iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cja-019700

UUCD1 version

UUC-CaJ-00467

Ensembl Protein ID

ENSCJAP00000035561.2

UniProt Accession

F7EGR4; F7EGR4_CALJA

Genbank Protein ID

JAB03801.1; JAB13645.1; JAB27757.1; JAB34094.1; JAB42184.1

Protein Name

mRNA export factor

Genbank Nucleotide ID

ACFV01098066; GAMS01009491; GAMR01006175; GAMQ01007757; GAMP01010571

Gene Name

RAE1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000019147.2	ENSCJAT00000037558.2	ENSCJAP00000035561.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-18	66.7	126	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgv 34
           H ++v  +++   ++   + +Gs+D+t+k WD+r+ +
   Q: 126  HDAPVKTIHWikaPNySCVMTGSWDKTLKFWDTRSSN 162
           999**********877789*************99865 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MSLFGTTSGF GTSGTSMFGS TTTDNHNPMK DIEVTSSPDD SIGCLSFSPP TLPGNFLIAG 60
SWANDVRCWE VQDSGQTIPK AQQMHTGPVL DVCWSDDGSK VFTASCDKTA KMWDLSSNQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCGCTTAG CAACTTGCAG CAGCTGCACC AACTTTGAAC CAATTCGCAA ACCGCTGGTA 60
TAAAGCGCTT TTGCGCATGT GCTGTCGCCT TGCGACCTTT TTCTTTGACG ATTTCCGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0005643--C:nuclear pore
GO:0003723--F:RNA binding
GO:0071407--P:cellular response to organic cyclic compound

KEGG

cjc:100403780

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	47.14	7.00e-83	300.00
IUUC-Aml-002179	Ailuropoda melanoleuca	99.42	0.00e+00	729.00
IUUC-Atr-002609	Amborella trichopoda	50.44	5.00e-94	337.00
IUUC-Apl-003637	Anas platyrhynchos	95.65	0.00e+00	704.00
IUUC-Aca-005042	Anolis carolinensis	95.65	0.00e+00	703.00
IUUC-Aly-006015	Arabidopsis lyrata	50.84	3.00e-98	351.00
IUUC-Ath-007659	Arabidopsis thaliana	50.56	6.00e-98	350.00
IUUC-Ago-008004	Ashbya gossypii	41.16	3.00e-73	268.00
IUUC-Acl-008030	Aspergillus clavatus	46.04	3.00e-81	295.00
IUUC-Afl-008636	Aspergillus flavus	46.04	7.00e-81	293.00
IUUC-Afu-009121	Aspergillus fumigatus	46.63	1.00e-82	299.00
IUUC-Ani-009238	Aspergillus nidulans	45.75	2.00e-80	292.00
IUUC-Ang-009801	Aspergillus niger	45.80	3.00e-82	298.00
IUUC-Aor-009974	Aspergillus oryzae	46.04	7.00e-81	293.00
IUUC-Ate-010406	Aspergillus terreus	45.75	9.00e-82	296.00
IUUC-Ame-011368	Astyanax mexicanus	91.88	0.00e+00	694.00
IUUC-Bgr-012233	Blumeria graminis	42.35	3.00e-70	258.00
IUUC-Bta-012856	Bos taurus	99.42	0.00e+00	729.00
IUUC-Bci-013964	Botrytis cinerea	45.16	1.00e-75	276.00
IUUC-Bdi-015050	Brachypodium distachyon	49.00	1.00e-85	310.00
IUUC-Bol-015367	Brassica oleracea	50.28	1.00e-94	340.00
IUUC-Bra-016903	Brassica rapa	50.28	1.00e-94	340.00
IUUC-Cel-018563	Caenorhabditis elegans	51.21	1.00e-100	360.00
IUUC-Cfa-020337	Canis familiaris	99.71	0.00e+00	730.00
IUUC-Cpo-021858	Cavia porcellus	99.13	0.00e+00	726.00
IUUC-Cre-022748	Chlamydomonas reinhardtii	44.63	1.00e-82	300.00
IUUC-Csa-023322	Chlorocebus sabaeus	99.71	0.00e+00	728.00
IUUC-Cho-024533	Choloepus hoffmanni	71.59	4.00e-136	477.00
IUUC-Cin-025393	Ciona intestinalis	72.36	5.00e-164	570.00
IUUC-Csv-026093	Ciona savignyi	72.16	1.00e-162	565.00
IUUC-Cgl-026503	Colletotrichum gloeosporioides	36.59	2.00e-53	202.00
IUUC-Cne-026774	Cryptococcus neoformans	42.53	9.00e-68	250.00
IUUC-Cme-027243	Cyanidioschyzon merolae	36.62	1.00e-65	243.00
IUUC-Dre-028159	Danio rerio	92.46	0.00e+00	696.00
IUUC-Dno-028852	Dasypus novemcinctus	99.71	0.00e+00	730.00
IUUC-Dor-030445	Dipodomys ordii	82.90	8.00e-167	579.00
IUUC-Dse-031161	Dothistroma septosporum	42.69	3.00e-66	245.00
IUUC-Dme-032009	Drosophila melanogaster	68.77	6.00e-148	516.00
IUUC-Eca-033306	Equus caballus	99.13	0.00e+00	726.00
IUUC-Fca-035579	Felis catus	99.71	0.00e+00	730.00
IUUC-Fal-037582	Ficedula albicollis	96.23	0.00e+00	709.00
IUUC-Fox-037772	Fusarium oxysporum	42.43	2.00e-72	266.00
IUUC-Fso-038368	Fusarium solani	41.96	7.00e-73	267.00
IUUC-Gmo-038500	Gadus morhua	89.86	0.00e+00	679.00
IUUC-Ggr-040019	Gaeumannomyces graminis	42.48	5.00e-73	268.00
IUUC-Gga-040684	Gallus gallus	96.23	0.00e+00	706.00
IUUC-Gac-042592	Gasterosteus aculeatus	91.01	0.00e+00	685.00
IUUC-Gma-043208	Glycine max	51.86	6.00e-95	340.00
IUUC-Ggo-044965	Gorilla gorilla	99.71	0.00e+00	728.00
IUUC-Hsa-046779	Homo sapiens	100.00	0.00e+00	670.00
IUUC-Hvu-047380	Hordeum vulgare	48.72	6.00e-87	314.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	99.42	0.00e+00	728.00
IUUC-Kpa-049284	Komagataella pastoris	42.19	2.00e-74	272.00
IUUC-Lch-050559	Latimeria chalumnae	81.13	5.00e-179	620.00
IUUC-Lpe-051050	Leersia perrieri	51.16	3.00e-94	338.00
IUUC-Loc-052874	Lepisosteus oculatus	91.59	0.00e+00	684.00
IUUC-Lma-053085	Leptosphaeria maculans	39.71	9.00e-64	237.00
IUUC-Laf-053980	Loxodonta africana	99.42	0.00e+00	729.00
IUUC-Mcc-055408	Macaca mulatta	100.00	0.00e+00	730.00
IUUC-Meu-056551	Macropus eugenii	89.35	0.00e+00	637.00
IUUC-Mor-057248	Magnaporthe oryzae	42.66	4.00e-75	275.00
IUUC-Mpo-057390	Magnaporthe poae	40.95	2.00e-72	265.00
IUUC-Mtr-057675	Medicago truncatula	51.12	2.00e-96	345.00
IUUC-Mla-059155	Melampsora laricipopulina	43.18	5.00e-85	307.00
IUUC-Mga-060140	Meleagris gallopavo	96.37	6.00e-180	622.00
IUUC-Mvi-060264	Microbotryum violaceum	43.07	1.00e-78	286.00
IUUC-Mmr-061533	Microcebus murinus	99.42	0.00e+00	728.00
IUUC-Mdo-062593	Monodelphis domestica	97.68	0.00e+00	719.00
IUUC-Mmu-063362	Mus musculus	99.42	0.00e+00	728.00
IUUC-Mac-064968	Musa acuminata	48.08	3.00e-84	305.00
IUUC-Mpu-065722	Mustela putorius furo	99.13	0.00e+00	729.00
IUUC-Mlu-068124	Myotis lucifugus	99.42	0.00e+00	728.00
IUUC-Nfi-068595	Neosartorya fischeri	46.63	1.00e-82	300.00
IUUC-Ncr-068790	Neurospora crassa	41.85	4.00e-74	271.00
IUUC-Nle-069395	Nomascus leucogenys	85.22	5.00e-171	593.00
IUUC-Opr-070320	Ochotona princeps	90.43	0.00e+00	649.00
IUUC-Ont-071303	Oreochromis niloticus	92.46	0.00e+00	694.00
IUUC-Oan-073724	Ornithorhynchus anatinus	96.81	0.00e+00	714.00
IUUC-Ocu-074961	Oryctolagus cuniculus	98.12	0.00e+00	666.00
IUUC-Oba-075879	Oryza barthii	51.64	5.00e-93	334.00
IUUC-Obr-076326	Oryza brachyantha	50.57	5.00e-94	337.00
IUUC-Ogl-077767	Oryza glaberrima	51.16	3.00e-94	338.00
IUUC-Ogu-078760	Oryza glumaepatula	50.14	2.00e-90	325.00
IUUC-Oin-080219	Oryza indica	51.16	3.00e-94	338.00
IUUC-Olo-081007	Oryza longistaminata	51.16	3.00e-94	338.00
IUUC-Ome-081848	Oryza meridionalis	47.55	6.00e-88	317.00
IUUC-Oni-082844	Oryza nivara	51.16	3.00e-94	338.00
IUUC-Opu-083511	Oryza punctata	47.81	9.00e-90	323.00
IUUC-Oru-085012	Oryza rufipogon	51.16	3.00e-94	338.00
IUUC-Osa-085287	Oryza sativa	51.16	3.00e-94	338.00
IUUC-Ola-087292	Oryzias latipes	91.88	0.00e+00	690.00
IUUC-Olu-087689	Ostreococcus lucimarinus	49.27	1.00e-91	329.00
IUUC-Oga-088821	Otolemur garnettii	99.71	0.00e+00	730.00
IUUC-Oar-090253	Ovis aries	99.71	0.00e+00	730.00
IUUC-Ptr-091097	Pan troglodytes	98.55	0.00e+00	721.00
IUUC-Pan-091835	Papio anubis	100.00	0.00e+00	730.00
IUUC-Psi-093000	Pelodiscus sinensis	95.95	0.00e+00	708.00
IUUC-Pma-094273	Petromyzon marinus	85.33	0.00e+00	681.00
IUUC-Pno-094920	Phaeosphaeria nodorum	38.50	2.00e-57	215.00
IUUC-Ppa-095202	Physcomitrella patens	52.04	5.00e-75	273.00
IUUC-Pfo-096388	Poecilia formosa	91.30	0.00e+00	701.00
IUUC-Pab-097533	Pongo abelii	100.00	0.00e+00	730.00
IUUC-Pop-099348	Populus trichocarpa	49.44	3.00e-90	325.00
IUUC-Pca-100638	Procavia capensis	79.73	3.00e-66	245.00
IUUC-Ppe-101817	Prunus persica	52.19	1.00e-95	342.00
IUUC-Pva-102233	Pteropus vampyrus	98.84	0.00e+00	722.00
IUUC-Pgr-103342	Puccinia graminis	45.14	4.00e-85	308.00
IUUC-Ptt-103836	Puccinia triticina	43.75	9.00e-87	313.00
IUUC-Pte-104387	Pyrenophora teres	40.87	5.00e-65	241.00
IUUC-Pyt-104737	Pyrenophora triticirepentis	39.52	1.00e-66	246.00
IUUC-Rno-105548	Rattus norvegicus	98.84	0.00e+00	724.00
IUUC-Sce-106379	Saccharomyces cerevisiae	41.69	1.00e-76	280.00
IUUC-Sha-107617	Sarcophilus harrisii	97.13	3.00e-146	510.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	45.79	4.00e-79	288.00
IUUC-Spo-108293	Schizosaccharomyces pombe	47.11	3.00e-87	315.00
IUUC-Smo-109611	Selaginella moellendorffii	50.42	2.00e-95	342.00
IUUC-Sit-110436	Setaria italica	49.28	9.00e-92	330.00
IUUC-Sly-111037	Solanum lycopersicum	49.19	9.00e-98	350.00
IUUC-Sbi-114361	Sorghum bicolor	48.35	3.00e-93	334.00
IUUC-Sre-114922	Sporisorium reilianum	40.12	7.00e-65	241.00
IUUC-Ssc-116305	Sus scrofa	99.71	0.00e+00	729.00
IUUC-Tgu-116751	Taeniopygia guttata	96.23	0.00e+00	707.00
IUUC-Tru-117798	Takifugu rubripes	91.59	0.00e+00	685.00
IUUC-Tsy-119523	Tarsius syrichta	99.64	7.00e-168	582.00
IUUC-Tni-120477	Tetraodon nigroviridis	91.64	0.00e+00	683.00
IUUC-Tca-121802	Theobroma cacao	50.70	1.00e-96	346.00
IUUC-Tre-121994	Trichoderma reesei	43.03	2.00e-70	259.00
IUUC-Tvi-122631	Trichoderma virens	42.43	9.00e-69	253.00
IUUC-Tae-124482	Triticum aestivum	50.29	2.00e-92	332.00
IUUC-Tur-126390	Triticum urartu	50.58	7.00e-93	333.00
IUUC-Tme-127152	Tuber melanosporum	47.93	8.00e-80	290.00
IUUC-Tbe-127319	Tupaia belangeri	84.92	6.00e-125	440.00
IUUC-Ttr-129207	Tursiops truncatus	98.55	0.00e+00	714.00
IUUC-Uma-129342	Ustilago maydis	39.65	6.00e-59	221.00
IUUC-Vda-129865	Verticillium dahliae	41.54	8.00e-74	270.00
IUUC-Vpa-130076	Vicugna pacos	89.44	2.00e-163	568.00
IUUC-Vvi-131104	Vitis vinifera	50.72	2.00e-95	342.00
IUUC-Xtr-132917	Xenopus tropicalis	73.85	4.00e-147	514.00
IUUC-Xma-133615	Xiphophorus maculatus	92.46	0.00e+00	695.00
IUUC-Yli-134431	Yarrowia lipolytica	40.48	1.00e-73	270.00
IUUC-Zma-135142	Zea mays	49.86	2.00e-93	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence