iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018414

Ensembl Protein ID

Y41E3.9a

UniProt Accession

Q9U2H4; Q9U2H4_CAEEL

Genbank Protein ID

CAB63365.3

Protein Name

FANCD2 (Fanconi's anemia defect) ortholog

Genbank Nucleotide ID

BX284604

Gene Name

fcd-2; CELE_Y41E3.9; Y41E3.9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00012767	Y41E3.9a	Y41E3.9a

Annotation

mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	23.79	3.00e-04	46.60	IUUC-Hsa-046759

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSDEEFDILD DENSHVAASQ HVEDDDPDDR HNSGNRRNFS MAMTQKLFGN LDGAGAENHV 60
SYAENAYVTP RNRFEEILKE ENVRIVNDQD EGMMDMEMGS YEKCVVFGNN LNSEDLCRNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGATTTAAA TATGTCAGAT GAAGAATTCG ACATTCTAGA TGATGAAAAT AGTCATGTGG 60
CTGCATCCCA ACACGTGGAA GATGGTAAAA ACTCAAATTT TCTTTATTTT TTCCCGTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR029448--FANCD2

Pfam

PF14631--FancD2

Gene Ontology

GO:0000793--C:condensed chromosome
GO:0005634--C:nucleus
GO:0070182--F:DNA polymerase binding
GO:0006281--P:DNA repair
GO:0006289--P:nucleotide-excision repair
GO:0090329--P:regulation of DNA-dependent DNA replication

KEGG

cel:CELE_Y41E3.9

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001335	Ailuropoda melanoleuca	24.64	7.00e-08	52.40
IUUC-Apl-004194	Anas platyrhynchos	24.56	2.00e-10	60.50
IUUC-Aca-004342	Anolis carolinensis	23.38	4.00e-09	56.60
IUUC-Ath-007464	Arabidopsis thaliana	19.66	8.00e-04	38.90
IUUC-Ame-011928	Astyanax mexicanus	21.55	2.00e-06	46.60
IUUC-Bta-012694	Bos taurus	25.25	6.00e-08	52.80
IUUC-Cja-018718	Callithrix jacchus	24.26	3.00e-06	47.00
IUUC-Cfa-020099	Canis familiaris	22.96	6.00e-05	42.70
IUUC-Cpo-022409	Cavia porcellus	24.25	1.00e-07	52.00
IUUC-Cre-022630	Chlamydomonas reinhardtii	38.46	1.40e+00	26.90
IUUC-Csa-023529	Chlorocebus sabaeus	23.27	2.00e-06	47.40
IUUC-Cin-025320	Ciona intestinalis	14.97	9.00e-03	35.40
IUUC-Cme-027121	Cyanidioschyzon merolae	29.11	6.00e-04	39.30
IUUC-Dre-027518	Danio rerio	23.27	1.00e-05	45.10
IUUC-Dno-029719	Dasypus novemcinctus	25.37	5.00e-08	52.80
IUUC-Dme-032205	Drosophila melanogaster	27.96	1.00e-04	41.60
IUUC-Eca-033657	Equus caballus	24.76	8.00e-08	52.40
IUUC-Eeu-035133	Erinaceus europaeus	27.85	1.80e-02	34.70
IUUC-Fca-035880	Felis catus	24.26	2.00e-07	51.20
IUUC-Fal-037013	Ficedula albicollis	20.68	1.00e-06	48.10
IUUC-Gmo-039371	Gadus morhua	22.01	4.00e-04	39.70
IUUC-Gga-040720	Gallus gallus	25.00	1.00e-11	65.10
IUUC-Gac-042331	Gasterosteus aculeatus	22.92	5.00e-09	56.20
IUUC-Ggo-045657	Gorilla gorilla	24.05	3.00e-03	37.00
IUUC-Hsa-046759	Homo sapiens	23.79	3.00e-06	47.00
IUUC-Itr-048885	Ictidomys tridecemlineatus	24.27	1.00e-07	52.00
IUUC-Lch-049711	Latimeria chalumnae	22.22	1.00e-05	45.10
IUUC-Loc-051888	Lepisosteus oculatus	22.11	3.00e-07	50.40
IUUC-Laf-053492	Loxodonta africana	24.15	3.00e-08	53.50
IUUC-Mcc-055632	Macaca mulatta	23.79	5.00e-06	46.20
IUUC-Mla-059003	Melampsora laricipopulina	34.88	4.30e-01	28.50
IUUC-Mga-059769	Meleagris gallopavo	24.28	3.00e-09	57.00
IUUC-Mmr-061234	Microcebus murinus	24.27	1.00e-07	51.20
IUUC-Mdo-062903	Monodelphis domestica	21.05	6.30e-02	32.70
IUUC-Mmu-063676	Mus musculus	23.84	1.00e-03	38.50
IUUC-Mpu-066421	Mustela putorius furo	24.64	4.00e-08	53.10
IUUC-Mlu-067851	Myotis lucifugus	24.76	5.00e-07	49.70
IUUC-Nle-069694	Nomascus leucogenys	23.79	6.00e-07	48.10
IUUC-Opr-071174	Ochotona princeps	26.24	1.00e-09	58.20
IUUC-Ont-071414	Oreochromis niloticus	22.40	2.00e-08	54.70
IUUC-Ocu-073877	Oryctolagus cuniculus	25.50	4.00e-08	53.10
IUUC-Ola-086402	Oryzias latipes	22.54	5.00e-06	46.20
IUUC-Oga-088325	Otolemur garnettii	23.23	2.00e-05	44.30
IUUC-Oar-089492	Ovis aries	26.24	7.00e-09	55.80
IUUC-Ptr-091257	Pan troglodytes	23.79	2.00e-06	47.40
IUUC-Pan-091710	Papio anubis	23.79	5.00e-07	47.80
IUUC-Psi-093960	Pelodiscus sinensis	22.78	7.00e-10	58.90
IUUC-Pma-094600	Petromyzon marinus	24.16	5.00e-10	59.30
IUUC-Ppa-095666	Physcomitrella patens	22.26	3.20e-01	30.40
IUUC-Pfo-096345	Poecilia formosa	20.83	3.00e-08	53.50
IUUC-Pab-098684	Pongo abelii	23.79	3.00e-06	47.00
IUUC-Pva-102653	Pteropus vampyrus	24.75	1.00e-07	52.00
IUUC-Rno-105830	Rattus norvegicus	25.00	2.00e-04	40.80
IUUC-Sha-106852	Sarcophilus harrisii	23.68	3.00e-03	37.40
IUUC-Ssc-116311	Sus scrofa	24.49	7.00e-06	45.80
IUUC-Tgu-116706	Taeniopygia guttata	23.81	1.00e-08	55.10
IUUC-Tru-118512	Takifugu rubripes	21.10	2.00e-07	50.80
IUUC-Tni-120565	Tetraodon nigroviridis	22.40	6.00e-09	55.80
IUUC-Tbe-127657	Tupaia belangeri	25.25	7.00e-08	52.40
IUUC-Ttr-128431	Tursiops truncatus	24.75	1.00e-06	48.10
IUUC-Xtr-132684	Xenopus tropicalis	24.82	4.00e-08	53.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence