iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075256

Ensembl Protein ID

OBART01G11080.1

UniProt Accession

A0A0D3EMB9; A0A0D3EMB9_9ORYZ

Protein Name

Presenilin

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART01G11080	OBART01G11080.1	OBART01G11080.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	56.52	5.00e-23	105.00	IUUC-Cel-018553
UBD/Alpha-Helix/CUE	31.82	7.00e-25	112.00	IUUC-Dre-028689

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza barthii

Functional Description
(View)

Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.

Protein Sequence
(Fasta)

MDPAAGSPDP APAPGATTST AATVLDGLGA EVLAVMSPNY MRFSAFFVLF SMGGAIAAAV 60
LRRLGAPLDA ATALVLLFNA SAVGVLSVFA SAVPIVVRQG YMVALAVIVA AWLSRLPEWT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCCCG CCGCCGGCTC GCCGGATCCG GCGCCGGCGC CGGGGGCGAC CACCTCCACG 60
GCGGCGACCG TCCTCGACGG CCTCGGCGCG GAGGTGCTCG CGGTGATGTC GCCGGTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN

SMART

SM00730--PSN

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0000139--C:Golgi membrane
GO:0005798--C:Golgi-associated vesicle
GO:0016021--C:integral component of membrane
GO:0004190--F:aspartic-type endopeptidase activity
GO:0007219--P:Notch signaling pathway
GO:0016485--P:protein processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000686	Aegilops tauschii	76.88	8.00e-110	390.00
IUUC-Aml-002356	Ailuropoda melanoleuca	40.19	8.00e-19	87.80
IUUC-Atr-003039	Amborella trichopoda	52.14	9.00e-86	310.00
IUUC-Apl-003727	Anas platyrhynchos	33.13	1.00e-30	127.00
IUUC-Aca-004582	Anolis carolinensis	33.64	2.00e-30	125.00
IUUC-Aly-005455	Arabidopsis lyrata	51.50	5.00e-83	300.00
IUUC-Ath-006730	Arabidopsis thaliana	51.63	1.00e-82	299.00
IUUC-Ame-010686	Astyanax mexicanus	33.86	3.00e-19	88.60
IUUC-Bta-013026	Bos taurus	33.23	9.00e-30	124.00
IUUC-Bdi-014196	Brachypodium distachyon	79.21	5.00e-139	487.00
IUUC-Bol-015841	Brassica oleracea	53.30	9.00e-83	300.00
IUUC-Bra-017580	Brassica rapa	51.23	2.00e-79	288.00
IUUC-Cel-018553	Caenorhabditis elegans	33.85	2.00e-40	159.00
IUUC-Cja-018824	Callithrix jacchus	41.12	2.00e-19	89.40
IUUC-Cfa-020074	Canis familiaris	34.25	7.00e-32	130.00
IUUC-Cpo-022237	Cavia porcellus	35.17	1.00e-30	127.00
IUUC-Cre-022747	Chlamydomonas reinhardtii	43.85	1.00e-26	114.00
IUUC-Csa-023537	Chlorocebus sabaeus	36.09	8.00e-32	130.00
IUUC-Cho-024735	Choloepus hoffmanni	34.56	4.00e-29	122.00
IUUC-Cin-025780	Ciona intestinalis	34.56	1.00e-34	140.00
IUUC-Csv-025967	Ciona savignyi	41.12	6.00e-20	91.30
IUUC-Dre-028689	Danio rerio	33.64	4.00e-27	115.00
IUUC-Dno-029758	Dasypus novemcinctus	35.78	2.00e-32	132.00
IUUC-Dor-030609	Dipodomys ordii	55.56	7.00e-19	87.80
IUUC-Dme-031929	Drosophila melanogaster	42.99	3.00e-21	95.90
IUUC-Ete-032487	Echinops telfairi	35.97	1.00e-13	70.90
IUUC-Eca-034387	Equus caballus	39.25	1.00e-18	87.40
IUUC-Eeu-035134	Erinaceus europaeus	34.56	2.00e-31	129.00
IUUC-Fca-036243	Felis catus	34.25	4.00e-31	128.00
IUUC-Fal-036600	Ficedula albicollis	33.03	8.00e-30	124.00
IUUC-Gmo-039665	Gadus morhua	38.32	3.00e-17	82.40
IUUC-Gga-040993	Gallus gallus	33.33	4.00e-31	128.00
IUUC-Gac-042511	Gasterosteus aculeatus	34.97	1.00e-28	120.00
IUUC-Gma-043822	Glycine max	85.88	6.00e-40	157.00
IUUC-Ggo-045338	Gorilla gorilla	41.12	2.00e-19	89.70
IUUC-Hsa-046822	Homo sapiens	36.09	7.00e-32	130.00
IUUC-Hvu-047141	Hordeum vulgare	78.37	4.00e-117	414.00
IUUC-Itr-048420	Ictidomys tridecemlineatus	33.94	1.00e-30	126.00
IUUC-Lch-049638	Latimeria chalumnae	37.38	2.00e-18	86.30
IUUC-Lpe-051132	Leersia perrieri	87.91	3.00e-154	537.00
IUUC-Loc-052427	Lepisosteus oculatus	32.11	1.00e-28	120.00
IUUC-Laf-053979	Loxodonta africana	34.56	3.00e-29	122.00
IUUC-Mcc-055682	Macaca mulatta	36.09	7.00e-32	130.00
IUUC-Meu-056004	Macropus eugenii	31.25	5.00e-19	88.20
IUUC-Mtr-058392	Medicago truncatula	52.34	2.00e-79	289.00
IUUC-Mga-059466	Meleagris gallopavo	33.54	5.00e-31	128.00
IUUC-Mmr-060890	Microcebus murinus	40.19	4.00e-19	88.60
IUUC-Mdo-062122	Monodelphis domestica	34.65	2.00e-30	125.00
IUUC-Mmu-063823	Mus musculus	40.19	5.00e-19	88.20
IUUC-Mac-064858	Musa acuminata	67.65	1.00e-45	176.00
IUUC-Mpu-065927	Mustela putorius furo	34.56	2.00e-32	132.00
IUUC-Mlu-067079	Myotis lucifugus	34.25	2.00e-31	129.00
IUUC-Nle-070180	Nomascus leucogenys	36.09	7.00e-32	130.00
IUUC-Opr-070344	Ochotona princeps	37.38	3.00e-16	79.30
IUUC-Ont-071846	Oreochromis niloticus	32.93	5.00e-27	115.00
IUUC-Oan-072783	Ornithorhynchus anatinus	33.33	3.00e-28	118.00
IUUC-Ocu-074527	Oryctolagus cuniculus	34.25	3.00e-31	129.00
IUUC-Obr-076302	Oryza brachyantha	87.53	2.00e-155	541.00
IUUC-Ogl-077097	Oryza glaberrima	100.00	5.00e-168	583.00
IUUC-Ogu-078570	Oryza glumaepatula	99.72	1.00e-167	582.00
IUUC-Oin-079244	Oryza indica	99.43	3.00e-167	580.00
IUUC-Olo-080484	Oryza longistaminata	97.93	4.00e-130	456.00
IUUC-Ome-081814	Oryza meridionalis	97.17	2.00e-165	574.00
IUUC-Oni-082057	Oryza nivara	99.43	2.00e-167	581.00
IUUC-Opu-084176	Oryza punctata	96.03	1.00e-166	578.00
IUUC-Oru-084618	Oryza rufipogon	99.72	9.00e-168	582.00
IUUC-Osa-085602	Oryza sativa	99.43	1.00e-167	581.00
IUUC-Ola-086707	Oryzias latipes	34.40	3.00e-18	85.10
IUUC-Olu-087811	Ostreococcus lucimarinus	50.00	3.00e-32	132.00
IUUC-Oga-088560	Otolemur garnettii	39.25	1.00e-18	87.00
IUUC-Oar-090348	Ovis aries	34.25	8.00e-32	130.00
IUUC-Ptr-091060	Pan troglodytes	36.09	7.00e-32	130.00
IUUC-Pan-091742	Papio anubis	41.12	2.00e-19	89.70
IUUC-Psi-093505	Pelodiscus sinensis	34.25	4.00e-31	128.00
IUUC-Pma-094612	Petromyzon marinus	36.45	9.00e-19	87.40
IUUC-Ppa-095431	Physcomitrella patens	44.59	6.00e-76	277.00
IUUC-Pfo-097396	Poecilia formosa	32.33	6.00e-33	134.00
IUUC-Pab-098591	Pongo abelii	36.09	7.00e-32	130.00
IUUC-Pop-099661	Populus trichocarpa	46.88	3.00e-65	241.00
IUUC-Pca-101029	Procavia capensis	34.25	5.00e-29	121.00
IUUC-Ppe-101495	Prunus persica	51.05	1.00e-84	306.00
IUUC-Pva-102934	Pteropus vampyrus	39.25	1.00e-18	87.00
IUUC-Rno-105861	Rattus norvegicus	39.25	1.00e-18	87.00
IUUC-Sha-107045	Sarcophilus harrisii	33.43	6.00e-31	127.00
IUUC-Smo-109325	Selaginella moellendorffii	41.93	3.00e-51	194.00
IUUC-Sit-110624	Setaria italica	81.59	4.00e-130	457.00
IUUC-Sly-110865	Solanum lycopersicum	85.92	1.00e-32	130.00
IUUC-Stu-112433	Solanum tuberosum	51.39	3.00e-80	291.00
IUUC-Sar-113169	Sorex araneus	40.19	3.00e-19	89.00
IUUC-Sbi-114305	Sorghum bicolor	81.44	1.00e-133	469.00
IUUC-Ssc-115766	Sus scrofa	33.94	6.00e-30	124.00
IUUC-Tgu-116469	Taeniopygia guttata	32.93	1.00e-28	119.00
IUUC-Tru-117732	Takifugu rubripes	32.42	8.00e-29	120.00
IUUC-Tsy-119624	Tarsius syrichta	40.19	4.00e-19	88.60
IUUC-Tni-119852	Tetraodon nigroviridis	35.51	3.00e-17	82.40
IUUC-Tca-121865	Theobroma cacao	53.13	1.00e-85	309.00
IUUC-Tae-125925	Triticum aestivum	77.75	3.00e-121	427.00
IUUC-Tur-126237	Triticum urartu	77.18	2.00e-115	408.00
IUUC-Tbe-127632	Tupaia belangeri	41.12	3.00e-19	89.00
IUUC-Ttr-128793	Tursiops truncatus	34.25	2.00e-30	126.00
IUUC-Vpa-130625	Vicugna pacos	39.05	2.00e-18	85.90
IUUC-Vvi-131312	Vitis vinifera	51.12	3.00e-82	298.00
IUUC-Xtr-132756	Xenopus tropicalis	31.72	2.00e-27	116.00
IUUC-Xma-133377	Xiphophorus maculatus	32.11	1.00e-31	130.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence