iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013534

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD repeat domain 41

Genbank Nucleotide ID

DAAA02027769

Gene Name

WDR41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000020212.5	ENSBTAT00000026917.3	ENSBTAP00000026917.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-19	68.3	322	354

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcla.fsdtllvsGsdDgtikvWDlrtg 33
           H +sv  +a ++++ ++s+s Dg++++W+lr+ 
   Q: 322  HDSSVLHVAkLPNRQVISCSEDGSVRIWELREK 354
           888888887677799**************9875 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MLRWLIGGGR EPQGLAEKSP LQTIGEEQTQ NPYTELLVLK AHHDIVRYLV QLDDSRFASA 60
GDDGTVVVWN AQTGEKLLEL NGHTQKITAI ITLPCLETCE EKNQLILTAS ADRTVIEWDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAGGTATC AGAGTGCGCT GTGCTGCTAT CGGGGACCAG GAAGAGGCCG GGCTTGCGCG 60
GAGTTGAGGT TGACCTGGGC CGGGGCCCGC GCGACGCCGT CGCTGCCCGG ATGTTGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032045--C:guanyl-nucleotide exchange factor complex
GO:0005765--C:lysosomal membrane
GO:0017112--F:Rab guanyl-nucleotide exchange factor activity

KEGG

bta:514919

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001900	Ailuropoda melanoleuca	89.59	0.00e+00	856.00
IUUC-Apl-004087	Anas platyrhynchos	74.29	0.00e+00	632.00
IUUC-Aca-005359	Anolis carolinensis	71.40	0.00e+00	673.00
IUUC-Ame-010669	Astyanax mexicanus	42.95	2.00e-76	279.00
IUUC-Cja-019219	Callithrix jacchus	87.80	0.00e+00	821.00
IUUC-Cfa-020310	Canis familiaris	90.29	0.00e+00	831.00
IUUC-Cpo-021664	Cavia porcellus	86.84	0.00e+00	833.00
IUUC-Csa-024228	Chlorocebus sabaeus	89.54	0.00e+00	861.00
IUUC-Cho-024898	Choloepus hoffmanni	85.20	1.00e-111	396.00
IUUC-Dre-028538	Danio rerio	53.28	2.00e-126	445.00
IUUC-Dno-028861	Dasypus novemcinctus	86.33	0.00e+00	826.00
IUUC-Dor-030111	Dipodomys ordii	86.06	0.00e+00	827.00
IUUC-Ete-032444	Echinops telfairi	85.05	6.00e-156	543.00
IUUC-Eca-033676	Equus caballus	88.45	0.00e+00	842.00
IUUC-Eeu-034571	Erinaceus europaeus	78.43	0.00e+00	739.00
IUUC-Fca-035387	Felis catus	89.80	0.00e+00	853.00
IUUC-Fal-037310	Ficedula albicollis	73.08	0.00e+00	676.00
IUUC-Gmo-039224	Gadus morhua	54.15	1.00e-129	456.00
IUUC-Gga-040957	Gallus gallus	74.60	0.00e+00	686.00
IUUC-Gac-042385	Gasterosteus aculeatus	55.48	6.00e-141	493.00
IUUC-Ggo-044973	Gorilla gorilla	88.96	0.00e+00	853.00
IUUC-Hsa-046842	Homo sapiens	89.98	0.00e+00	860.00
IUUC-Itr-048784	Ictidomys tridecemlineatus	88.51	2.00e-172	598.00
IUUC-Lch-049625	Latimeria chalumnae	62.20	4.00e-168	583.00
IUUC-Loc-052368	Lepisosteus oculatus	58.55	4.00e-151	527.00
IUUC-Laf-053678	Loxodonta africana	86.21	0.00e+00	819.00
IUUC-Mcc-055184	Macaca mulatta	89.21	0.00e+00	828.00
IUUC-Meu-056165	Macropus eugenii	74.38	0.00e+00	677.00
IUUC-Mga-060184	Meleagris gallopavo	71.52	2.00e-61	227.00
IUUC-Mmr-060965	Microcebus murinus	89.11	0.00e+00	847.00
IUUC-Mdo-062702	Monodelphis domestica	82.71	0.00e+00	798.00
IUUC-Mmu-063649	Mus musculus	77.92	5.00e-113	400.00
IUUC-Mpu-065747	Mustela putorius furo	88.89	0.00e+00	854.00
IUUC-Mlu-067873	Myotis lucifugus	90.22	0.00e+00	859.00
IUUC-Nle-069670	Nomascus leucogenys	89.98	0.00e+00	858.00
IUUC-Opr-070266	Ochotona princeps	78.87	0.00e+00	751.00
IUUC-Ont-071242	Oreochromis niloticus	55.19	2.00e-138	485.00
IUUC-Oan-072879	Ornithorhynchus anatinus	82.62	0.00e+00	767.00
IUUC-Ocu-074872	Oryctolagus cuniculus	65.55	1.00e-157	549.00
IUUC-Ola-087211	Oryzias latipes	48.80	6.00e-113	400.00
IUUC-Oga-088852	Otolemur garnettii	87.36	0.00e+00	837.00
IUUC-Oar-089812	Ovis aries	96.30	0.00e+00	911.00
IUUC-Ptr-091067	Pan troglodytes	89.76	0.00e+00	860.00
IUUC-Pan-091778	Papio anubis	89.57	0.00e+00	857.00
IUUC-Psi-093932	Pelodiscus sinensis	74.89	0.00e+00	692.00
IUUC-Pfo-096845	Poecilia formosa	54.35	1.00e-135	476.00
IUUC-Pab-097892	Pongo abelii	86.75	0.00e+00	748.00
IUUC-Pca-100567	Procavia capensis	65.36	5.00e-166	577.00
IUUC-Pva-102560	Pteropus vampyrus	86.49	0.00e+00	824.00
IUUC-Rno-105662	Rattus norvegicus	82.24	0.00e+00	793.00
IUUC-Sha-107058	Sarcophilus harrisii	79.91	0.00e+00	764.00
IUUC-Sar-113643	Sorex araneus	75.79	0.00e+00	677.00
IUUC-Ssc-115791	Sus scrofa	90.85	0.00e+00	868.00
IUUC-Tgu-117145	Taeniopygia guttata	74.29	0.00e+00	683.00
IUUC-Tru-117875	Takifugu rubripes	54.17	3.00e-139	488.00
IUUC-Tsy-119030	Tarsius syrichta	87.36	0.00e+00	666.00
IUUC-Tni-119761	Tetraodon nigroviridis	53.17	1.00e-133	469.00
IUUC-Tbe-127757	Tupaia belangeri	85.82	0.00e+00	720.00
IUUC-Ttr-128762	Tursiops truncatus	93.25	0.00e+00	887.00
IUUC-Vpa-130360	Vicugna pacos	93.46	0.00e+00	889.00
IUUC-Xtr-131954	Xenopus tropicalis	64.04	8.00e-170	590.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence