iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005770

Ensembl Protein ID

fgenesh2_kg.6__486__AT5G05570.1

UniProt Accession

D7LYY6; D7LYY6_ARALL

Genbank Protein ID

EFH47429.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_487352

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__486__AT5G05570.1	fgenesh2_kg.6__486__AT5G05570.1	fgenesh2_kg.6__486__AT5G05570.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-08	35.4	252	283

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           ++++l++  +d   l++G  Dg i  WD+++g
   Q: 252  EISSLCWasTDgSVLAAGYVDGDILFWDFSDG 283
           699*****87778899999*********9887 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MFARKFLQKS SGGQNPPPPR GCLIAEDLDP HLVTHCGIPS TASLLAFDPI QCLLAVGTLD 60
GRIKVIGGDN IEAILASPKQ LPFKNLEFMQ NQGFLVSISN ENEIQVWDLD LRQPASSLKW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCGGTCATC CTCTCTGACT CTCTCAAATC GAATCTCAAG TTTTCTTCTT ATTCTACGAT 60
CAGATTCCGA CGAACAAAAT TCTCTTGCTT CCACCGATTT CTCCGTCCGA TGCATCGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome

Interpro

IPR001388--Synaptobrevin
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50892--V_SNARE
PS00678--WD_REPEATS_1

Pfam

PF00957--Synaptobrevin

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0016192--P:vesicle-mediated transport

KEGG

aly:ARALYDRAFT_487352

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000919	Aegilops tauschii	38.88	0.00e+00	681.00
IUUC-Aml-001923	Ailuropoda melanoleuca	22.55	3.00e-22	100.00
IUUC-Atr-002583	Amborella trichopoda	44.15	0.00e+00	701.00
IUUC-Apl-003619	Anas platyrhynchos	21.94	2.00e-15	77.40
IUUC-Aca-004796	Anolis carolinensis	22.69	1.00e-22	102.00
IUUC-Ath-007643	Arabidopsis thaliana	93.68	0.00e+00	2055.00
IUUC-Ago-007756	Ashbya gossypii	28.99	1.00e-07	51.60
IUUC-Acl-008044	Aspergillus clavatus	23.40	1.00e-11	65.50
IUUC-Afl-008612	Aspergillus flavus	32.09	2.00e-10	60.80
IUUC-Afu-008901	Aspergillus fumigatus	20.64	3.00e-17	83.60
IUUC-Ani-009223	Aspergillus nidulans	25.19	4.00e-11	63.50
IUUC-Ang-009861	Aspergillus niger	23.68	4.00e-19	90.10
IUUC-Aor-010078	Aspergillus oryzae	23.15	3.00e-11	63.50
IUUC-Ate-010462	Aspergillus terreus	24.13	4.00e-15	76.60
IUUC-Ame-010663	Astyanax mexicanus	21.07	2.00e-19	91.30
IUUC-Bgr-012214	Blumeria graminis	26.62	7.00e-15	75.50
IUUC-Bta-013413	Bos taurus	23.06	3.00e-23	103.00
IUUC-Bci-013698	Botrytis cinerea	23.47	3.00e-15	76.60
IUUC-Bdi-015011	Brachypodium distachyon	40.74	0.00e+00	768.00
IUUC-Bol-015788	Brassica oleracea	84.15	0.00e+00	1791.00
IUUC-Bra-017845	Brassica rapa	85.33	0.00e+00	1812.00
IUUC-Cja-018984	Callithrix jacchus	23.24	2.00e-23	103.00
IUUC-Cfa-021212	Canis familiaris	22.74	7.00e-22	99.00
IUUC-Cpo-021354	Cavia porcellus	21.48	2.00e-11	64.30
IUUC-Csa-023249	Chlorocebus sabaeus	23.06	8.00e-23	102.00
IUUC-Cho-025086	Choloepus hoffmanni	32.35	1.00e-04	42.00
IUUC-Cin-025731	Ciona intestinalis	30.89	6.00e-22	97.10
IUUC-Csv-026036	Ciona savignyi	23.91	6.00e-29	122.00
IUUC-Cgl-026432	Colletotrichum gloeosporioides	21.06	1.00e-15	78.20
IUUC-Dre-027886	Danio rerio	21.79	1.00e-20	95.10
IUUC-Dno-029242	Dasypus novemcinctus	23.34	2.00e-21	97.40
IUUC-Dor-031024	Dipodomys ordii	22.55	2.00e-22	100.00
IUUC-Dse-031263	Dothistroma septosporum	21.11	1.00e-16	81.60
IUUC-Dme-031607	Drosophila melanogaster	23.44	3.00e-20	94.40
IUUC-Ete-032893	Echinops telfairi	22.55	2.00e-22	101.00
IUUC-Eca-034305	Equus caballus	23.66	8.00e-11	62.40
IUUC-Fca-036249	Felis catus	22.55	2.00e-22	100.00
IUUC-Fal-036761	Ficedula albicollis	23.11	2.00e-23	104.00
IUUC-Gmo-038889	Gadus morhua	22.24	3.00e-19	90.50
IUUC-Ggr-039723	Gaeumannomyces graminis	22.92	7.00e-13	69.30
IUUC-Gga-040415	Gallus gallus	22.92	3.00e-23	103.00
IUUC-Gac-042416	Gasterosteus aculeatus	22.98	2.00e-18	87.80
IUUC-Gma-043996	Glycine max	46.11	0.00e+00	851.00
IUUC-Ggo-045391	Gorilla gorilla	23.06	5.00e-23	103.00
IUUC-Hsa-045903	Homo sapiens	23.06	5.00e-23	103.00
IUUC-Hvu-047650	Hordeum vulgare	40.76	3.00e-176	611.00
IUUC-Itr-048031	Ictidomys tridecemlineatus	23.80	2.00e-13	71.20
IUUC-Lch-049973	Latimeria chalumnae	24.26	6.00e-10	59.30
IUUC-Lpe-051115	Leersia perrieri	41.14	0.00e+00	653.00
IUUC-Loc-051905	Lepisosteus oculatus	21.80	2.00e-21	97.80
IUUC-Lma-053029	Leptosphaeria maculans	21.04	3.00e-12	67.40
IUUC-Laf-053723	Loxodonta africana	22.74	7.00e-22	98.60
IUUC-Mcc-055526	Macaca mulatta	23.06	5.00e-23	103.00
IUUC-Meu-056246	Macropus eugenii	27.68	3.00e-14	73.60
IUUC-Mor-057129	Magnaporthe oryzae	21.21	2.00e-13	70.90
IUUC-Mpo-057585	Magnaporthe poae	23.57	8.00e-14	72.40
IUUC-Mtr-058362	Medicago truncatula	44.67	0.00e+00	849.00
IUUC-Mga-059850	Meleagris gallopavo	22.14	2.00e-15	77.80
IUUC-Mmr-061246	Microcebus murinus	22.92	1.00e-22	101.00
IUUC-Mdo-062626	Monodelphis domestica	24.05	2.00e-22	101.00
IUUC-Mmu-063848	Mus musculus	23.38	3.00e-22	100.00
IUUC-Mac-065436	Musa acuminata	39.21	0.00e+00	718.00
IUUC-Mpu-065780	Mustela putorius furo	30.51	1.00e-17	83.60
IUUC-Mlu-067504	Myotis lucifugus	22.34	1.00e-22	101.00
IUUC-Nfi-068318	Neosartorya fischeri	21.02	2.00e-18	87.80
IUUC-Nle-069640	Nomascus leucogenys	22.71	6.00e-23	102.00
IUUC-Opr-070896	Ochotona princeps	22.65	2.00e-14	74.70
IUUC-Ont-072455	Oreochromis niloticus	22.73	3.00e-21	97.10
IUUC-Oan-073349	Ornithorhynchus anatinus	25.44	7.00e-19	86.70
IUUC-Ocu-074803	Oryctolagus cuniculus	22.89	4.00e-22	100.00
IUUC-Oba-075180	Oryza barthii	41.01	0.00e+00	672.00
IUUC-Obr-076139	Oryza brachyantha	39.79	0.00e+00	741.00
IUUC-Ogl-077142	Oryza glaberrima	41.68	0.00e+00	696.00
IUUC-Ogu-079037	Oryza glumaepatula	41.19	0.00e+00	670.00
IUUC-Oin-079192	Oryza indica	41.92	0.00e+00	701.00
IUUC-Olo-080693	Oryza longistaminata	41.50	1.00e-150	526.00
IUUC-Oni-082885	Oryza nivara	41.23	0.00e+00	676.00
IUUC-Oru-084893	Oryza rufipogon	44.08	3.00e-144	505.00
IUUC-Osa-085916	Oryza sativa	41.81	0.00e+00	696.00
IUUC-Ola-087197	Oryzias latipes	21.62	9.00e-13	68.90
IUUC-Oga-088333	Otolemur garnettii	22.92	2.00e-22	101.00
IUUC-Oar-090261	Ovis aries	23.58	4.00e-22	100.00
IUUC-Ptr-091012	Pan troglodytes	23.06	5.00e-23	103.00
IUUC-Pan-091748	Papio anubis	22.88	3.00e-22	100.00
IUUC-Psi-093405	Pelodiscus sinensis	23.11	9.00e-24	105.00
IUUC-Pno-095147	Phaeosphaeria nodorum	21.44	1.00e-08	54.70
IUUC-Pfo-096143	Poecilia formosa	22.26	4.00e-21	96.70
IUUC-Pab-098201	Pongo abelii	25.00	3.00e-18	87.40
IUUC-Pop-099413	Populus trichocarpa	50.54	0.00e+00	1006.00
IUUC-Pca-101111	Procavia capensis	24.68	4.00e-18	87.00
IUUC-Ppe-101236	Prunus persica	49.25	0.00e+00	1030.00
IUUC-Pva-102373	Pteropus vampyrus	21.86	1.00e-09	58.50
IUUC-Rno-106102	Rattus norvegicus	23.76	4.00e-22	99.80
IUUC-Sce-106140	Saccharomyces cerevisiae	23.03	2.00e-06	47.80
IUUC-Sha-106592	Sarcophilus harrisii	22.09	2.00e-13	70.90
IUUC-Sit-110386	Setaria italica	41.85	0.00e+00	758.00
IUUC-Sly-111338	Solanum lycopersicum	54.13	2.00e-100	358.00
IUUC-Stu-112417	Solanum tuberosum	55.29	3.00e-99	354.00
IUUC-Sar-113007	Sorex araneus	30.51	2.00e-17	84.30
IUUC-Sbi-114175	Sorghum bicolor	41.46	0.00e+00	748.00
IUUC-Ssc-115307	Sus scrofa	23.06	1.00e-22	102.00
IUUC-Tgu-116507	Taeniopygia guttata	23.11	2.00e-23	104.00
IUUC-Tru-118317	Takifugu rubripes	21.63	2.00e-14	74.30
IUUC-Tca-121612	Theobroma cacao	52.26	0.00e+00	1072.00
IUUC-Tae-125452	Triticum aestivum	40.56	0.00e+00	773.00
IUUC-Tur-126560	Triticum urartu	40.11	0.00e+00	706.00
IUUC-Tbe-127510	Tupaia belangeri	22.22	3.00e-18	87.00
IUUC-Ttr-129239	Tursiops truncatus	22.00	2.00e-21	97.80
IUUC-Vda-129843	Verticillium dahliae	22.98	4.00e-20	93.20
IUUC-Vpa-130524	Vicugna pacos	29.94	9.00e-17	82.40
IUUC-Vvi-131567	Vitis vinifera	49.60	0.00e+00	1015.00
IUUC-Xtr-132060	Xenopus tropicalis	23.44	1.00e-16	81.60
IUUC-Xma-133008	Xiphophorus maculatus	22.64	9.00e-21	95.50
IUUC-Yli-134491	Yarrowia lipolytica	21.75	1.00e-16	81.60
IUUC-Zma-135923	Zea mays	39.20	2.00e-161	563.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence