iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131395

Ensembl Protein ID

VIT_07s0141g00530.t01

UniProt Accession

F6HWI5; F6HWI5_VITVI

Genbank Protein ID

CCB59049.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596270

Gene Name

VIT_07s0141g00530

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_07s0141g00530	VIT_07s0141g00530.t01	VIT_07s0141g00530.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-11	42.9	398	431

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           + v++laf +d + l+s+++Dg i+ WDlrt ++
   Q: 398  GTVRSLAFtDDgKQLLSSGGDGHIYHWDLRTRTC 431
           68******988899***************99776 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSLISQNILP KNRINKTKRE DIDIPSPLEG NEDIEDRKEL GPDTSRIKRR KKERKEEEKQ 60
LEVEQEREMK KLENLLFGSL YAPVEFGKGG EEEVRDMVEK DSALFFTDRS ANSSVSVYEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTAA TTTCTCAAAA TATTCTCCCT AAGAACCGAA TCAATAAGAC TAAAAGGGAG 60
GATATTGATA TACCTTCACC TCTGGAAGGA AATGAAGATA TTGAAGACAG AAAAGAATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

vvi:100263672

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	60.03	0.00e+00	677.00
IUUC-Aml-002252	Ailuropoda melanoleuca	38.20	1.00e-76	279.00
IUUC-Ath-007244	Arabidopsis thaliana	64.70	0.00e+00	681.00
IUUC-Ago-007895	Ashbya gossypii	31.51	4.00e-50	191.00
IUUC-Acl-008343	Aspergillus clavatus	27.51	4.00e-48	185.00
IUUC-Afl-008445	Aspergillus flavus	29.40	2.00e-54	206.00
IUUC-Aor-009986	Aspergillus oryzae	29.68	1.00e-53	203.00
IUUC-Ame-011338	Astyanax mexicanus	40.00	2.00e-75	275.00
IUUC-Bgr-012201	Blumeria graminis	28.54	7.00e-49	187.00
IUUC-Bta-013058	Bos taurus	37.31	4.00e-78	284.00
IUUC-Bci-013619	Botrytis cinerea	29.26	5.00e-52	197.00
IUUC-Bdi-014771	Brachypodium distachyon	58.69	0.00e+00	635.00
IUUC-Bol-015230	Brassica oleracea	65.28	1.00e-177	615.00
IUUC-Cel-018293	Caenorhabditis elegans	27.23	5.00e-44	171.00
IUUC-Cja-019503	Callithrix jacchus	38.60	2.00e-77	281.00
IUUC-Cfa-020743	Canis familiaris	38.02	3.00e-77	281.00
IUUC-Cpo-021488	Cavia porcellus	42.12	2.00e-74	272.00
IUUC-Cre-022926	Chlamydomonas reinhardtii	41.03	5.00e-93	333.00
IUUC-Csa-023110	Chlorocebus sabaeus	37.99	5.00e-75	274.00
IUUC-Cin-025208	Ciona intestinalis	39.05	7.00e-73	266.00
IUUC-Dno-029243	Dasypus novemcinctus	38.26	2.00e-75	275.00
IUUC-Dor-030110	Dipodomys ordii	44.52	1.00e-75	276.00
IUUC-Dse-031217	Dothistroma septosporum	30.37	6.00e-53	201.00
IUUC-Dme-031999	Drosophila melanogaster	32.25	3.00e-50	191.00
IUUC-Eca-034350	Equus caballus	36.40	4.00e-75	274.00
IUUC-Eeu-034991	Erinaceus europaeus	42.90	1.00e-72	266.00
IUUC-Gga-040922	Gallus gallus	36.84	3.00e-79	288.00
IUUC-Gac-041475	Gasterosteus aculeatus	36.16	7.00e-70	257.00
IUUC-Ggo-044517	Gorilla gorilla	39.13	2.00e-76	279.00
IUUC-Hsa-045741	Homo sapiens	39.13	2.00e-76	278.00
IUUC-Hvu-047463	Hordeum vulgare	66.09	6.00e-67	245.00
IUUC-Itr-048128	Ictidomys tridecemlineatus	38.24	3.00e-78	285.00
IUUC-Kpa-049335	Komagataella pastoris	31.19	1.00e-58	219.00
IUUC-Lpe-051140	Leersia perrieri	59.23	0.00e+00	634.00
IUUC-Laf-054245	Loxodonta africana	38.26	1.00e-77	283.00
IUUC-Mor-057184	Magnaporthe oryzae	28.32	2.00e-41	162.00
IUUC-Mvi-060435	Microbotryum violaceum	34.93	3.00e-69	255.00
IUUC-Mdo-062187	Monodelphis domestica	42.64	8.00e-73	266.00
IUUC-Mmu-063386	Mus musculus	37.53	1.00e-78	286.00
IUUC-Mpu-066084	Mustela putorius furo	42.12	3.00e-75	275.00
IUUC-Mlu-068130	Myotis lucifugus	36.69	1.00e-74	273.00
IUUC-Nle-069743	Nomascus leucogenys	35.62	3.00e-64	238.00
IUUC-Opr-071111	Ochotona princeps	42.25	6.00e-76	277.00
IUUC-Ont-071979	Oreochromis niloticus	35.68	9.00e-75	273.00
IUUC-Ocu-073754	Oryctolagus cuniculus	38.07	4.00e-79	287.00
IUUC-Obr-076447	Oryza brachyantha	60.00	0.00e+00	652.00
IUUC-Ogu-078828	Oryza glumaepatula	63.58	0.00e+00	632.00
IUUC-Oin-080152	Oryza indica	63.38	0.00e+00	630.00
IUUC-Olo-080983	Oryza longistaminata	63.38	0.00e+00	629.00
IUUC-Oni-082443	Oryza nivara	63.78	0.00e+00	630.00
IUUC-Opu-083771	Oryza punctata	63.78	1.00e-178	618.00
IUUC-Oru-084272	Oryza rufipogon	63.38	0.00e+00	630.00
IUUC-Osa-085885	Oryza sativa	63.78	0.00e+00	637.00
IUUC-Oga-088834	Otolemur garnettii	39.38	2.00e-77	282.00
IUUC-Oar-089712	Ovis aries	37.09	5.00e-78	284.00
IUUC-Pan-092561	Papio anubis	38.44	7.00e-75	273.00
IUUC-Pfo-097068	Poecilia formosa	36.14	2.00e-73	269.00
IUUC-Ppe-101684	Prunus persica	77.78	0.00e+00	870.00
IUUC-Pva-102851	Pteropus vampyrus	37.16	7.00e-68	250.00
IUUC-Pgr-103370	Puccinia graminis	32.50	8.00e-62	230.00
IUUC-Ptt-103838	Puccinia triticina	30.72	1.00e-53	203.00
IUUC-Rno-104910	Rattus norvegicus	38.55	1.00e-78	286.00
IUUC-Sce-106258	Saccharomyces cerevisiae	31.37	2.00e-53	202.00
IUUC-Spo-108268	Schizosaccharomyces pombe	35.23	8.00e-76	276.00
IUUC-Smo-108815	Selaginella moellendorffii	49.80	3.00e-138	484.00
IUUC-Sit-109706	Setaria italica	60.17	0.00e+00	660.00
IUUC-Sbi-114747	Sorghum bicolor	61.59	0.00e+00	691.00
IUUC-Ssc-115916	Sus scrofa	38.38	2.00e-77	282.00
IUUC-Tsy-118928	Tarsius syrichta	43.46	2.00e-49	189.00
IUUC-Tca-121229	Theobroma cacao	75.75	0.00e+00	851.00
IUUC-Tae-123641	Triticum aestivum	60.31	0.00e+00	675.00
IUUC-Tur-126082	Triticum urartu	50.00	3.00e-104	370.00
IUUC-Ttr-128904	Tursiops truncatus	41.94	3.00e-61	228.00
IUUC-Vpa-130817	Vicugna pacos	37.47	4.00e-77	281.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence