iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Laf-054035

UUCD1 version

UUC-LoA-00280

Ensembl Protein ID

ENSLAFP00000006843.2

UniProt Accession

G3T1B1; G3T1B1_LOXAF

Protein Name

Uncharacterized protein

Gene Name

WDR55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000008159.2	ENSLAFT00000008159.2	ENSLAFP00000006843.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-24	83.0	125	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H +++++l + ++++l++G d g +++WD r+
   Q: 125  HGAPINSLLLvDENILATGDDTGGVRLWDQRK 156
           999*****77555****************765 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MEGTCEKSEE HGSDGEDPDS AEAPVRIRNT PEDIVLEAPA SGLAFHPARD LLAAGDVDGD 60
VFVFSYSCQE GETKELWSSG HHLKSCRAVA FSEDGQKLVT VSKDKAIHIL DVEQGQLERR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGGCA CGTGTGAGAA GTCTGAAGAA CATGGGAGTG ACGGGGAGGA TCCTGACTCC 60
GCGGAGGCCC CGGTGCGAAT CCGGAACACC CCAGAAGACA TCGTGCTAGA AGCCCCGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

lav:100655026

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	37.40	3.00e-49	189.00
IUUC-Aml-001768	Ailuropoda melanoleuca	91.13	0.00e+00	699.00
IUUC-Atr-002764	Amborella trichopoda	34.87	2.00e-22	98.20
IUUC-Apl-003880	Anas platyrhynchos	65.35	4.00e-117	415.00
IUUC-Aca-005060	Anolis carolinensis	69.19	1.00e-150	526.00
IUUC-Aly-006484	Arabidopsis lyrata	37.50	2.00e-51	195.00
IUUC-Ath-006652	Arabidopsis thaliana	39.66	9.00e-60	223.00
IUUC-Bta-013497	Bos taurus	89.76	0.00e+00	680.00
IUUC-Bdi-014378	Brachypodium distachyon	38.18	5.00e-57	214.00
IUUC-Bol-016352	Brassica oleracea	40.00	1.00e-61	229.00
IUUC-Bra-017103	Brassica rapa	40.00	4.00e-62	231.00
IUUC-Cel-018192	Caenorhabditis elegans	25.78	8.00e-16	77.80
IUUC-Cja-018792	Callithrix jacchus	93.04	0.00e+00	667.00
IUUC-Cfa-020739	Canis familiaris	92.44	0.00e+00	690.00
IUUC-Cpo-022331	Cavia porcellus	91.28	0.00e+00	671.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	39.89	1.00e-36	145.00
IUUC-Csa-023414	Chlorocebus sabaeus	90.32	0.00e+00	694.00
IUUC-Cho-024600	Choloepus hoffmanni	90.77	1.00e-180	625.00
IUUC-Cin-025565	Ciona intestinalis	36.34	4.00e-63	234.00
IUUC-Csv-026294	Ciona savignyi	35.20	6.00e-62	231.00
IUUC-Cne-026979	Cryptococcus neoformans	32.99	7.00e-41	160.00
IUUC-Cme-027192	Cyanidioschyzon merolae	25.23	6.00e-21	95.10
IUUC-Dre-028492	Danio rerio	64.96	3.00e-128	451.00
IUUC-Dno-030050	Dasypus novemcinctus	89.12	1.00e-180	626.00
IUUC-Dor-030386	Dipodomys ordii	80.44	2.00e-168	584.00
IUUC-Dse-031203	Dothistroma septosporum	24.58	1.00e-12	67.80
IUUC-Dme-032012	Drosophila melanogaster	34.60	1.00e-59	223.00
IUUC-Ete-032491	Echinops telfairi	90.93	0.00e+00	676.00
IUUC-Eca-033583	Equus caballus	91.74	0.00e+00	691.00
IUUC-Eeu-034976	Erinaceus europaeus	95.13	8.00e-174	602.00
IUUC-Fca-036417	Felis catus	89.77	0.00e+00	664.00
IUUC-Gmo-039505	Gadus morhua	66.96	1.00e-139	488.00
IUUC-Ggr-039978	Gaeumannomyces graminis	24.92	2.00e-13	69.70
IUUC-Gga-040732	Gallus gallus	69.53	2.00e-144	505.00
IUUC-Gac-041313	Gasterosteus aculeatus	64.29	3.00e-134	471.00
IUUC-Gma-044122	Glycine max	40.68	6.00e-60	224.00
IUUC-Ggo-044748	Gorilla gorilla	91.13	0.00e+00	696.00
IUUC-Hsa-046943	Homo sapiens	91.13	0.00e+00	696.00
IUUC-Hvu-047659	Hordeum vulgare	37.89	4.00e-56	211.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	90.08	0.00e+00	651.00
IUUC-Lch-050331	Latimeria chalumnae	61.40	2.00e-114	405.00
IUUC-Lpe-051193	Leersia perrieri	40.14	2.00e-60	226.00
IUUC-Loc-051946	Lepisosteus oculatus	67.16	9.00e-135	474.00
IUUC-Mcc-055285	Macaca mulatta	92.98	4.00e-91	326.00
IUUC-Meu-056596	Macropus eugenii	84.75	2.00e-172	598.00
IUUC-Mor-056995	Magnaporthe oryzae	23.51	4.00e-12	65.50
IUUC-Mtr-058637	Medicago truncatula	40.74	1.00e-59	223.00
IUUC-Mga-059839	Meleagris gallopavo	67.48	4.00e-95	342.00
IUUC-Mdo-062868	Monodelphis domestica	85.47	4.00e-175	608.00
IUUC-Mmu-064305	Mus musculus	88.11	0.00e+00	658.00
IUUC-Mac-065041	Musa acuminata	39.08	5.00e-59	221.00
IUUC-Mpu-066779	Mustela putorius furo	91.80	0.00e+00	660.00
IUUC-Mlu-067223	Myotis lucifugus	92.63	0.00e+00	655.00
IUUC-Ncr-068919	Neurospora crassa	24.07	1.00e-07	51.20
IUUC-Nle-069852	Nomascus leucogenys	92.80	0.00e+00	666.00
IUUC-Ont-072452	Oreochromis niloticus	66.67	2.00e-139	488.00
IUUC-Oan-073163	Ornithorhynchus anatinus	82.07	5.00e-65	239.00
IUUC-Ocu-074628	Oryctolagus cuniculus	91.46	0.00e+00	684.00
IUUC-Oba-075868	Oryza barthii	39.44	1.00e-57	216.00
IUUC-Obr-076768	Oryza brachyantha	39.79	4.00e-59	221.00
IUUC-Ogl-077424	Oryza glaberrima	40.14	3.00e-60	225.00
IUUC-Ogu-078847	Oryza glumaepatula	39.79	4.00e-58	218.00
IUUC-Oin-079495	Oryza indica	40.14	3.00e-60	225.00
IUUC-Olo-080268	Oryza longistaminata	39.79	5.00e-58	218.00
IUUC-Ome-081709	Oryza meridionalis	39.62	1.00e-51	197.00
IUUC-Oni-082749	Oryza nivara	40.14	3.00e-60	225.00
IUUC-Opu-084023	Oryza punctata	33.45	9.00e-41	160.00
IUUC-Oru-084764	Oryza rufipogon	39.79	4.00e-58	218.00
IUUC-Osa-086009	Oryza sativa	40.14	3.00e-60	225.00
IUUC-Ola-086463	Oryzias latipes	63.11	7.00e-130	456.00
IUUC-Olu-087897	Ostreococcus lucimarinus	31.93	5.00e-44	171.00
IUUC-Oga-089114	Otolemur garnettii	90.27	0.00e+00	683.00
IUUC-Ptr-090556	Pan troglodytes	91.40	0.00e+00	698.00
IUUC-Pan-092828	Papio anubis	90.59	0.00e+00	695.00
IUUC-Psi-093609	Pelodiscus sinensis	72.92	3.00e-120	426.00
IUUC-Pma-094413	Petromyzon marinus	54.65	6.00e-102	363.00
IUUC-Ppa-095422	Physcomitrella patens	42.11	5.00e-67	248.00
IUUC-Pfo-096389	Poecilia formosa	65.77	2.00e-132	465.00
IUUC-Pab-098095	Pongo abelii	91.67	0.00e+00	698.00
IUUC-Pop-099612	Populus trichocarpa	35.80	7.00e-56	210.00
IUUC-Pca-100408	Procavia capensis	92.24	0.00e+00	681.00
IUUC-Ppe-101931	Prunus persica	39.32	3.00e-56	212.00
IUUC-Pva-102549	Pteropus vampyrus	89.26	0.00e+00	665.00
IUUC-Rno-105079	Rattus norvegicus	88.98	0.00e+00	675.00
IUUC-Sha-107299	Sarcophilus harrisii	85.29	1.00e-163	570.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	29.45	1.00e-22	100.00
IUUC-Spo-108122	Schizosaccharomyces pombe	29.12	6.00e-28	118.00
IUUC-Smo-109613	Selaginella moellendorffii	39.86	9.00e-53	200.00
IUUC-Sit-110263	Setaria italica	39.08	2.00e-58	219.00
IUUC-Sly-110988	Solanum lycopersicum	38.16	1.00e-54	206.00
IUUC-Stu-112713	Solanum tuberosum	38.52	1.00e-55	210.00
IUUC-Sbi-114617	Sorghum bicolor	38.03	4.00e-56	211.00
IUUC-Sre-115136	Sporisorium reilianum	30.68	2.00e-13	70.10
IUUC-Ssc-116268	Sus scrofa	91.33	0.00e+00	695.00
IUUC-Tgu-116720	Taeniopygia guttata	62.45	3.00e-89	322.00
IUUC-Tru-117977	Takifugu rubripes	66.96	8.00e-132	463.00
IUUC-Tsy-119121	Tarsius syrichta	90.91	8.00e-111	393.00
IUUC-Tni-119904	Tetraodon nigroviridis	68.75	2.00e-134	472.00
IUUC-Tca-121718	Theobroma cacao	41.34	1.00e-61	229.00
IUUC-Tae-124364	Triticum aestivum	38.25	2.00e-56	212.00
IUUC-Tme-126922	Tuber melanosporum	22.16	2.00e-13	70.50
IUUC-Tbe-127276	Tupaia belangeri	91.92	1.00e-153	535.00
IUUC-Uma-129505	Ustilago maydis	32.52	9.00e-14	71.20
IUUC-Vpa-130276	Vicugna pacos	92.83	9.00e-135	472.00
IUUC-Vvi-131377	Vitis vinifera	38.66	5.00e-59	223.00
IUUC-Xtr-132529	Xenopus tropicalis	67.51	2.00e-146	513.00
IUUC-Xma-134177	Xiphophorus maculatus	65.48	6.00e-125	440.00
IUUC-Yli-134665	Yarrowia lipolytica	23.13	6.00e-08	51.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence