iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-041093

Ensembl Protein ID

ENSGALP00000010875.4

UniProt Accession

F1NZW0; F1NZW0_CHICK

Genbank Protein ID

ENSGALP00000010875

Protein Name

Transcription initiation factor TFIID subunit 3

Genbank Nucleotide ID

AADN04000528

Gene Name

TAF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000006731.6	ENSGALT00000010889.6	ENSGALP00000010875.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.60e-09	37.0	868	915

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C+ C ++++++  ++ C++C++w+H+ C++++     p++ +w+C+kC +
   Q: 868  FCPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIT--AAPPEEMQWFCSKCAN 915
           7999****9998.7*******************..44444445******86 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MCETYSRWLL RVSVAQICQA LGWDSVQVSA CDLLTDVLQR YLQGLGRGCH RYCELYGRTD 60
PILDDVGDAF KLMGVNLHEL EDYIHNIEPV TFAHQIPSFP VSKNNVLQFP QPGSKDAEER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGGCGCC AAGATGGCGG TGGCGGCGGC GGGCCCTGCG TGAGCCTCCC GCGGCCCTCC 60
CGGCCCAGGG CGGGCGCGGG CGGCGCGGAG CCGAGCCCAG CCGGCATGTG CGAGACGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR006565--BTP
IPR009072--Histone-fold
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF07524--Bromo_TP
PF00628--PHD

SMART

SM00576--BTP
SM00249--PHD

Gene Ontology

GO:0031965--C:nuclear membrane
GO:0005669--C:transcription factor TFIID complex
GO:0008270--F:zinc ion binding
GO:0051457--P:maintenance of protein location in nucleus
GO:0043433--P:negative regulation of sequence-specific DNA binding transcription factor activity
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003831	Anas platyrhynchos	94.57	0.00e+00	706.00
IUUC-Bta-012541	Bos taurus	73.88	6.00e-167	581.00
IUUC-Cel-018700	Caenorhabditis elegans	53.06	6.00e-14	73.20
IUUC-Cja-019753	Callithrix jacchus	74.56	3.00e-86	312.00
IUUC-Cfa-021153	Canis familiaris	79.26	8.00e-157	547.00
IUUC-Cpo-022178	Cavia porcellus	75.83	3.00e-170	592.00
IUUC-Csa-023797	Chlorocebus sabaeus	79.84	2.00e-158	553.00
IUUC-Cho-024357	Choloepus hoffmanni	72.98	2.00e-58	220.00
IUUC-Cin-025173	Ciona intestinalis	62.50	5.00e-26	109.00
IUUC-Csv-026292	Ciona savignyi	58.57	7.00e-24	104.00
IUUC-Dno-029644	Dasypus novemcinctus	73.94	3.00e-161	562.00
IUUC-Dme-031631	Drosophila melanogaster	38.17	9.00e-25	109.00
IUUC-Eeu-034542	Erinaceus europaeus	74.01	8.00e-87	315.00
IUUC-Fca-035867	Felis catus	69.59	7.00e-109	388.00
IUUC-Fal-037442	Ficedula albicollis	91.50	0.00e+00	958.00
IUUC-Gac-041347	Gasterosteus aculeatus	48.16	2.00e-99	356.00
IUUC-Hsa-047012	Homo sapiens	80.04	7.00e-161	561.00
IUUC-Itr-048120	Ictidomys tridecemlineatus	78.88	7.00e-154	538.00
IUUC-Lch-049593	Latimeria chalumnae	69.19	6.00e-76	278.00
IUUC-Loc-052228	Lepisosteus oculatus	92.21	5.00e-43	167.00
IUUC-Laf-054492	Loxodonta africana	78.15	5.00e-174	604.00
IUUC-Mcc-054754	Macaca mulatta	79.84	4.00e-159	555.00
IUUC-Mmr-061146	Microcebus murinus	76.41	0.00e+00	663.00
IUUC-Mdo-062034	Monodelphis domestica	86.41	0.00e+00	690.00
IUUC-Mmu-063928	Mus musculus	71.65	2.00e-171	596.00
IUUC-Mpu-066634	Mustela putorius furo	78.63	2.00e-155	543.00
IUUC-Mlu-067116	Myotis lucifugus	71.38	2.00e-85	310.00
IUUC-Nle-069177	Nomascus leucogenys	73.33	5.00e-160	558.00
IUUC-Opr-070692	Ochotona princeps	91.85	2.00e-72	267.00
IUUC-Oan-073680	Ornithorhynchus anatinus	84.63	9.00e-134	470.00
IUUC-Ocu-074944	Oryctolagus cuniculus	80.08	6.00e-172	597.00
IUUC-Oga-088921	Otolemur garnettii	74.22	0.00e+00	670.00
IUUC-Oar-089568	Ovis aries	70.66	1.00e-141	497.00
IUUC-Ptr-090531	Pan troglodytes	80.04	8.00e-161	560.00
IUUC-Pan-092733	Papio anubis	80.04	3.00e-159	555.00
IUUC-Psi-093411	Pelodiscus sinensis	82.65	0.00e+00	661.00
IUUC-Pma-094511	Petromyzon marinus	65.00	8.00e-26	112.00
IUUC-Pfo-096336	Poecilia formosa	51.95	2.00e-93	337.00
IUUC-Pab-098458	Pongo abelii	78.21	5.00e-153	535.00
IUUC-Pva-102128	Pteropus vampyrus	74.43	8.00e-157	547.00
IUUC-Rno-105180	Rattus norvegicus	78.53	7.00e-161	561.00
IUUC-Sha-107070	Sarcophilus harrisii	82.94	8.00e-95	341.00
IUUC-Ssc-115657	Sus scrofa	70.45	3.00e-88	319.00
IUUC-Tgu-117228	Taeniopygia guttata	92.26	0.00e+00	981.00
IUUC-Tru-117787	Takifugu rubripes	54.92	1.00e-111	397.00
IUUC-Tni-119879	Tetraodon nigroviridis	50.43	3.00e-110	392.00
IUUC-Tbe-127747	Tupaia belangeri	70.50	5.00e-161	561.00
IUUC-Ttr-128397	Tursiops truncatus	92.42	8.00e-72	264.00
IUUC-Xtr-132570	Xenopus tropicalis	59.05	5.00e-167	581.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence