iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014302

UUCD1 version

UUC-BrD-01231

Ensembl Protein ID

BRADI1G62257.1

UniProt Accession

I1H5E6; I1H5E6_BRADI

Genbank Protein ID

KQK21663.1; KQK21664.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880; CM000880

Gene Name

LOC100846442; BRADI_1g62257

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G62257	BRADI1G62257.1	BRADI1G62257.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-40	134.5	381	415
UBD/Beta-Prp	5.10e-67	226.7	215	436

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH  +v +++f ++  l+++Gs D+ +++WDlr  
   Q: 381  GHVKPVLGVSFsPNgYLVATGSEDNFCRIWDLRAR 415
           899*********77688899***********9875 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           ++ ++t   fs+d s+lat+s++g ikvw++ + +++++l+gh++  t+v fsp ++ l+t+s D+t+k+w+  +g+ ++++ gh d++  l+f+
   Q: 215  DDRPLTGCSFSRDASMLATSSWSGIIKVWSMPQITKIATLKGHTERATDVAFSPVDNCLATASADKTAKLWNS-DGSLLMSFDGHLDRLARLAFH 308
           5789999****************************************************************96.689****************** PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           psg++l ++s d+t r+wd++tg++l  +++gh+++v +v++hpdg+l +s++lD + r+Wdl++g+   +l+g h ++v  +sf++ng  +++g
   Q: 309  PSGKYLGTASFDKTWRLWDINTGKELL-LQEGHSRSVYGVSFHPDGSLAASCGLDAFARIWDLRSGRSYCHLEG-HVKPVLGVSFSPNGYLVATG 401
           ***************************.*********************************************9.******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfspn 233
           s+d+  ++wdl++ +++++  +h++ ++ v+f p+
   Q: 402  SEDNFCRIWDLRARKMLYSIPAHKSLISHVKFEPQ 436
           *******************************9976 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MENPRPPPPA ITPPMAPLPI HPPIAPIPAP PRAPVPAAPS TSGDDDDVEY EVSDDHRAAR 60
ERHERAVQEL LQRRRAYAMA VPTNDSAVRA RLRRLGEPIT LFGEREMERR DRLRALMVRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAACC CCAGGCCCCC GCCGCCAGCC ATCACGCCTC CCATGGCTCC CCTCCCCATA 60
CACCCGCCCA TCGCCCCCAT CCCCGCCCCT CCCCGCGCAC CCGTGCCCGC CGCCCCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

bdi:100846442

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	91.69	0.00e+00	771.00
IUUC-Aml-001737	Ailuropoda melanoleuca	44.40	9.00e-113	399.00
IUUC-Atr-002828	Amborella trichopoda	65.81	7.00e-180	622.00
IUUC-Apl-003723	Anas platyrhynchos	44.18	1.00e-112	399.00
IUUC-Aca-004972	Anolis carolinensis	44.42	4.00e-110	390.00
IUUC-Aly-006531	Arabidopsis lyrata	67.13	2.00e-164	571.00
IUUC-Ath-007367	Arabidopsis thaliana	65.56	2.00e-180	624.00
IUUC-Ago-007893	Ashbya gossypii	33.41	3.00e-55	208.00
IUUC-Acl-008236	Aspergillus clavatus	38.18	3.00e-78	285.00
IUUC-Afl-008522	Aspergillus flavus	37.80	4.00e-82	297.00
IUUC-Afu-008904	Aspergillus fumigatus	39.07	3.00e-84	305.00
IUUC-Ani-009198	Aspergillus nidulans	39.20	1.00e-84	306.00
IUUC-Ang-009662	Aspergillus niger	41.28	1.00e-86	312.00
IUUC-Aor-009881	Aspergillus oryzae	38.13	4.00e-82	298.00
IUUC-Ate-010333	Aspergillus terreus	39.26	1.00e-78	286.00
IUUC-Ame-011697	Astyanax mexicanus	42.03	7.00e-110	390.00
IUUC-Bgr-012254	Blumeria graminis	36.92	4.00e-83	301.00
IUUC-Bta-012615	Bos taurus	44.40	7.00e-113	400.00
IUUC-Bci-013720	Botrytis cinerea	37.10	5.00e-86	310.00
IUUC-Bol-015594	Brassica oleracea	66.89	4.00e-172	597.00
IUUC-Bra-017465	Brassica rapa	66.89	3.00e-172	597.00
IUUC-Cel-018632	Caenorhabditis elegans	38.52	4.00e-79	287.00
IUUC-Cja-019747	Callithrix jacchus	44.40	5.00e-113	400.00
IUUC-Cfa-020288	Canis familiaris	44.40	7.00e-113	400.00
IUUC-Cpo-021440	Cavia porcellus	44.27	9.00e-111	393.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	51.43	2.00e-94	338.00
IUUC-Csa-023139	Chlorocebus sabaeus	50.51	4.00e-92	330.00
IUUC-Cho-024481	Choloepus hoffmanni	43.93	5.00e-110	390.00
IUUC-Cin-025106	Ciona intestinalis	41.16	3.00e-98	351.00
IUUC-Csv-026087	Ciona savignyi	40.67	2.00e-95	342.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	36.16	3.00e-81	295.00
IUUC-Cne-026793	Cryptococcus neoformans	38.61	2.00e-90	325.00
IUUC-Dre-028723	Danio rerio	43.96	5.00e-110	390.00
IUUC-Dno-029299	Dasypus novemcinctus	44.18	1.00e-112	399.00
IUUC-Dse-031562	Dothistroma septosporum	35.08	4.00e-78	285.00
IUUC-Dme-031783	Drosophila melanogaster	42.58	3.00e-87	315.00
IUUC-Ete-032669	Echinops telfairi	44.52	1.00e-113	402.00
IUUC-Eca-033566	Equus caballus	44.40	8.00e-113	399.00
IUUC-Eeu-034524	Erinaceus europaeus	50.00	3.00e-71	261.00
IUUC-Fca-036215	Felis catus	44.40	7.00e-113	400.00
IUUC-Fal-037018	Ficedula albicollis	43.03	8.00e-93	333.00
IUUC-Fox-037936	Fusarium oxysporum	34.88	1.00e-75	276.00
IUUC-Fso-038366	Fusarium solani	35.83	2.00e-81	295.00
IUUC-Gmo-038966	Gadus morhua	44.38	4.00e-85	307.00
IUUC-Ggr-039942	Gaeumannomyces graminis	35.08	3.00e-73	268.00
IUUC-Gga-040797	Gallus gallus	44.91	1.00e-112	399.00
IUUC-Gac-042598	Gasterosteus aculeatus	43.41	7.00e-102	363.00
IUUC-Gma-044220	Glycine max	67.53	7.00e-174	602.00
IUUC-Ggo-044682	Gorilla gorilla	44.71	3.00e-112	398.00
IUUC-Hsa-045804	Homo sapiens	44.40	6.00e-113	400.00
IUUC-Hvu-047567	Hordeum vulgare	89.20	0.00e+00	740.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	44.61	3.00e-113	401.00
IUUC-Kpa-049369	Komagataella pastoris	35.04	4.00e-58	217.00
IUUC-Lch-050074	Latimeria chalumnae	43.56	6.00e-102	363.00
IUUC-Lpe-051333	Leersia perrieri	87.73	0.00e+00	704.00
IUUC-Loc-052164	Lepisosteus oculatus	44.82	1.00e-111	395.00
IUUC-Lma-053088	Leptosphaeria maculans	37.27	1.00e-76	280.00
IUUC-Laf-053460	Loxodonta africana	44.40	7.00e-113	400.00
IUUC-Mcc-055859	Macaca mulatta	44.40	7.00e-113	400.00
IUUC-Meu-056134	Macropus eugenii	43.97	2.00e-112	399.00
IUUC-Mor-057251	Magnaporthe oryzae	36.70	6.00e-83	300.00
IUUC-Mpo-057375	Magnaporthe poae	39.84	3.00e-51	194.00
IUUC-Mtr-057656	Medicago truncatula	67.70	2.00e-155	541.00
IUUC-Mla-059145	Melampsora laricipopulina	41.10	2.00e-87	315.00
IUUC-Mga-059855	Meleagris gallopavo	44.18	7.00e-113	400.00
IUUC-Mvi-060372	Microbotryum violaceum	40.85	2.00e-78	285.00
IUUC-Mmr-060826	Microcebus murinus	44.61	3.00e-113	401.00
IUUC-Mdo-062748	Monodelphis domestica	44.18	1.00e-112	399.00
IUUC-Mmu-063351	Mus musculus	44.40	1.00e-112	399.00
IUUC-Mac-064846	Musa acuminata	75.34	0.00e+00	625.00
IUUC-Mpu-066006	Mustela putorius furo	44.40	7.00e-113	400.00
IUUC-Mlu-067722	Myotis lucifugus	44.61	3.00e-113	401.00
IUUC-Nfi-068399	Neosartorya fischeri	39.07	3.00e-86	311.00
IUUC-Ncr-068711	Neurospora crassa	38.16	7.00e-88	317.00
IUUC-Nle-069982	Nomascus leucogenys	44.40	5.00e-113	400.00
IUUC-Opr-070596	Ochotona princeps	43.84	3.00e-112	397.00
IUUC-Ont-072374	Oreochromis niloticus	45.69	2.00e-106	378.00
IUUC-Oan-073166	Ornithorhynchus anatinus	46.24	2.00e-95	341.00
IUUC-Ocu-074371	Oryctolagus cuniculus	44.18	2.00e-112	398.00
IUUC-Oba-075083	Oryza barthii	88.98	0.00e+00	758.00
IUUC-Obr-076405	Oryza brachyantha	88.19	0.00e+00	719.00
IUUC-Ogl-077683	Oryza glaberrima	88.39	0.00e+00	756.00
IUUC-Ogu-078486	Oryza glumaepatula	87.96	0.00e+00	754.00
IUUC-Oin-079679	Oryza indica	88.12	0.00e+00	772.00
IUUC-Olo-080243	Oryza longistaminata	88.15	0.00e+00	673.00
IUUC-Ome-081230	Oryza meridionalis	87.74	0.00e+00	772.00
IUUC-Oni-082961	Oryza nivara	88.12	0.00e+00	772.00
IUUC-Opu-083189	Oryza punctata	88.17	0.00e+00	785.00
IUUC-Oru-084353	Oryza rufipogon	87.76	0.00e+00	741.00
IUUC-Osa-085458	Oryza sativa	87.74	0.00e+00	772.00
IUUC-Ola-086940	Oryzias latipes	45.40	2.00e-112	398.00
IUUC-Olu-087580	Ostreococcus lucimarinus	42.98	9.00e-80	290.00
IUUC-Oga-088703	Otolemur garnettii	42.76	2.00e-107	381.00
IUUC-Oar-089829	Ovis aries	44.61	4.00e-113	401.00
IUUC-Ptr-090838	Pan troglodytes	44.40	6.00e-113	400.00
IUUC-Pan-092261	Papio anubis	44.30	3.00e-111	394.00
IUUC-Psi-093020	Pelodiscus sinensis	43.53	1.00e-111	395.00
IUUC-Pno-094858	Phaeosphaeria nodorum	38.08	9.00e-79	286.00
IUUC-Ppa-095531	Physcomitrella patens	60.59	4.00e-160	557.00
IUUC-Pfo-096812	Poecilia formosa	42.73	1.00e-88	319.00
IUUC-Pab-097805	Pongo abelii	46.50	1.00e-91	329.00
IUUC-Pop-100051	Populus trichocarpa	68.19	1.00e-171	595.00
IUUC-Pca-100152	Procavia capensis	44.40	1.00e-112	399.00
IUUC-Ppe-101244	Prunus persica	66.29	4.00e-163	566.00
IUUC-Pva-102529	Pteropus vampyrus	42.46	5.00e-104	370.00
IUUC-Pgr-103550	Puccinia graminis	36.70	5.00e-88	317.00
IUUC-Ptt-103951	Puccinia triticina	36.78	4.00e-70	258.00
IUUC-Pte-104151	Pyrenophora teres	36.99	1.00e-70	259.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	36.99	2.00e-71	262.00
IUUC-Rno-105747	Rattus norvegicus	44.61	6.00e-113	400.00
IUUC-Sce-106418	Saccharomyces cerevisiae	33.41	1.00e-60	226.00
IUUC-Sha-107334	Sarcophilus harrisii	43.97	1.00e-112	399.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	36.73	2.00e-66	245.00
IUUC-Spo-108189	Schizosaccharomyces pombe	41.91	3.00e-90	324.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	36.03	3.00e-84	305.00
IUUC-Smo-108924	Selaginella moellendorffii	58.73	4.00e-157	547.00
IUUC-Sit-110102	Setaria italica	88.32	0.00e+00	767.00
IUUC-Sly-111668	Solanum lycopersicum	69.64	1.00e-170	592.00
IUUC-Stu-111928	Solanum tuberosum	69.87	2.00e-171	594.00
IUUC-Sar-113266	Sorex araneus	39.01	9.00e-95	340.00
IUUC-Sbi-114134	Sorghum bicolor	88.96	0.00e+00	770.00
IUUC-Sre-115114	Sporisorium reilianum	41.32	1.00e-90	326.00
IUUC-Ssc-115443	Sus scrofa	44.40	7.00e-113	400.00
IUUC-Tgu-117157	Taeniopygia guttata	44.62	2.00e-113	401.00
IUUC-Tru-118587	Takifugu rubripes	46.45	6.00e-110	390.00
IUUC-Tsy-119157	Tarsius syrichta	47.06	3.00e-98	351.00
IUUC-Tni-120427	Tetraodon nigroviridis	45.06	1.00e-108	385.00
IUUC-Tca-121368	Theobroma cacao	69.74	0.00e+00	642.00
IUUC-Tre-122074	Trichoderma reesei	36.81	2.00e-82	298.00
IUUC-Tvi-122349	Trichoderma virens	35.51	3.00e-80	291.00
IUUC-Tae-125651	Triticum aestivum	91.91	0.00e+00	795.00
IUUC-Tur-126532	Triticum urartu	91.20	0.00e+00	688.00
IUUC-Tme-126951	Tuber melanosporum	38.19	3.00e-81	295.00
IUUC-Tbe-128136	Tupaia belangeri	40.73	2.00e-97	348.00
IUUC-Ttr-129169	Tursiops truncatus	39.25	4.00e-53	201.00
IUUC-Uma-129399	Ustilago maydis	39.57	8.00e-86	310.00
IUUC-Vda-129842	Verticillium dahliae	37.65	1.00e-85	309.00
IUUC-Vpa-130440	Vicugna pacos	44.40	3.00e-113	401.00
IUUC-Vvi-131075	Vitis vinifera	68.31	9.00e-171	592.00
IUUC-Xma-133002	Xiphophorus maculatus	47.08	1.00e-93	335.00
IUUC-Yli-134569	Yarrowia lipolytica	36.36	1.00e-73	269.00
IUUC-Zma-135799	Zea mays	84.88	0.00e+00	774.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence