iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108212

Ensembl Protein ID

SPAC6G10.11c.1:pep

UniProt Accession

P0C016; O13697; O14257; P0C014; Q76PD0; Q9HDZ4; RS27A_SCHPO

Genbank Protein ID

CAB11297.1

Protein Name

Ubiquitin-40S ribosomal protein S27a; Ubiquitin; 40S ribosomal protein S27a

Genbank Nucleotide ID

CU329670

Gene Name

ubi3; SPAC6G10.11c

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC6G10.11c	SPAC6G10.11c.1	SPAC6G10.11c.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Post-translational Modifications (PTMs)
dbPAF	dbPTM
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	7.70e-42	139.6	1	76
ULD/UDP/UBQ/UBQ_PIM	3.80e-29	98.6	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k ++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Ribosomal protein S27a is part of the 40S ribosomal subunit.

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKSKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGGKKR KKKTYTTPKK IKHKHKKVEL AVLKYYKVED DGSVKRLRRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCACAATGCA ACATCAATAT TTTCCTCCAT CCGCGAGGAA GAGGCAATAC TTTGCTGACG 60
ATGCAGATCT TTGTAAAAAC CCTTACGGGT AAGACCATTA CCCTTGAGGT TGAATCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein
KW-0832--Ubl conjugation
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0022627--C:cytosolic small ribosomal subunit
GO:0005634--C:nucleus
GO:0046872--F:metal ion binding
GO:0003735--F:structural constituent of ribosome
GO:0002181--P:cytoplasmic translation
GO:0042254--P:ribosome biogenesis

KEGG

spo:SPAC6G10.11c

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001873	Ailuropoda melanoleuca	83.67	7.00e-46	174.00
IUUC-Atr-003002	Amborella trichopoda	82.99	5.00e-53	197.00
IUUC-Aca-005055	Anolis carolinensis	83.67	1.00e-52	196.00
IUUC-Aly-005675	Arabidopsis lyrata	85.71	2.00e-53	199.00
IUUC-Ath-006984	Arabidopsis thaliana	85.71	2.00e-53	199.00
IUUC-Ago-007733	Ashbya gossypii	82.43	1.00e-48	183.00
IUUC-Acl-008099	Aspergillus clavatus	86.39	6.00e-52	194.00
IUUC-Ani-009265	Aspergillus nidulans	85.71	9.00e-52	193.00
IUUC-Ang-009629	Aspergillus niger	87.07	8.00e-52	193.00
IUUC-Ate-010436	Aspergillus terreus	86.39	8.00e-52	193.00
IUUC-Bgr-011984	Blumeria graminis	82.89	1.00e-54	203.00
IUUC-Bta-012585	Bos taurus	83.67	7.00e-46	174.00
IUUC-Bdi-014571	Brachypodium distachyon	85.81	3.00e-50	188.00
IUUC-Cja-019661	Callithrix jacchus	82.99	2.00e-45	172.00
IUUC-Cfa-020795	Canis familiaris	83.67	7.00e-46	174.00
IUUC-Csa-023120	Chlorocebus sabaeus	83.67	7.00e-46	174.00
IUUC-Cin-025785	Ciona intestinalis	83.12	1.00e-51	193.00
IUUC-Csv-026028	Ciona savignyi	80.00	5.00e-44	167.00
IUUC-Cgl-026423	Colletotrichum gloeosporioides	81.94	8.00e-46	174.00
IUUC-Dno-029073	Dasypus novemcinctus	83.67	6.00e-46	174.00
IUUC-Dse-031483	Dothistroma septosporum	81.05	8.00e-53	197.00
IUUC-Dme-032068	Drosophila melanogaster	83.78	5.00e-47	177.00
IUUC-Eca-034346	Equus caballus	83.67	4.00e-46	175.00
IUUC-Fca-035555	Felis catus	83.67	7.00e-46	174.00
IUUC-Fal-037049	Ficedula albicollis	83.67	6.00e-46	174.00
IUUC-Fox-037994	Fusarium oxysporum	85.81	5.00e-54	201.00
IUUC-Fso-038121	Fusarium solani	87.07	3.00e-55	205.00
IUUC-Ggr-039996	Gaeumannomyces graminis	88.44	1.00e-53	199.00
IUUC-Gga-040938	Gallus gallus	83.67	6.00e-46	174.00
IUUC-Gac-041956	Gasterosteus aculeatus	83.67	1.00e-45	173.00
IUUC-Gma-043007	Glycine max	86.39	2.00e-54	202.00
IUUC-Ggo-044980	Gorilla gorilla	83.67	7.00e-46	174.00
IUUC-Hsa-046329	Homo sapiens	83.67	7.00e-46	174.00
IUUC-Itr-047994	Ictidomys tridecemlineatus	83.67	7.00e-46	174.00
IUUC-Kpa-049159	Komagataella pastoris	87.16	3.00e-56	208.00
IUUC-Lch-050032	Latimeria chalumnae	83.67	7.00e-46	174.00
IUUC-Lma-053163	Leptosphaeria maculans	86.39	3.00e-54	201.00
IUUC-Laf-054502	Loxodonta africana	79.26	4.00e-35	138.00
IUUC-Mcc-055895	Macaca mulatta	83.67	7.00e-46	174.00
IUUC-Meu-056529	Macropus eugenii	83.67	7.00e-46	174.00
IUUC-Mor-056959	Magnaporthe oryzae	88.44	1.00e-53	199.00
IUUC-Mpo-057436	Magnaporthe poae	88.44	1.00e-53	199.00
IUUC-Mtr-058225	Medicago truncatula	86.39	1.00e-54	203.00
IUUC-Mvi-060484	Microbotryum violaceum	82.67	1.00e-52	197.00
IUUC-Mmr-060710	Microcebus murinus	83.67	9.00e-53	196.00
IUUC-Mdo-062150	Monodelphis domestica	82.55	1.00e-44	170.00
IUUC-Mmu-064336	Mus musculus	82.99	2.00e-45	172.00
IUUC-Mac-064616	Musa acuminata	85.81	4.00e-53	197.00
IUUC-Mpu-066613	Mustela putorius furo	83.67	7.00e-46	174.00
IUUC-Mlu-067676	Myotis lucifugus	83.67	7.00e-46	174.00
IUUC-Ncr-068635	Neurospora crassa	86.09	7.00e-54	200.00
IUUC-Nle-069607	Nomascus leucogenys	80.95	2.00e-43	166.00
IUUC-Ont-071636	Oreochromis niloticus	83.67	1.00e-45	173.00
IUUC-Oan-073638	Ornithorhynchus anatinus	83.67	6.00e-46	174.00
IUUC-Ocu-074497	Oryctolagus cuniculus	83.67	7.00e-46	174.00
IUUC-Oba-075488	Oryza barthii	85.81	3.00e-50	188.00
IUUC-Obr-076335	Oryza brachyantha	85.81	4.00e-50	188.00
IUUC-Ogl-077625	Oryza glaberrima	86.49	7.00e-53	197.00
IUUC-Oin-080161	Oryza indica	85.81	3.00e-50	188.00
IUUC-Ome-081322	Oryza meridionalis	85.81	3.00e-50	188.00
IUUC-Oru-084379	Oryza rufipogon	86.49	7.00e-53	197.00
IUUC-Osa-086116	Oryza sativa	86.49	7.00e-53	197.00
IUUC-Olu-087619	Ostreococcus lucimarinus	80.67	5.00e-44	167.00
IUUC-Oar-090107	Ovis aries	83.67	5.00e-46	174.00
IUUC-Ptr-090693	Pan troglodytes	83.67	7.00e-46	174.00
IUUC-Pan-092065	Papio anubis	83.67	7.00e-46	174.00
IUUC-Ppa-095915	Physcomitrella patens	86.39	7.00e-55	204.00
IUUC-Pab-098246	Pongo abelii	70.75	1.00e-43	166.00
IUUC-Pop-099203	Populus trichocarpa	86.39	1.00e-54	203.00
IUUC-Ppe-101784	Prunus persica	86.39	1.00e-54	203.00
IUUC-Pva-102665	Pteropus vampyrus	83.67	4.00e-46	174.00
IUUC-Ptt-103852	Puccinia triticina	66.45	2.00e-44	170.00
IUUC-Rno-105805	Rattus norvegicus	82.99	2.00e-45	172.00
IUUC-Sly-111035	Solanum lycopersicum	86.39	1.00e-54	203.00
IUUC-Stu-112470	Solanum tuberosum	86.39	1.00e-54	203.00
IUUC-Sbi-114338	Sorghum bicolor	85.81	2.00e-52	196.00
IUUC-Sre-114920	Sporisorium reilianum	81.46	2.00e-53	199.00
IUUC-Ssc-115514	Sus scrofa	83.67	7.00e-46	174.00
IUUC-Tru-118475	Takifugu rubripes	83.67	1.00e-45	173.00
IUUC-Tsy-119447	Tarsius syrichta	83.67	6.00e-46	174.00
IUUC-Tni-119751	Tetraodon nigroviridis	80.92	9.00e-36	140.00
IUUC-Tca-121126	Theobroma cacao	86.39	1.00e-54	203.00
IUUC-Tae-125626	Triticum aestivum	85.81	3.00e-50	188.00
IUUC-Ttr-128453	Tursiops truncatus	83.67	7.00e-46	174.00
IUUC-Uma-129571	Ustilago maydis	80.13	4.00e-53	198.00
IUUC-Vpa-130119	Vicugna pacos	63.95	6.00e-24	101.00
IUUC-Xtr-131977	Xenopus tropicalis	74.83	1.00e-37	146.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence