iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013363

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02031120

Gene Name

RMND5A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000021140.4	ENSBTAT00000028174.4	ENSBTAP00000028174.4

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	25.60	1.00e-24	108.00	IUUC-Sce-106260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Bos taurus

Protein Sequence
(Fasta)

MDQCVTVERE LEKVLHKFSG YGQLCERGLE ELIDYTGGLK HEILQSHGQD AELSGTLSLV 60
LTQCCKRIKD TVQKLASDHK DIHSSVSRVG KAIDKNFDSD ISSVGIDGCW QADSQRLLNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCAGT GCGTGACGGT GGAGCGCGAG CTGGAGAAGG TGCTGCACAA GTTCTCGGGC 60
TATGGGCAAC TGTGCGAGCG CGGCCTGGAG GAGCTCATCG ACTACACGGG TGGCCTCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013144--CRA_dom
IPR024964--CTLH/CRA
IPR006595--CTLH_C
IPR006594--LisH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50897--CTLH
PS50896--LISH

Pfam

PF10607--CLTH

SMART

SM00757--CRA
SM00668--CTLH
SM00667--LisH

Gene Ontology

GO:0005737--C:cytoplasm
GO:0034657--C:GID complex
GO:0005634--C:nucleus
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

bta:516731

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000501	Aegilops tauschii	37.78	2.00e-62	233.00
IUUC-Aml-001548	Ailuropoda melanoleuca	100.00	0.00e+00	811.00
IUUC-Atr-003004	Amborella trichopoda	34.35	4.00e-63	235.00
IUUC-Apl-003644	Anas platyrhynchos	96.08	0.00e+00	719.00
IUUC-Aca-005137	Anolis carolinensis	65.56	6.00e-147	513.00
IUUC-Aly-005615	Arabidopsis lyrata	39.16	1.00e-57	217.00
IUUC-Ath-007247	Arabidopsis thaliana	37.35	8.00e-59	220.00
IUUC-Ago-007826	Ashbya gossypii	43.37	8.00e-15	74.70
IUUC-Acl-008282	Aspergillus clavatus	32.26	2.00e-56	213.00
IUUC-Afl-008705	Aspergillus flavus	33.93	3.00e-61	229.00
IUUC-Afu-009079	Aspergillus fumigatus	30.07	2.00e-55	209.00
IUUC-Ani-009387	Aspergillus nidulans	33.78	1.00e-55	209.00
IUUC-Ang-009525	Aspergillus niger	29.52	4.00e-33	135.00
IUUC-Aor-009954	Aspergillus oryzae	33.87	1.00e-61	229.00
IUUC-Ate-010352	Aspergillus terreus	32.80	2.00e-56	213.00
IUUC-Ame-011850	Astyanax mexicanus	69.39	4.00e-166	577.00
IUUC-Bgr-012198	Blumeria graminis	33.15	5.00e-48	185.00
IUUC-Bci-013985	Botrytis cinerea	34.52	4.00e-58	218.00
IUUC-Bdi-014918	Brachypodium distachyon	33.42	6.00e-59	221.00
IUUC-Bol-015549	Brassica oleracea	33.78	7.00e-48	184.00
IUUC-Bra-017752	Brassica rapa	34.29	7.00e-53	201.00
IUUC-Cel-018146	Caenorhabditis elegans	26.06	2.00e-22	100.00
IUUC-Cja-019683	Callithrix jacchus	99.74	0.00e+00	808.00
IUUC-Cfa-020186	Canis familiaris	100.00	0.00e+00	811.00
IUUC-Cpo-021863	Cavia porcellus	100.00	0.00e+00	811.00
IUUC-Cre-022621	Chlamydomonas reinhardtii	39.42	7.00e-26	109.00
IUUC-Csa-023778	Chlorocebus sabaeus	100.00	0.00e+00	811.00
IUUC-Cho-024394	Choloepus hoffmanni	79.01	1.00e-155	541.00
IUUC-Cin-025509	Ciona intestinalis	48.73	5.00e-110	390.00
IUUC-Csv-025906	Ciona savignyi	48.21	1.00e-112	399.00
IUUC-Cgl-026770	Colletotrichum gloeosporioides	33.42	2.00e-50	192.00
IUUC-Cne-026984	Cryptococcus neoformans	27.93	8.00e-26	111.00
IUUC-Cme-027169	Cyanidioschyzon merolae	31.81	1.00e-48	187.00
IUUC-Dre-027541	Danio rerio	68.37	1.00e-164	572.00
IUUC-Dno-028947	Dasypus novemcinctus	71.30	1.00e-149	522.00
IUUC-Dor-030778	Dipodomys ordii	62.65	2.00e-157	548.00
IUUC-Dse-031216	Dothistroma septosporum	28.37	5.00e-41	161.00
IUUC-Dme-032053	Drosophila melanogaster	47.29	3.00e-88	318.00
IUUC-Ete-033138	Echinops telfairi	63.36	3.00e-150	524.00
IUUC-Eca-034297	Equus caballus	100.00	0.00e+00	811.00
IUUC-Fca-035452	Felis catus	68.45	3.00e-164	571.00
IUUC-Fal-037162	Ficedula albicollis	95.40	0.00e+00	781.00
IUUC-Fox-037791	Fusarium oxysporum	30.96	2.00e-50	193.00
IUUC-Fso-038261	Fusarium solani	32.61	3.00e-49	189.00
IUUC-Gmo-038538	Gadus morhua	68.62	1.00e-164	572.00
IUUC-Ggr-039758	Gaeumannomyces graminis	30.00	2.00e-48	186.00
IUUC-Gga-040152	Gallus gallus	95.40	0.00e+00	781.00
IUUC-Gac-042375	Gasterosteus aculeatus	68.88	4.00e-165	573.00
IUUC-Gma-043473	Glycine max	32.72	1.00e-51	197.00
IUUC-Ggo-044610	Gorilla gorilla	69.72	2.00e-166	578.00
IUUC-Hsa-046828	Homo sapiens	100.00	0.00e+00	811.00
IUUC-Hvu-047623	Hordeum vulgare	35.80	5.00e-61	228.00
IUUC-Itr-048574	Ictidomys tridecemlineatus	98.47	0.00e+00	798.00
IUUC-Kpa-049125	Komagataella pastoris	31.35	3.00e-42	165.00
IUUC-Lch-049725	Latimeria chalumnae	71.68	1.00e-171	595.00
IUUC-Lpe-051452	Leersia perrieri	36.83	2.00e-62	232.00
IUUC-Loc-052201	Lepisosteus oculatus	89.51	0.00e+00	743.00
IUUC-Lma-053061	Leptosphaeria maculans	32.72	8.00e-60	224.00
IUUC-Laf-054447	Loxodonta africana	68.70	2.00e-163	568.00
IUUC-Mcc-055378	Macaca mulatta	100.00	0.00e+00	811.00
IUUC-Meu-056571	Macropus eugenii	66.00	7.00e-158	550.00
IUUC-Mor-056969	Magnaporthe oryzae	31.36	4.00e-50	192.00
IUUC-Mpo-057427	Magnaporthe poae	30.65	3.00e-48	186.00
IUUC-Mtr-058293	Medicago truncatula	34.88	2.00e-58	219.00
IUUC-Mla-059074	Melampsora laricipopulina	29.25	8.00e-39	154.00
IUUC-Mga-059978	Meleagris gallopavo	95.40	0.00e+00	781.00
IUUC-Mvi-060298	Microbotryum violaceum	27.08	5.00e-27	115.00
IUUC-Mmr-061460	Microcebus murinus	97.70	0.00e+00	786.00
IUUC-Mdo-061921	Monodelphis domestica	66.33	9.00e-158	550.00
IUUC-Mmu-063553	Mus musculus	100.00	0.00e+00	811.00
IUUC-Mac-064452	Musa acuminata	35.67	8.00e-56	211.00
IUUC-Mpu-066545	Mustela putorius furo	100.00	0.00e+00	811.00
IUUC-Mlu-067713	Myotis lucifugus	68.70	4.00e-165	573.00
IUUC-Nfi-068340	Neosartorya fischeri	28.77	6.00e-53	201.00
IUUC-Ncr-068889	Neurospora crassa	38.71	7.00e-47	181.00
IUUC-Nle-069876	Nomascus leucogenys	68.70	2.00e-163	568.00
IUUC-Opr-070502	Ochotona princeps	65.34	6.00e-96	343.00
IUUC-Ont-072436	Oreochromis niloticus	68.88	5.00e-165	573.00
IUUC-Oan-072730	Ornithorhynchus anatinus	98.26	0.00e+00	707.00
IUUC-Ocu-073997	Oryctolagus cuniculus	100.00	0.00e+00	811.00
IUUC-Oba-075935	Oryza barthii	37.14	8.00e-62	230.00
IUUC-Ogl-077599	Oryza glaberrima	37.14	8.00e-62	230.00
IUUC-Ogu-079031	Oryza glumaepatula	36.83	2.00e-60	226.00
IUUC-Oin-079236	Oryza indica	37.14	8.00e-62	230.00
IUUC-Olo-080825	Oryza longistaminata	37.14	9.00e-62	230.00
IUUC-Ome-081998	Oryza meridionalis	37.14	1.00e-61	229.00
IUUC-Oni-082555	Oryza nivara	37.14	8.00e-62	230.00
IUUC-Opu-084156	Oryza punctata	37.14	2.00e-61	230.00
IUUC-Oru-085269	Oryza rufipogon	37.14	8.00e-62	230.00
IUUC-Osa-085795	Oryza sativa	37.14	8.00e-62	230.00
IUUC-Ola-087481	Oryzias latipes	68.45	2.00e-163	568.00
IUUC-Oga-088917	Otolemur garnettii	100.00	0.00e+00	811.00
IUUC-Oar-090104	Ovis aries	100.00	0.00e+00	811.00
IUUC-Ptr-090545	Pan troglodytes	69.72	2.00e-166	578.00
IUUC-Pan-091970	Papio anubis	100.00	0.00e+00	811.00
IUUC-Psi-093133	Pelodiscus sinensis	97.89	0.00e+00	680.00
IUUC-Pma-094313	Petromyzon marinus	75.81	1.00e-173	602.00
IUUC-Pno-094966	Phaeosphaeria nodorum	28.61	2.00e-51	196.00
IUUC-Ppa-095525	Physcomitrella patens	37.38	2.00e-60	226.00
IUUC-Pfo-096415	Poecilia formosa	68.43	3.00e-162	564.00
IUUC-Pab-098226	Pongo abelii	100.00	0.00e+00	811.00
IUUC-Pop-099161	Populus trichocarpa	36.11	7.00e-56	211.00
IUUC-Pca-100101	Procavia capensis	54.18	2.00e-75	276.00
IUUC-Ppe-101172	Prunus persica	35.49	3.00e-54	205.00
IUUC-Pva-102124	Pteropus vampyrus	82.61	1.00e-180	625.00
IUUC-Pgr-103586	Puccinia graminis	31.22	4.00e-26	112.00
IUUC-Pte-104149	Pyrenophora teres	32.47	7.00e-57	214.00
IUUC-Pyt-104577	Pyrenophora triticirepentis	31.67	3.00e-51	195.00
IUUC-Rno-105160	Rattus norvegicus	100.00	0.00e+00	811.00
IUUC-Sce-106260	Saccharomyces cerevisiae	25.60	5.00e-25	108.00
IUUC-Sha-107085	Sarcophilus harrisii	68.96	1.00e-165	575.00
IUUC-Sja-107986	Schizosaccharomyces japonicus	32.28	3.00e-36	145.00
IUUC-Spo-108054	Schizosaccharomyces pombe	29.97	1.00e-50	193.00
IUUC-Ssl-108439	Sclerotinia sclerotiorum	38.96	6.00e-55	207.00
IUUC-Smo-109084	Selaginella moellendorffii	37.39	2.00e-63	236.00
IUUC-Sit-109808	Setaria italica	36.92	2.00e-63	236.00
IUUC-Sly-111578	Solanum lycopersicum	33.95	2.00e-58	219.00
IUUC-Stu-112255	Solanum tuberosum	33.97	8.00e-58	217.00
IUUC-Sar-113433	Sorex araneus	83.67	7.00e-166	576.00
IUUC-Sbi-114206	Sorghum bicolor	36.62	2.00e-62	232.00
IUUC-Sre-115108	Sporisorium reilianum	34.76	2.00e-29	123.00
IUUC-Ssc-115466	Sus scrofa	100.00	0.00e+00	714.00
IUUC-Tgu-116744	Taeniopygia guttata	95.40	0.00e+00	781.00
IUUC-Tru-118729	Takifugu rubripes	68.37	5.00e-163	566.00
IUUC-Tsy-119164	Tarsius syrichta	100.00	0.00e+00	712.00
IUUC-Tni-119975	Tetraodon nigroviridis	68.37	3.00e-163	567.00
IUUC-Tca-121086	Theobroma cacao	34.91	4.00e-56	211.00
IUUC-Tre-122252	Trichoderma reesei	33.59	2.00e-49	189.00
IUUC-Tvi-122591	Trichoderma virens	33.16	5.00e-49	188.00
IUUC-Tae-122825	Triticum aestivum	37.78	6.00e-63	234.00
IUUC-Tur-126299	Triticum urartu	37.78	3.00e-62	232.00
IUUC-Tme-127008	Tuber melanosporum	35.86	4.00e-57	214.00
IUUC-Tbe-128119	Tupaia belangeri	98.94	0.00e+00	770.00
IUUC-Ttr-128810	Tursiops truncatus	62.50	2.00e-158	551.00
IUUC-Uma-129656	Ustilago maydis	33.02	5.00e-26	112.00
IUUC-Vda-129967	Verticillium dahliae	33.33	1.00e-43	170.00
IUUC-Vvi-131145	Vitis vinifera	36.23	7.00e-62	231.00
IUUC-Xtr-132522	Xenopus tropicalis	93.37	0.00e+00	757.00
IUUC-Xma-134046	Xiphophorus maculatus	68.88	2.00e-164	571.00
IUUC-Yli-134400	Yarrowia lipolytica	34.04	1.00e-49	190.00
IUUC-Zma-134785	Zea mays	36.62	6.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence