iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105773

Ensembl Protein ID

ENSRNOP00000046551.3

UniProt Accession

D3ZKN9; D3ZKN9_RAT

Genbank Protein ID

ENSRNOP00000046551

Protein Name

DDB1 and CUL4-associated factor 12-like 2

Genbank Nucleotide ID

AABR07041455

Gene Name

Dcaf12l2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000031533.3	ENSRNOT00000047171.3	ENSRNOP00000046551.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-20	70.7	208	238

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDl 30
           gH d+++++a+ sdt  vsGs+Dgt+ +W++
   Q: 208  GHRDWIFAIAWmSDTVAVSGSRDGTVALWRV 238
           8************9***************97 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

AASAARPPPT MAPQQTGSRK RKASEVEQGA GTSSSPGRAA AAAGTGQADG PLLLAKRPRR 60
PVARRSVVHY LKGRALGAYG HPGLVGFEGD LRSYGVLRLP ELLRERQLAL GPLNKVFASQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGCCTCTG CAGCCCGCCC GCCGCCCACC ATGGCCCCTC AGCAAACAGG TAGCAGGAAA 60
CGGAAAGCTT CAGAGGTTGA ACAGGGCGCT GGGACTTCTT CTTCGCCTGG GCGGGCGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001665	Ailuropoda melanoleuca	85.48	0.00e+00	681.00
IUUC-Cja-019567	Callithrix jacchus	79.15	0.00e+00	715.00
IUUC-Cfa-021077	Canis familiaris	85.54	0.00e+00	682.00
IUUC-Cpo-022378	Cavia porcellus	80.30	0.00e+00	654.00
IUUC-Csa-024224	Chlorocebus sabaeus	77.07	0.00e+00	688.00
IUUC-Dno-029097	Dasypus novemcinctus	77.45	0.00e+00	678.00
IUUC-Dor-030162	Dipodomys ordii	76.10	0.00e+00	631.00
IUUC-Dme-031774	Drosophila melanogaster	42.63	2.00e-72	266.00
IUUC-Fca-035737	Felis catus	86.86	0.00e+00	659.00
IUUC-Ggo-044768	Gorilla gorilla	81.70	0.00e+00	737.00
IUUC-Hsa-046326	Homo sapiens	81.28	0.00e+00	731.00
IUUC-Itr-049055	Ictidomys tridecemlineatus	82.24	0.00e+00	714.00
IUUC-Laf-054329	Loxodonta africana	80.65	0.00e+00	680.00
IUUC-Mcc-055186	Macaca mulatta	81.70	0.00e+00	736.00
IUUC-Mmr-060825	Microcebus murinus	79.79	0.00e+00	708.00
IUUC-Mmu-063116	Mus musculus	97.45	0.00e+00	848.00
IUUC-Mpu-066373	Mustela putorius furo	85.58	0.00e+00	683.00
IUUC-Mlu-067830	Myotis lucifugus	78.59	0.00e+00	675.00
IUUC-Nle-070092	Nomascus leucogenys	74.68	0.00e+00	682.00
IUUC-Ocu-074938	Oryctolagus cuniculus	73.26	0.00e+00	669.00
IUUC-Oga-088793	Otolemur garnettii	81.91	0.00e+00	691.00
IUUC-Oar-089810	Ovis aries	79.15	0.00e+00	723.00
IUUC-Ptr-091017	Pan troglodytes	81.70	0.00e+00	737.00
IUUC-Pan-091736	Papio anubis	75.16	0.00e+00	699.00
IUUC-Pab-098366	Pongo abelii	74.26	0.00e+00	686.00
IUUC-Pca-100731	Procavia capensis	69.77	3.00e-177	614.00
IUUC-Pva-102699	Pteropus vampyrus	85.28	0.00e+00	744.00
IUUC-Ssc-115607	Sus scrofa	82.13	0.00e+00	721.00
IUUC-Ttr-128938	Tursiops truncatus	86.06	0.00e+00	697.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence