iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023476

Ensembl Protein ID

ENSCSAP00000013849.1

UniProt Accession

A0A0D9RZ10; A0A0D9RZ10_CHLSB

Genbank Protein ID

ENSCSAP00000013849

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01149795

Gene Name

TRIM4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000017827.1	ENSCSAT00000015923.1	ENSCSAP00000013849.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-09	37.6	12	53
E3 activity/RING/U-box	2.50e-08	33.8	7	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle f+d p++  CgH f++ Cl   w        ++f CP Cr
   Q: 12   CPICLEYFQD-PVSIECGHNFCRGCLhRSW----APGGGQFPCPECR 53
           **********.***************9999....77**********8 PP

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIek.wlasggk.tcPvtrqplteedlvPnltlrrliqawc 69
            ee+ CpI le ++dPv +++G+ + r ++++ w   gg+  cP +r+p ++  l Pn +l rl ++ +
   Q: 7    QEELTCPICLEYFQDPVSIECGHNFCRGCLHRsWAPGGGQfPCPECRHPSAPAALRPNWALARLTEKTR 75
           6899**************************983655555599*******************99988765 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MEAEDLQEEL TCPICLEYFQ DPVSIECGHN FCRGCLHRSW APGGGQFPCP ECRHPSAPAA 60
LRPNWALARL TEKTRRRRLG PVPPGLCSRH WEPLRLFCED DQRPVCLVCR ESQEHQTHAM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATCAGTCT AACCAGCAGA CAAACACAGA CCTGAACGCT CAAACTTGGA AAGAAAGGCC 60
AAGATTAGAG GCACCTCCCC GGTTGGCTCC ACCAGGGGTC ACAACGTCCA GCCCTAATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR006574--PRY
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13765--PRY
PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0005886--C:plasma membrane
GO:0008270--F:zinc ion binding
GO:0070206--P:protein trimerization

KEGG

csab:103246763

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002308	Ailuropoda melanoleuca	66.24	3.00e-163	567.00
IUUC-Cel-018621	Caenorhabditis elegans	34.07	2.00e-09	57.00
IUUC-Cja-019204	Callithrix jacchus	82.40	0.00e+00	806.00
IUUC-Cfa-021283	Canis familiaris	77.68	0.00e+00	735.00
IUUC-Cho-024657	Choloepus hoffmanni	65.40	2.00e-163	568.00
IUUC-Cne-027043	Cryptococcus neoformans	44.74	3.00e-06	46.60
IUUC-Eca-033740	Equus caballus	77.03	3.00e-151	527.00
IUUC-Hsa-046707	Homo sapiens	91.40	0.00e+00	900.00
IUUC-Mcc-055643	Macaca mulatta	95.93	0.00e+00	917.00
IUUC-Mmr-061318	Microcebus murinus	78.74	0.00e+00	767.00
IUUC-Mpu-066377	Mustela putorius furo	74.95	0.00e+00	691.00
IUUC-Mlu-067319	Myotis lucifugus	74.20	3.00e-143	501.00
IUUC-Nle-069382	Nomascus leucogenys	95.06	0.00e+00	627.00
IUUC-Opr-070278	Ochotona princeps	63.93	3.00e-174	604.00
IUUC-Oga-088830	Otolemur garnettii	69.26	4.00e-162	564.00
IUUC-Oar-089188	Ovis aries	74.32	0.00e+00	700.00
IUUC-Pan-092332	Papio anubis	95.36	0.00e+00	917.00
IUUC-Pab-097648	Pongo abelii	95.99	0.00e+00	907.00
IUUC-Pva-102131	Pteropus vampyrus	71.49	0.00e+00	695.00
IUUC-Ssc-116309	Sus scrofa	66.27	2.00e-172	598.00
IUUC-Tsy-119365	Tarsius syrichta	73.26	5.00e-132	464.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence