ath-006689 Arabidopsis thaliana 37.74 7.00e-79 287.00
IUUC-Ame-011217 Astyanax mexicanus 91.55 1.00e-163 568.00
IUUC-Bta-012619 Bos taurus 94.90 0.00e+00 869.00
IUUC-Bdi-014515 Brachypodium distachyon 43.43 4.00e-79 288.00
IUUC-Bra-017450 Brassica rapa 39.19 2.00e-74 272.00
IUUC-Cel-018151 Caenorhabditis elegans 51.72 8.00e-133 466.00
IUUC-Cja-019304 Callithrix jacchus 94.43 0.00e+00 865.00
IUUC-Cfa-020208 Canis familiaris 94.66 0.00e+00 868.00
IUUC-Cpo-022245 Cavia porcellus 94.66 0.00e+00 868.00
IUUC-Csa-023066 Chlorocebus sabaeus 94.43 0.00e+00 865.00
IUUC-Cho-024770 Choloepus hoffmanni 96.79 0.00e+00 768.00
IUUC-Cin-025621 Ciona intestinalis 56.34 2.00e-148 518.00
IUUC-Csv-026071 Ciona savignyi 58.97 3.00e-159 554.00
IUUC-Dre-028254 Danio rerio 90.26 0.00e+00 836.00
IUUC-Dno-029903 Dasypus novemcinctus 94.66 0.00e+00 868.00
IUUC-Dor-030423 Dipodomys ordii 94.90 0.00e+00 868.00
IUUC-Dme-031993 Drosophila melanogaster 54.01 7.00e-132 463.00
IUUC-Ete-032689 Echinops telfairi 89.26 1.00e-75 276.00
IUUC-Eca-033316 Equus caballus 94.43 0.00e+00 867.00
IUUC-Eeu-035001 Erinaceus europaeus 90.49 0.00e+00 833.00
IUUC-Fca-036447 Felis catus 94.66 0.00e+00 868.00
IUUC-Fal-037601 Ficedula albicollis 95.13 0.00e+00 870.00
IUUC-Gmo-038531 Gadus morhua 88.91 0.00e+00 810.00
IUUC-Gga-040869 Gallus gallus 94.90 0.00e+00 867.00
IUUC-Gac-042380 Gasterosteus aculeatus 90.09 0.00e+00 830.00
IUUC-Gma-043478 Glycine max 38.57 9.00e-83 300.00
IUUC-Ggo-045302 Gorilla gorilla 94.43 0.00e+00 865.00
IUUC-Hsa-045678 Homo sapiens 94.43 0.00e+00 865.00
IUUC-Hvu-047301 Hordeum vulgare 43.62 2.00e-81 295.00
IUUC-Itr-048259 Ictidomys tridecemlineatus 94.66 0.00e+00 868.00
IUUC-Lpe-051440 Leersia perrieri 40.13 3.00e-66 245.00
IUUC-Loc-052035 Lepisosteus oculatus 92.81 0.00e+00 853.00
IUUC-Laf-054275 Loxodonta africana 94.66 0.00e+00 868.00
IUUC-Mcc-055857 Macaca mulatta 81.44 0.00e+00 714.00
IUUC-Meu-056194 Macropus eugenii 98.10 1.00e-90 325.00
IUUC-Mtr-058667 Medicago truncatula 38.18 2.00e-76 279.00
IUUC-Mga-059710 Meleagris gallopavo 94.90 0.00e+00 867.00
IUUC-Mmr-060604 Microcebus murinus 94.66 0.00e+00 868.00
IUUC-Mdo-062953 Monodelphis domestica 95.13 0.00e+00 873.00
IUUC-Mmu-064292 Mus musculus 94.43 0.00e+00 867.00
IUUC-Mac-064568 Musa acuminata 43.64 6.00e-78 283.00
IUUC-Mpu-066294 Mustela putorius furo 63.29 7.00e-153 533.00
IUUC-Mlu-067995 Myotis lucifugus 94.20 0.00e+00 862.00
IUUC-Nle-069322 Nomascus leucogenys 94.43 0.00e+00 865.00
IUUC-Opr-070580 Ochotona princeps 94.66 0.00e+00 867.00
IUUC-Ont-072554 Oreochromis niloticus 92.11 0.00e+00 850.00
IUUC-Oan-072856 Ornithorhynchus anatinus 94.66 0.00e+00 869.00
IUUC-Ocu-074150 Oryctolagus cuniculus 82.72 0.00e+00 729.00
IUUC-Oba-075585 Oryza barthii 39.01 2.00e-70 259.00
IUUC-Obr-076069 Oryza brachyantha 40.95 5.00e-75 274.00
IUUC-Ogl-077045 Oryza glaberrima 42.73 2.00e-79 289.00
IUUC-Ogu-078697 Oryza glumaepatula 42.86 8.00e-75 275.00
IUUC-Oin-080119 Oryza indica 42.73 2.00e-79 289.00
IUUC-Olo-081093 Oryza longistaminata 32.44 5.00e-45 176.00
IUUC-Ome-081718 Oryza meridionalis 35.31 6.00e-57 215.00
IUUC-Oni-082072 Oryza nivara 39.01 2.00e-70 259.00
IUUC-Opu-084080 Oryza punctata 35.61 7.00e-58 217.00
IUUC-Oru-085070 Oryza rufipogon 39.94 1.00e-69 258.00
IUUC-Osa-086149 Oryza sativa 42.73 2.00e-79 289.00
IUUC-Ola-086697 Oryzias latipes 91.18 0.00e+00 844.00
IUUC-Oga-088697 Otolemur garnettii 94.66 0.00e+00 868.00
IUUC-Oar-089774 Ovis aries 94.66 0.00e+00 870.00
IUUC-Ptr-090924 Pan troglodytes 94.43 0.00e+00 865.00
IUUC-Pan-092373 Papio anubis 94.43 0.00e+00 865.00
IUUC-Psi-094001 Pelodiscus sinensis 94.90 0.00e+00 869.00
IUUC-Pma-094274 Petromyzon marinus 73.66 0.00e+00 694.00
IUUC-Ppa-095562 Physcomitrella patens 36.83 2.00e-81 296.00
IUUC-Pfo-097235 Poecilia formosa 92.11 0.00e+00 850.00
IUUC-Pab-098608 Pongo abelii 94.43 0.00e+00 865.00
IUUC-Pca-100268 Procavia capensis 94.90 0.00e+00 869.00
IUUC-Ppe-101425 Prunus persica 41.31 1.00e-81 296.00
IUUC-Pva-103183 Pteropus vampyrus 94.66 0.00e+00 868.00
IUUC-Rno-105097 Rattus norvegicus 94.43 0.00e+00 867.00
IUUC-Sha-107642 Sarcophilus harrisii 95.13 0.00e+00 873.00
IUUC-Smo-108680 Selaginella moellendorffii 35.83 1.00e-77 283.00
IUUC-Sit-110471 Setaria italica 40.89 4.00e-82 298.00
IUUC-Sly-111143 Solanum lycopersicum 33.19 7.00e-33 134.00
IUUC-Stu-111926 Solanum tuberosum 44.10 3.00e-33 134.00
IUUC-Sar-112947 Sorex araneus 96.88 3.00e-169 587.00
IUUC-Sbi-113769 Sorghum bicolor 43.03 1.00e-79 289.00
IUUC-Ssc-115736 Sus scrofa 94.66 0.00e+00 868.00
IUUC-Tgu-117457 Taeniopygia guttata 95.13 0.00e+00 870.00
IUUC-Tru-117760 Takifugu rubripes 90.72 0.00e+00 842.00
IUUC-Tsy-118943 Tarsius syrichta 93.74 0.00e+00 853.00
IUUC-Tni-120081 Tetraodon nigroviridis 91.42 0.00e+00 845.00
IUUC-Tca-121190 Theobroma cacao 39.95 2.00e-85 308.00
IUUC-Tae-125535 Triticum aestivum 44.81 3.00e-84 305.00
IUUC-Tur-126329 Triticum urartu 44.81 1.00e-83 303.00
IUUC-Tbe-127878 Tupaia belangeri 93.16 0.00e+00 842.00
IUUC-Ttr-128985 Tursiops truncatus 94.66 0.00e+00 868.00
IUUC-Vpa-130147 Vicugna pacos 94.43 0.00e+00 866.00
IUUC-Vvi-130935 Vitis vinifera 39.30 1.00e-84 306.00
IUUC-Xtr-132482 Xenopus tropicalis 93.74 0.00e+00 862.00
IUUC-Xma-133929 Xiphophorus maculatus 92.11 0.00e+00 850.00
Created Date 25-Jun-2017

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