iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108922

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377573

Gene Name

SELMODRAFT_86492

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_86492	EFJ31840	EFJ31840

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-28	96.2	281	310
E3 adaptor/Cullin RING/APC_C/CDC20	8.40e-130	433.2	145	451

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H+ +v++l++ ++   l+sG++D+ ++vWD
   Q: 281  HQQEVCGLKWsPSgQQLASGGNDNLLHVWD 310
           99*********66699************** PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsarvg 100
           pe+ ldape+ dd+ylnLldW+s+nv+avaLg++vylw+a+tg++++l++  ee+  vtsv+w ++g++++vG +++ v+++D  + ++vr+l+ hsarvg
   Q: 145  PERTLDAPEILDDYYLNLLDWGSNNVVAVALGHTVYLWNASTGNIEELMQAnEEDGPVTSVAWAPDGKHISVGLSNADVQLWDSLSLRQVRSLKAHSARVG 245
           6799**********************************************9566668******************************************** PP
   S: 101  aLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse......PlkkfkehkaavkaiawsPwqkslL 195
           +L+Wn  +ls+G+rd+ i  +dvr++e+ + ++ ah+qevCGlkw+ ++++LasGGnDn ++vwda+          l++ +eh+aavka+aw+P+q++lL
   Q: 246  SLAWNGPILSTGGRDNVIFNHDVRIREHVTGKMVAHQQEVCGLKWSPSGQQLASGGNDNLLHVWDAAAAVsggtssYLHRLDEHQAAVKALAWCPFQSNLL 346
           *****************************************************************98765566666899999******************* PP
   S: 196  asGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwkl 296
           asGGGtaDrcikfwnt tga+++++dtgsqvc l wsk+++el+s+hGf++n+++lwkyps+ k+ael+gh++Rvl+la spdg ++++aagDetlrfw++
   Q: 347  ASGGGTADRCIKFWNTHTGACIQSVDTGSQVCALQWSKHERELLSSHGFSQNQLILWKYPSMVKMAELTGHTSRVLHLAQSPDGYTVASAAGDETLRFWQV 447
           ***************************************************************************************************** PP
   S: 297  fdkk 300
           f + 
   Q: 448  FGNP 451
           *765 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAAQGTATCS TPGRAPCLIS NPPRKTPGKL QLQSDRFIPD RSAMNFDVAN MLVLGKENSH 60
SQQQQQQQQH LRYDCCQEEY KKQLAENLLK DANILHKESR ILAFKNRPPP PPEGFDKESR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGCCC AGGGCACGGC GACTTGCTCT ACTCCCGGCA GAGCCCCGTG CCTCATCTCG 60
AATCCGCCGA GGAAGACGCC GGGGAAGCTC CAGCTCCAGA GCGATCGATT CATCCCAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

smo:SELMODRAFT_86492

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000638	Aegilops tauschii	60.51	6.00e-153	533.00
IUUC-Aml-001545	Ailuropoda melanoleuca	50.23	1.00e-117	415.00
IUUC-Atr-003103	Amborella trichopoda	59.19	8.00e-150	522.00
IUUC-Apl-003255	Anas platyrhynchos	47.85	2.00e-118	418.00
IUUC-Aca-004920	Anolis carolinensis	46.51	8.00e-109	386.00
IUUC-Aly-006253	Arabidopsis lyrata	60.88	1.00e-155	541.00
IUUC-Ath-006795	Arabidopsis thaliana	60.81	5.00e-157	546.00
IUUC-Bta-012625	Bos taurus	50.00	8.00e-118	416.00
IUUC-Bdi-014063	Brachypodium distachyon	59.01	1.00e-153	535.00
IUUC-Bol-015368	Brassica oleracea	61.88	2.00e-156	546.00
IUUC-Bra-016738	Brassica rapa	61.17	4.00e-157	547.00
IUUC-Cja-019132	Callithrix jacchus	51.14	9.00e-120	422.00
IUUC-Cfa-020780	Canis familiaris	49.54	4.00e-117	414.00
IUUC-Cpo-022223	Cavia porcellus	49.54	2.00e-107	382.00
IUUC-Cre-022701	Chlamydomonas reinhardtii	54.02	1.00e-131	462.00
IUUC-Csa-023666	Chlorocebus sabaeus	50.68	2.00e-118	418.00
IUUC-Cho-024920	Choloepus hoffmanni	44.49	9.00e-50	190.00
IUUC-Cin-025675	Ciona intestinalis	50.00	1.00e-112	399.00
IUUC-Csv-026019	Ciona savignyi	47.61	2.00e-104	372.00
IUUC-Cme-027234	Cyanidioschyzon merolae	54.61	5.00e-118	417.00
IUUC-Dre-028026	Danio rerio	42.73	6.00e-104	370.00
IUUC-Dno-028865	Dasypus novemcinctus	50.11	8.00e-117	413.00
IUUC-Dor-030958	Dipodomys ordii	48.91	2.00e-113	402.00
IUUC-Dse-031391	Dothistroma septosporum	48.43	2.00e-98	352.00
IUUC-Dme-031905	Drosophila melanogaster	47.19	1.00e-119	422.00
IUUC-Ete-032387	Echinops telfairi	46.35	2.00e-107	382.00
IUUC-Eca-033522	Equus caballus	44.59	4.00e-100	357.00
IUUC-Eeu-035059	Erinaceus europaeus	44.93	1.00e-95	342.00
IUUC-Fca-036346	Felis catus	48.28	9.00e-104	369.00
IUUC-Fal-037558	Ficedula albicollis	48.14	3.00e-116	411.00
IUUC-Gga-040790	Gallus gallus	48.40	5.00e-119	420.00
IUUC-Gac-041431	Gasterosteus aculeatus	43.27	2.00e-101	361.00
IUUC-Gma-043985	Glycine max	60.59	3.00e-144	504.00
IUUC-Ggo-045052	Gorilla gorilla	50.46	2.00e-118	418.00
IUUC-Hsa-046305	Homo sapiens	50.46	2.00e-118	418.00
IUUC-Hvu-047227	Hordeum vulgare	58.57	6.00e-152	529.00
IUUC-Itr-048461	Ictidomys tridecemlineatus	50.23	7.00e-109	386.00
IUUC-Lpe-050954	Leersia perrieri	60.64	2.00e-143	501.00
IUUC-Loc-052638	Lepisosteus oculatus	43.26	7.00e-100	356.00
IUUC-Lma-052998	Leptosphaeria maculans	45.43	2.00e-98	352.00
IUUC-Laf-053742	Loxodonta africana	50.23	1.00e-117	416.00
IUUC-Mcc-054948	Macaca mulatta	50.68	2.00e-118	418.00
IUUC-Mtr-057725	Medicago truncatula	58.19	9.00e-144	502.00
IUUC-Mga-060102	Meleagris gallopavo	48.17	2.00e-118	418.00
IUUC-Mmr-061615	Microcebus murinus	50.68	2.00e-118	418.00
IUUC-Mdo-061982	Monodelphis domestica	47.26	2.00e-96	347.00
IUUC-Mmu-063864	Mus musculus	49.03	3.00e-114	404.00
IUUC-Mac-064861	Musa acuminata	61.71	1.00e-159	555.00
IUUC-Mpu-066502	Mustela putorius furo	50.48	2.00e-118	418.00
IUUC-Mlu-067277	Myotis lucifugus	48.58	7.00e-116	410.00
IUUC-Nle-070149	Nomascus leucogenys	50.46	1.00e-116	412.00
IUUC-Ont-071660	Oreochromis niloticus	44.62	2.00e-102	365.00
IUUC-Oan-073677	Ornithorhynchus anatinus	52.39	3.00e-109	388.00
IUUC-Ocu-073797	Oryctolagus cuniculus	50.23	7.00e-118	417.00
IUUC-Oba-075946	Oryza barthii	59.91	5.00e-153	533.00
IUUC-Obr-076018	Oryza brachyantha	59.69	1.00e-154	538.00
IUUC-Ogl-077254	Oryza glaberrima	59.23	2.00e-143	501.00
IUUC-Ogu-078521	Oryza glumaepatula	59.91	4.00e-153	534.00
IUUC-Oin-079145	Oryza indica	59.91	2.00e-153	534.00
IUUC-Olo-080449	Oryza longistaminata	59.46	1.00e-145	508.00
IUUC-Ome-081186	Oryza meridionalis	61.20	7.00e-153	533.00
IUUC-Oni-082243	Oryza nivara	59.23	2.00e-143	501.00
IUUC-Opu-084007	Oryza punctata	59.01	9.00e-143	499.00
IUUC-Oru-084562	Oryza rufipogon	59.91	5.00e-153	534.00
IUUC-Osa-086094	Oryza sativa	59.23	2.00e-143	501.00
IUUC-Ola-086907	Oryzias latipes	47.12	5.00e-104	370.00
IUUC-Olu-087647	Ostreococcus lucimarinus	61.31	4.00e-152	530.00
IUUC-Oga-088184	Otolemur garnettii	49.89	9.00e-115	406.00
IUUC-Oar-090023	Ovis aries	50.84	6.00e-113	400.00
IUUC-Ptr-090935	Pan troglodytes	50.00	7.00e-117	413.00
IUUC-Pan-091845	Papio anubis	50.68	2.00e-118	418.00
IUUC-Psi-093188	Pelodiscus sinensis	48.43	4.00e-120	424.00
IUUC-Pma-094187	Petromyzon marinus	44.81	2.00e-103	368.00
IUUC-Pno-094809	Phaeosphaeria nodorum	46.93	1.00e-97	349.00
IUUC-Ppa-095457	Physcomitrella patens	70.67	2.00e-174	604.00
IUUC-Pab-098603	Pongo abelii	50.68	1.00e-118	419.00
IUUC-Pop-098890	Populus trichocarpa	60.09	2.00e-149	521.00
IUUC-Pca-101062	Procavia capensis	50.23	4.00e-116	410.00
IUUC-Ppe-101865	Prunus persica	61.00	5.00e-144	503.00
IUUC-Pva-102925	Pteropus vampyrus	49.25	2.00e-119	421.00
IUUC-Pte-104142	Pyrenophora teres	46.40	5.00e-98	351.00
IUUC-Pyt-104693	Pyrenophora triticirepentis	46.40	5.00e-98	350.00
IUUC-Rno-106005	Rattus norvegicus	48.60	5.00e-114	404.00
IUUC-Sha-107472	Sarcophilus harrisii	49.03	2.00e-115	408.00
IUUC-Sja-107919	Schizosaccharomyces japonicus	46.07	2.00e-95	342.00
IUUC-Spo-108075	Schizosaccharomyces pombe	43.78	2.00e-91	328.00
IUUC-Sit-110732	Setaria italica	62.41	4.00e-152	530.00
IUUC-Sly-111202	Solanum lycopersicum	63.31	4.00e-152	530.00
IUUC-Stu-112024	Solanum tuberosum	61.17	1.00e-153	535.00
IUUC-Sar-113092	Sorex araneus	46.88	1.00e-106	379.00
IUUC-Sbi-114558	Sorghum bicolor	61.56	7.00e-153	532.00
IUUC-Ssc-115710	Sus scrofa	50.23	2.00e-117	415.00
IUUC-Tgu-117100	Taeniopygia guttata	49.28	2.00e-116	412.00
IUUC-Tni-120474	Tetraodon nigroviridis	45.88	1.00e-100	359.00
IUUC-Tca-120949	Theobroma cacao	62.79	3.00e-156	544.00
IUUC-Tae-124932	Triticum aestivum	58.94	2.00e-154	537.00
IUUC-Tur-126193	Triticum urartu	60.51	1.00e-152	532.00
IUUC-Tme-126905	Tuber melanosporum	48.55	1.00e-100	359.00
IUUC-Tbe-127384	Tupaia belangeri	53.67	3.00e-96	344.00
IUUC-Ttr-128511	Tursiops truncatus	49.77	3.00e-116	411.00
IUUC-Vvi-131245	Vitis vinifera	64.05	4.00e-145	506.00
IUUC-Xtr-131993	Xenopus tropicalis	50.00	1.00e-117	416.00
IUUC-Xma-133332	Xiphophorus maculatus	44.34	4.00e-103	367.00
IUUC-Zma-135135	Zea mays	60.00	4.00e-154	536.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence