iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036731

Ensembl Protein ID

ENSFALP00000003853.1

UniProt Accession

U3JM49; U3JM49_FICAL

Genbank Protein ID

ENSFALP00000003853

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000899

Gene Name

LONRF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000003699.1	ENSFALT00000003868.1	ENSFALP00000003853.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-08	33.6	226	274
E3 activity/RING/RING	3.60e-07	30.3	230	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpltee 53
           ++f C++ + l+ +Pv++p+G+t+ + ++e++l++  + cP+++++l+e 
   Q: 226  SDFECSLCMRLFFEPVTTPCGHTFCKGCLERCLDHAPQ-CPLCKESLKEY 274
           68***********************************9.********875 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f++ p+++pCgH+f++ Cl++          + +CPlC+
   Q: 230  CSLCMRLFFE-PVTTPCGHTFCKGCLERC------LDHAPQCPLCK 268
           **********.9**************999......9*********7 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MLRIYRAESY VGLREYKTAI EDLNFVISKM PNWPEVYFQK GKVLQDSGFV GDALQLFLQC 60
LALDEDFLPA KLEVEKILCD VLSPEKLGES LKESAWNSPH IRNKPFILGS EVTASYSNLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC CCCCCCCCCC 60
CCCCCCCCCC CGGCACCAGC ACGGCCGCGG CCCCGCTGCG CACCAGCGTT GTCCTCAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

fab:101813545

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001989	Ailuropoda melanoleuca	75.71	0.00e+00	811.00
IUUC-Apl-003309	Anas platyrhynchos	94.67	0.00e+00	781.00
IUUC-Aca-004288	Anolis carolinensis	74.43	0.00e+00	805.00
IUUC-Aly-005476	Arabidopsis lyrata	33.20	2.00e-39	156.00
IUUC-Ath-006654	Arabidopsis thaliana	33.59	6.00e-40	158.00
IUUC-Afu-008802	Aspergillus fumigatus	29.32	1.00e-39	157.00
IUUC-Ame-010716	Astyanax mexicanus	60.67	2.00e-180	625.00
IUUC-Bta-012903	Bos taurus	75.52	0.00e+00	826.00
IUUC-Bdi-014333	Brachypodium distachyon	41.74	1.00e-44	173.00
IUUC-Bol-016150	Brassica oleracea	36.68	2.00e-40	160.00
IUUC-Bra-016716	Brassica rapa	34.98	1.00e-37	150.00
IUUC-Cel-018356	Caenorhabditis elegans	34.15	1.00e-09	55.50
IUUC-Cja-019312	Callithrix jacchus	76.14	0.00e+00	827.00
IUUC-Cfa-020159	Canis familiaris	76.85	0.00e+00	831.00
IUUC-Cpo-022528	Cavia porcellus	75.86	0.00e+00	793.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	33.78	7.00e-13	67.40
IUUC-Csa-023361	Chlorocebus sabaeus	76.14	0.00e+00	798.00
IUUC-Cho-024549	Choloepus hoffmanni	68.25	0.00e+00	672.00
IUUC-Cgl-026514	Colletotrichum gloeosporioides	32.19	2.00e-45	176.00
IUUC-Cme-027153	Cyanidioschyzon merolae	30.60	2.00e-27	117.00
IUUC-Dre-028195	Danio rerio	58.50	3.00e-175	608.00
IUUC-Dno-029284	Dasypus novemcinctus	75.71	0.00e+00	825.00
IUUC-Dor-031123	Dipodomys ordii	67.41	2.00e-174	605.00
IUUC-Ete-032455	Echinops telfairi	78.41	0.00e+00	662.00
IUUC-Eca-033248	Equus caballus	79.39	0.00e+00	641.00
IUUC-Eeu-034441	Erinaceus europaeus	79.13	0.00e+00	665.00
IUUC-Fca-035551	Felis catus	76.09	0.00e+00	827.00
IUUC-Gmo-039315	Gadus morhua	54.21	2.00e-157	548.00
IUUC-Gga-040888	Gallus gallus	94.92	0.00e+00	825.00
IUUC-Gac-042121	Gasterosteus aculeatus	59.73	5.00e-172	597.00
IUUC-Ggo-044985	Gorilla gorilla	75.95	0.00e+00	825.00
IUUC-Hsa-046592	Homo sapiens	75.95	0.00e+00	824.00
IUUC-Hvu-047145	Hordeum vulgare	43.20	7.00e-27	114.00
IUUC-Itr-048573	Ictidomys tridecemlineatus	77.08	0.00e+00	832.00
IUUC-Lch-050404	Latimeria chalumnae	65.97	0.00e+00	683.00
IUUC-Laf-053431	Loxodonta africana	76.66	0.00e+00	833.00
IUUC-Mcc-055751	Macaca mulatta	74.14	0.00e+00	771.00
IUUC-Mtr-058075	Medicago truncatula	35.09	2.00e-44	173.00
IUUC-Mla-058946	Melampsora laricipopulina	36.30	4.00e-49	188.00
IUUC-Mga-059472	Meleagris gallopavo	95.11	2.00e-155	541.00
IUUC-Mvi-060228	Microbotryum violaceum	33.62	4.00e-51	196.00
IUUC-Mmr-061283	Microcebus murinus	76.70	0.00e+00	833.00
IUUC-Mmu-063169	Mus musculus	74.67	0.00e+00	806.00
IUUC-Mac-065566	Musa acuminata	38.03	2.00e-43	170.00
IUUC-Mpu-066537	Mustela putorius furo	76.66	0.00e+00	806.00
IUUC-Mlu-067497	Myotis lucifugus	75.90	0.00e+00	820.00
IUUC-Nle-068971	Nomascus leucogenys	75.95	0.00e+00	814.00
IUUC-Opr-070791	Ochotona princeps	76.10	0.00e+00	738.00
IUUC-Ont-071548	Oreochromis niloticus	61.27	0.00e+00	632.00
IUUC-Oan-072747	Ornithorhynchus anatinus	82.44	0.00e+00	683.00
IUUC-Ocu-074928	Oryctolagus cuniculus	80.15	0.00e+00	662.00
IUUC-Oba-075239	Oryza barthii	43.40	9.00e-45	174.00
IUUC-Obr-076158	Oryza brachyantha	40.69	1.00e-45	177.00
IUUC-Ogu-078154	Oryza glumaepatula	41.74	5.00e-45	175.00
IUUC-Oin-079067	Oryza indica	36.71	1.00e-45	177.00
IUUC-Olo-080663	Oryza longistaminata	43.40	2.00e-44	173.00
IUUC-Oni-082119	Oryza nivara	36.71	1.00e-45	177.00
IUUC-Oru-085190	Oryza rufipogon	41.30	1.00e-44	173.00
IUUC-Ola-086977	Oryzias latipes	60.31	0.00e+00	626.00
IUUC-Olu-087810	Ostreococcus lucimarinus	24.53	1.00e-05	45.10
IUUC-Oga-088719	Otolemur garnettii	76.52	0.00e+00	825.00
IUUC-Oar-089577	Ovis aries	75.52	0.00e+00	827.00
IUUC-Ptr-090711	Pan troglodytes	75.95	0.00e+00	823.00
IUUC-Pan-092587	Papio anubis	75.76	0.00e+00	806.00
IUUC-Psi-093128	Pelodiscus sinensis	82.92	0.00e+00	900.00
IUUC-Pfo-096474	Poecilia formosa	59.85	0.00e+00	628.00
IUUC-Pab-097800	Pongo abelii	75.67	0.00e+00	815.00
IUUC-Pop-100044	Populus trichocarpa	31.47	3.00e-46	179.00
IUUC-Pgr-103289	Puccinia graminis	26.95	6.00e-30	125.00
IUUC-Ptt-103898	Puccinia triticina	29.25	9.00e-30	124.00
IUUC-Rno-105718	Rattus norvegicus	74.76	0.00e+00	806.00
IUUC-Sit-110495	Setaria italica	40.00	5.00e-45	175.00
IUUC-Sar-113220	Sorex araneus	78.46	0.00e+00	634.00
IUUC-Sbi-114779	Sorghum bicolor	31.03	1.00e-30	127.00
IUUC-Sre-114977	Sporisorium reilianum	31.50	6.00e-35	143.00
IUUC-Ssc-115733	Sus scrofa	75.52	0.00e+00	827.00
IUUC-Tgu-117431	Taeniopygia guttata	90.46	0.00e+00	959.00
IUUC-Tru-118274	Takifugu rubripes	59.89	2.00e-177	615.00
IUUC-Tsy-119043	Tarsius syrichta	75.38	0.00e+00	805.00
IUUC-Tni-120766	Tetraodon nigroviridis	54.46	2.00e-159	555.00
IUUC-Tae-125900	Triticum aestivum	36.43	1.00e-47	183.00
IUUC-Tur-126297	Triticum urartu	41.30	9.00e-35	141.00
IUUC-Tme-127112	Tuber melanosporum	36.27	2.00e-48	186.00
IUUC-Tbe-127284	Tupaia belangeri	75.30	0.00e+00	638.00
IUUC-Uma-129541	Ustilago maydis	31.02	5.00e-35	143.00
IUUC-Vda-129721	Verticillium dahliae	28.85	7.00e-36	144.00
IUUC-Vpa-130408	Vicugna pacos	69.26	0.00e+00	710.00
IUUC-Xtr-132417	Xenopus tropicalis	65.09	0.00e+00	691.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence