iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021796

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ribosome biogenesis protein BOP1; Block of proliferation 1 protein

Genbank Nucleotide ID

AAKN02050292

Gene Name

BOP1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000005456.3	ENSCPOT00000005514.2	ENSCPOP00000004912.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-21	75.2	372	411

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+d v+cl+  ++   lvsGsdDg++++W++ t ++ k+
   Q: 372  GHSDLVRCLSVsPGgQWLVSGSDDGSVRLWEVATARCMKT 411
           8**********988899*******************9875 PP

Organism

Cavia porcellus

Functional Description
(View)

Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

QPFLLCDPAS RHGDSNDSSL SDSEESVFSG LEDSGSDSSE DNNNEGEDEI SCDKGHSRTE 60
GQAQTGSPGL RTEMAKASSQ DEYQEDSSDE EDIRNTVGNV PLEWYDDFPH VGYDLDGRRI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCCCTTTC TTCTCTGTGA CCCTGCTTCC AGGCATGGTG ACAGCAATGA TTCCAGCCTC 60
TCGGACAGTG AGGAAAGTGT ATTCTCAGGC TTGGAAGATT CTGGCAGTGA TAGTAGTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0003723--F:RNA binding
GO:0008283--P:cell proliferation
GO:0000448--P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051726--P:regulation of cell cycle

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	41.09	2.00e-122	433.00
IUUC-Aml-001507	Ailuropoda melanoleuca	81.65	0.00e+00	1047.00
IUUC-Atr-003141	Amborella trichopoda	41.51	2.00e-86	313.00
IUUC-Apl-003545	Anas platyrhynchos	67.53	0.00e+00	805.00
IUUC-Aly-005649	Arabidopsis lyrata	44.88	2.00e-156	546.00
IUUC-Ath-007625	Arabidopsis thaliana	45.29	4.00e-155	541.00
IUUC-Ago-007958	Ashbya gossypii	43.35	3.00e-162	565.00
IUUC-Acl-008344	Aspergillus clavatus	43.25	7.00e-142	498.00
IUUC-Afl-008616	Aspergillus flavus	41.64	3.00e-146	512.00
IUUC-Afu-009083	Aspergillus fumigatus	44.05	2.00e-140	493.00
IUUC-Ani-009365	Aspergillus nidulans	43.43	5.00e-146	511.00
IUUC-Ang-009796	Aspergillus niger	42.24	6.00e-141	494.00
IUUC-Aor-010015	Aspergillus oryzae	41.64	3.00e-146	512.00
IUUC-Ate-010537	Aspergillus terreus	42.18	4.00e-148	518.00
IUUC-Ame-011767	Astyanax mexicanus	68.80	3.00e-113	400.00
IUUC-Bgr-012286	Blumeria graminis	41.62	3.00e-149	522.00
IUUC-Bta-013569	Bos taurus	85.26	0.00e+00	1104.00
IUUC-Bci-013820	Botrytis cinerea	42.39	5.00e-144	504.00
IUUC-Bdi-014895	Brachypodium distachyon	46.10	1.00e-154	540.00
IUUC-Bol-016099	Brassica oleracea	45.06	9.00e-157	547.00
IUUC-Bra-017174	Brassica rapa	44.73	1.00e-156	547.00
IUUC-Cel-018201	Caenorhabditis elegans	47.99	2.00e-158	552.00
IUUC-Cja-019009	Callithrix jacchus	76.19	0.00e+00	951.00
IUUC-Cfa-020173	Canis familiaris	82.64	0.00e+00	1037.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	47.41	7.00e-154	537.00
IUUC-Csa-023440	Chlorocebus sabaeus	89.98	0.00e+00	1162.00
IUUC-Cin-025782	Ciona intestinalis	54.14	0.00e+00	738.00
IUUC-Csv-026352	Ciona savignyi	54.97	0.00e+00	738.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	38.47	2.00e-114	406.00
IUUC-Cne-027004	Cryptococcus neoformans	43.57	2.00e-171	596.00
IUUC-Cme-027242	Cyanidioschyzon merolae	39.62	2.00e-124	439.00
IUUC-Dre-028658	Danio rerio	74.18	0.00e+00	1013.00
IUUC-Dno-028883	Dasypus novemcinctus	82.90	0.00e+00	1077.00
IUUC-Dor-031031	Dipodomys ordii	87.16	0.00e+00	1151.00
IUUC-Dse-031443	Dothistroma septosporum	40.57	2.00e-143	502.00
IUUC-Dme-031786	Drosophila melanogaster	53.78	0.00e+00	750.00
IUUC-Eca-033677	Equus caballus	86.72	0.00e+00	1127.00
IUUC-Eeu-035310	Erinaceus europaeus	86.36	0.00e+00	925.00
IUUC-Fca-035888	Felis catus	86.05	0.00e+00	1101.00
IUUC-Fal-037438	Ficedula albicollis	69.38	0.00e+00	747.00
IUUC-Fox-037973	Fusarium oxysporum	43.57	2.00e-158	552.00
IUUC-Fso-038187	Fusarium solani	42.95	8.00e-157	547.00
IUUC-Gmo-039114	Gadus morhua	65.70	0.00e+00	840.00
IUUC-Ggr-039746	Gaeumannomyces graminis	40.49	2.00e-153	536.00
IUUC-Gga-040631	Gallus gallus	74.63	6.00e-159	553.00
IUUC-Gac-042582	Gasterosteus aculeatus	65.06	0.00e+00	898.00
IUUC-Gma-044215	Glycine max	43.77	1.00e-151	530.00
IUUC-Ggo-045587	Gorilla gorilla	91.57	0.00e+00	1150.00
IUUC-Hsa-046319	Homo sapiens	90.29	0.00e+00	1164.00
IUUC-Hvu-047526	Hordeum vulgare	44.86	3.00e-145	509.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	87.25	0.00e+00	1139.00
IUUC-Kpa-049221	Komagataella pastoris	42.45	2.00e-155	543.00
IUUC-Lch-049640	Latimeria chalumnae	73.74	0.00e+00	1020.00
IUUC-Lpe-051135	Leersia perrieri	42.95	4.00e-135	474.00
IUUC-Loc-051930	Lepisosteus oculatus	74.03	0.00e+00	988.00
IUUC-Lma-053290	Leptosphaeria maculans	42.64	9.00e-143	500.00
IUUC-Laf-053903	Loxodonta africana	78.84	0.00e+00	987.00
IUUC-Mcc-055471	Macaca mulatta	88.92	0.00e+00	1162.00
IUUC-Meu-056190	Macropus eugenii	84.42	0.00e+00	1062.00
IUUC-Mor-057135	Magnaporthe oryzae	40.20	9.00e-145	507.00
IUUC-Mpo-057475	Magnaporthe poae	39.77	1.00e-142	500.00
IUUC-Mtr-058689	Medicago truncatula	41.55	3.00e-132	466.00
IUUC-Mla-059149	Melampsora laricipopulina	45.81	2.00e-170	592.00
IUUC-Mga-059645	Meleagris gallopavo	65.57	7.00e-101	359.00
IUUC-Mvi-060485	Microbotryum violaceum	44.41	4.00e-149	523.00
IUUC-Mmr-061674	Microcebus murinus	89.30	0.00e+00	1098.00
IUUC-Mdo-062973	Monodelphis domestica	80.12	0.00e+00	1081.00
IUUC-Mmu-064180	Mus musculus	87.30	0.00e+00	1152.00
IUUC-Mac-064535	Musa acuminata	40.96	1.00e-94	341.00
IUUC-Mpu-066406	Mustela putorius furo	86.71	0.00e+00	1133.00
IUUC-Mlu-067795	Myotis lucifugus	88.37	0.00e+00	1095.00
IUUC-Nfi-068516	Neosartorya fischeri	42.31	3.00e-134	472.00
IUUC-Ncr-068767	Neurospora crassa	42.90	3.00e-138	485.00
IUUC-Opr-071084	Ochotona princeps	85.36	2.00e-143	501.00
IUUC-Ont-071614	Oreochromis niloticus	69.31	0.00e+00	924.00
IUUC-Oba-075980	Oryza barthii	43.16	7.00e-136	477.00
IUUC-Obr-076799	Oryza brachyantha	45.37	2.00e-148	519.00
IUUC-Ogl-077134	Oryza glaberrima	44.82	1.00e-142	499.00
IUUC-Ogu-078655	Oryza glumaepatula	43.20	1.00e-137	483.00
IUUC-Oin-079654	Oryza indica	44.82	3.00e-142	498.00
IUUC-Olo-080706	Oryza longistaminata	43.32	3.00e-136	478.00
IUUC-Ome-081716	Oryza meridionalis	41.11	5.00e-125	441.00
IUUC-Oni-082508	Oryza nivara	43.46	3.00e-135	475.00
IUUC-Opu-083707	Oryza punctata	43.16	6.00e-135	474.00
IUUC-Oru-084453	Oryza rufipogon	43.32	3.00e-136	478.00
IUUC-Osa-085811	Oryza sativa	44.82	2.00e-142	499.00
IUUC-Ola-087361	Oryzias latipes	70.31	0.00e+00	947.00
IUUC-Oga-088015	Otolemur garnettii	87.48	0.00e+00	1145.00
IUUC-Oar-090058	Ovis aries	65.76	6.00e-128	451.00
IUUC-Ptr-090631	Pan troglodytes	84.31	2.00e-143	501.00
IUUC-Pan-092306	Papio anubis	89.09	0.00e+00	1160.00
IUUC-Pma-094622	Petromyzon marinus	71.80	0.00e+00	966.00
IUUC-Pno-094794	Phaeosphaeria nodorum	39.22	4.00e-130	458.00
IUUC-Ppa-095528	Physcomitrella patens	41.42	3.00e-96	345.00
IUUC-Pfo-096682	Poecilia formosa	69.40	0.00e+00	946.00
IUUC-Pab-097939	Pongo abelii	90.05	0.00e+00	1025.00
IUUC-Pop-099530	Populus trichocarpa	46.58	6.00e-141	494.00
IUUC-Pca-100333	Procavia capensis	85.69	0.00e+00	1113.00
IUUC-Ppe-102078	Prunus persica	44.41	5.00e-150	525.00
IUUC-Pgr-103525	Puccinia graminis	46.12	1.00e-165	577.00
IUUC-Ptt-103929	Puccinia triticina	45.58	8.00e-161	561.00
IUUC-Pte-104029	Pyrenophora teres	42.33	9.00e-152	530.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	42.48	7.00e-152	531.00
IUUC-Rno-105248	Rattus norvegicus	88.18	0.00e+00	1132.00
IUUC-Sce-106381	Saccharomyces cerevisiae	41.47	1.00e-156	546.00
IUUC-Sha-106519	Sarcophilus harrisii	83.33	0.00e+00	1086.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	41.61	1.00e-139	489.00
IUUC-Spo-108071	Schizosaccharomyces pombe	41.67	2.00e-140	493.00
IUUC-Smo-109604	Selaginella moellendorffii	47.24	1.00e-157	550.00
IUUC-Sit-109742	Setaria italica	43.64	7.00e-151	527.00
IUUC-Sly-110970	Solanum lycopersicum	46.36	4.00e-80	291.00
IUUC-Stu-112593	Solanum tuberosum	45.87	3.00e-154	539.00
IUUC-Sar-113123	Sorex araneus	83.49	1.00e-144	505.00
IUUC-Sbi-113945	Sorghum bicolor	44.43	2.00e-150	525.00
IUUC-Sre-115188	Sporisorium reilianum	46.15	1.00e-163	570.00
IUUC-Ssc-115352	Sus scrofa	89.14	0.00e+00	1079.00
IUUC-Tru-117685	Takifugu rubripes	69.76	0.00e+00	940.00
IUUC-Tni-119982	Tetraodon nigroviridis	69.77	0.00e+00	895.00
IUUC-Tca-121664	Theobroma cacao	46.02	1.00e-159	556.00
IUUC-Tre-122229	Trichoderma reesei	43.90	9.00e-139	487.00
IUUC-Tvi-122576	Trichoderma virens	43.22	9.00e-143	500.00
IUUC-Tae-124110	Triticum aestivum	44.44	2.00e-135	476.00
IUUC-Tur-126781	Triticum urartu	41.72	5.00e-119	421.00
IUUC-Tme-127080	Tuber melanosporum	46.30	2.00e-171	595.00
IUUC-Ttr-128514	Tursiops truncatus	84.84	0.00e+00	789.00
IUUC-Uma-129556	Ustilago maydis	44.36	5.00e-156	545.00
IUUC-Vda-129715	Verticillium dahliae	43.50	5.00e-151	528.00
IUUC-Vvi-131211	Vitis vinifera	43.07	9.00e-149	520.00
IUUC-Xma-133883	Xiphophorus maculatus	69.48	0.00e+00	912.00
IUUC-Yli-134438	Yarrowia lipolytica	43.09	5.00e-143	501.00
IUUC-Zma-135341	Zea mays	40.15	1.00e-135	476.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence