iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067909

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02006699

Gene Name

POC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000002893.2	ENSMLUT00000002891.2	ENSMLUP00000002626.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.50e-52	171.5	114	150
UBD/Beta-Prp	9.90e-66	222.0	3	198

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           Ht +v+c +f +d +l+vs+s D+tik+WD+++  ++
   Q: 114  HTHWVRCAKFsPDgRLIVSCSEDKTIKIWDTTSKQCV 150
           9**********999*****************998876 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG 112
           l+at+s+d  + +w+++++    ++ gh++ vt+v+fsp g++l+++s+Drt+++w ++++   + +k+h++ v+s++fs++g++l+++
   Q: 3    LIATASWDTFLMLWNFKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQYLATA 91
           69*************************************************************************************** PP
   S: 113  shdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsld 201
           s+d+ i+vw++  +  l+  l  h+++v+c++++pdg+l+vs+s D+t+++Wd  +++++  ++    +  + ++f++ng++++s++ d
   Q: 92   SEDKSIKVWNMYRQRFLY-SLCRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVSNFSD-SIGFANFVDFSPNGTCIASAGSD 178
           *****************9.********************************************98.*********************** PP
   S: 202  gtvklwdlqtgecvrtlngh 221
            tvk+wd++ ++ ++ ++ h
   Q: 179  HTVKIWDIRLNKLLQHYQVH 198
           *********99999999887 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

CFLIATASWD TFLMLWNFKP QARAFRYVGH KDVVTSVQFS PLGNLLASAS RDRTVRLWIP 60
DKRGKSSEFK AHTAPVRSVD FSADGQYLAT ASEDKSIKVW NMYRQRFLYS LCRHTHWVRC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTTCTTGA TAGCTACTGC TTCTTGGGAT ACATTTCTCA TGCTATGGAA TTTCAAGCCA 60
CAAGCTAGAG CTTTCAGATA CGTGGGTCAC AAGGACGTTG TAACCAGCGT GCAGTTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0008283--P:cell proliferation
GO:0060271--P:cilium assembly
GO:0001895--P:retina homeostasis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002219	Ailuropoda melanoleuca	89.01	0.00e+00	811.00
IUUC-Apl-004219	Anas platyrhynchos	62.73	3.00e-162	564.00
IUUC-Aca-005197	Anolis carolinensis	58.98	3.00e-158	551.00
IUUC-Ame-011000	Astyanax mexicanus	55.38	8.00e-146	509.00
IUUC-Bta-012706	Bos taurus	89.91	0.00e+00	823.00
IUUC-Cja-019185	Callithrix jacchus	86.97	0.00e+00	737.00
IUUC-Cfa-021274	Canis familiaris	90.34	0.00e+00	817.00
IUUC-Cpo-022351	Cavia porcellus	81.74	0.00e+00	749.00
IUUC-Csa-023032	Chlorocebus sabaeus	82.02	0.00e+00	733.00
IUUC-Cho-024508	Choloepus hoffmanni	80.00	0.00e+00	667.00
IUUC-Dre-028703	Danio rerio	55.66	3.00e-143	501.00
IUUC-Dno-028915	Dasypus novemcinctus	88.04	0.00e+00	813.00
IUUC-Dor-030306	Dipodomys ordii	83.62	2.00e-171	595.00
IUUC-Ete-032353	Echinops telfairi	71.00	5.00e-177	613.00
IUUC-Eca-034136	Equus caballus	90.54	0.00e+00	818.00
IUUC-Eeu-034611	Erinaceus europaeus	78.76	1.00e-177	615.00
IUUC-Fca-036205	Felis catus	88.74	0.00e+00	763.00
IUUC-Fal-036947	Ficedula albicollis	55.00	8.00e-135	473.00
IUUC-Gga-040847	Gallus gallus	60.41	2.00e-154	538.00
IUUC-Ggo-045194	Gorilla gorilla	87.87	0.00e+00	802.00
IUUC-Hsa-047026	Homo sapiens	88.09	0.00e+00	803.00
IUUC-Itr-048943	Ictidomys tridecemlineatus	84.04	0.00e+00	784.00
IUUC-Lch-050067	Latimeria chalumnae	58.04	3.00e-157	548.00
IUUC-Loc-052409	Lepisosteus oculatus	57.66	6.00e-151	527.00
IUUC-Laf-053428	Loxodonta africana	87.50	0.00e+00	784.00
IUUC-Mcc-054772	Macaca mulatta	88.09	0.00e+00	801.00
IUUC-Meu-056496	Macropus eugenii	75.15	2.00e-151	528.00
IUUC-Mga-059276	Meleagris gallopavo	61.43	5.00e-160	557.00
IUUC-Mmr-061525	Microcebus murinus	87.19	0.00e+00	796.00
IUUC-Mdo-062351	Monodelphis domestica	69.47	0.00e+00	665.00
IUUC-Mmu-063834	Mus musculus	79.24	0.00e+00	737.00
IUUC-Mpu-066453	Mustela putorius furo	86.52	0.00e+00	777.00
IUUC-Nle-069206	Nomascus leucogenys	87.64	0.00e+00	801.00
IUUC-Opr-070566	Ochotona princeps	74.16	0.00e+00	659.00
IUUC-Oan-073726	Ornithorhynchus anatinus	67.59	3.00e-174	604.00
IUUC-Ocu-074639	Oryctolagus cuniculus	88.09	0.00e+00	803.00
IUUC-Ola-086913	Oryzias latipes	51.57	4.00e-131	461.00
IUUC-Oga-088061	Otolemur garnettii	90.13	3.00e-175	607.00
IUUC-Oar-090228	Ovis aries	84.60	0.00e+00	808.00
IUUC-Ptr-091420	Pan troglodytes	88.09	0.00e+00	804.00
IUUC-Pan-092228	Papio anubis	87.87	0.00e+00	800.00
IUUC-Psi-093309	Pelodiscus sinensis	62.11	9.00e-158	549.00
IUUC-Pab-098109	Pongo abelii	88.31	0.00e+00	806.00
IUUC-Pca-101012	Procavia capensis	68.63	6.00e-161	560.00
IUUC-Pva-102712	Pteropus vampyrus	91.69	0.00e+00	832.00
IUUC-Rno-105260	Rattus norvegicus	79.46	0.00e+00	744.00
IUUC-Sar-113446	Sorex araneus	76.85	0.00e+00	697.00
IUUC-Ssc-115794	Sus scrofa	92.28	0.00e+00	659.00
IUUC-Tgu-116770	Taeniopygia guttata	55.28	3.00e-131	461.00
IUUC-Tru-117968	Takifugu rubripes	53.24	1.00e-132	466.00
IUUC-Tsy-119316	Tarsius syrichta	73.81	0.00e+00	649.00
IUUC-Tni-119953	Tetraodon nigroviridis	48.46	2.00e-114	406.00
IUUC-Tbe-128071	Tupaia belangeri	83.18	0.00e+00	732.00
IUUC-Ttr-129267	Tursiops truncatus	90.11	0.00e+00	819.00
IUUC-Vpa-130823	Vicugna pacos	81.01	2.00e-159	555.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence