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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Sce-106443
UUCD1 version UUC-SaC-00186
Ensembl Protein ID YMR093W
UniProt Accession Q04305; D6VZR6; UTP15_YEAST
Genbank Protein ID CAA89240.1; DAA09990.1
Protein Name U3 small nucleolar RNA-associated protein 15; U three protein 15; U3 protein 15 required for transcription; t-UTP15
Genbank Nucleotide ID Z49259; BK006946
Gene Name UTP15; YMR093W; YM9582.18
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YMR093W YMR093W YMR093W
Annotation
mRNA Expression
GEOFFGED
Protein-protein Interaction
IIDiRefIndexHINTMentha
Post-translational Modifications (PTMs)
CPLMdbPAFdbPTMBioGRID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.00e-21 71.8 168 201
UBD/Beta-Prp 1.10e-49 167.6 36 260
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf....sdtllvsGsdDgtikvWDlrtg 33
    td v+ l+f + +l+++Gs+Dg i+++D+r+
   Q: 168 TDYVRTLSFipaaP-HLVATGSYDGLIRLYDTRSS 201
    799*******7655.78899***********9876 PP
   


   UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw.dlstgkcvhtlkghedsvlslsfsps 105
    ++h sv + + f p+ ++ ++ + ++++++ +t ++++++s ++ v++ +f +dgk+l g +++ v+ +++ ++++ ++++ ++ ++f+ +
   Q: 36 VKEHNSVTH-ISFNPQHPHDFAVTSSTRVQIFSSRTRQVIKTFSRFKDVVYSASFRSDGKLLCAGDATGLVSVYdSYNPRTILLSINASTHPTHVTKFHTQ 135
    455555555.99966666544444499***********************************************767788899999999999999999995 PP
   S: 106 g.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls.fdsngkelvsgsldgt 203
    + + l+++s+dr+ r+wd+++ ++ + l+g ++ v+++++ p + l+++Gs+D+ +rl+d ++ + +h+++v+ ++ +++ +++vs++ ++
   Q: 136 DnKILATASDDRVTRLWDISNAYEPQLELTGATDYVRTLSFIPAApHLVATGSYDGLIRLYDTRSSGSTPIYSLNHDQPVENVIaVSP--TQIVSCGGNNF 234
    54999********************999***********************************999888888889*****99985777..78*****9875 PP
   S: 204 vklwdlqtgecvrtlnghtdnvksvrf 230
    k+wdl +++ +++ + ++ v++++
   Q: 235 -KVWDLTSNKKLYERGNFNKAVTCLDY 260
    .********999999999999988865 PP
   

Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description



     Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs).
Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs).
Protein Sequence
(Fasta)
MSTARPRIIT SKAPLLPQQT TPEQRYWRQY TSAQLVKEHN SVTHISFNPQ HPHDFAVTSS 60
TRVQIFSSRT RQVIKTFSRF KDVVYSASFR SDGKLLCAGD ATGLVSVYDS YNPRTILLSI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Sce-106443|E3,WD_repeat;UBD,Beta-Prp|Saccharomyces cerevisiae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCGACTG CTAGGCCTAG AATAATCACT TCGAAGGCTC CATTATTGCC TCAACAGACT 60
ACCCCGGAGC AGCGTTACTG GCGTCAATAC ACTTCCGCAC AACTGGTTAA AGAACATAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sce-106443|E3,WD_repeat;UBD,Beta-Prp|Saccharomyces cerevisiae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0687--Ribonucleoprotein
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0804--Transcription
KW-0853--WD repeat

Interpro

IPR018983--U3_snoRNA-assocProt_15_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09384--UTP15_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0033553--C:rDNA heterochromatin
GO:0032040--C:small-subunit processome
GO:0034455--C:t-UTP complex
GO:0030515--F:snoRNA binding
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0045943--P:positive regulation of transcription from RNA polymerase I promoter
GO:0031167--P:rRNA methylation
GO:0006351--P:transcription, DNA-templated

KEGG sce:YMR093W
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002117 Ailuropoda melanoleuca 30.06 2.00e-64 238.00
IUUC-Atr-003068 Amborella trichopoda 30.49 8.00e-43 166.00
IUUC-Apl-003926 Anas platyrhynchos 30.35 3.00e-55 207.00
IUUC-Aca-004271 Anolis carolinensis 30.56 5.00e-60 223.00
IUUC-Aly-005525 Arabidopsis lyrata 28.49 2.00e-40 157.00
IUUC-Ath-006954 Arabidopsis thaliana 27.59 5.00e-38 150.00
IUUC-Ago-007973 Ashbya gossypii 71.62 0.00e+00 800.00
IUUC-Acl-008287 Aspergillus clavatus 29.37 4.00e-49 186.00
IUUC-Afl-008504 Aspergillus flavus 30.06 2.00e-65 241.00
IUUC-Afu-008983 Aspergillus fumigatus 30.11 3.00e-43 167.00
IUUC-Ani-009315 Aspergillus nidulans 29.31 3.00e-52 197.00
IUUC-Ang-009690 Aspergillus niger 29.44 1.00e-58 219.00
IUUC-Aor-010181 Aspergillus oryzae 30.06 2.00e-65 241.00
IUUC-Ate-010498 Aspergillus terreus 30.13 6.00e-57 213.00
IUUC-Ame-011814 Astyanax mexicanus 31.08 8.00e-66 242.00
IUUC-Bgr-012273 Blumeria graminis 33.90 2.00e-76 278.00
IUUC-Bta-013068 Bos taurus 30.89 2.00e-63 234.00
IUUC-Bci-013930 Botrytis cinerea 34.65 1.00e-79 288.00
IUUC-Bdi-014876 Brachypodium distachyon 28.24 3.00e-40 157.00
IUUC-Bol-015366 Brassica oleracea 29.17 1.00e-38 152.00
IUUC-Bra-017589 Brassica rapa 27.72 6.00e-37 146.00
IUUC-Cel-018159 Caenorhabditis elegans 23.77 3.00e-28 117.00
IUUC-Cja-019139 Callithrix jacchus 30.60 4.00e-64 236.00
IUUC-Cfa-020742 Canis familiaris 29.92 4.00e-61 226.00
IUUC-Cpo-021707 Cavia porcellus 30.62 8.00e-65 239.00
IUUC-Cre-022665 Chlamydomonas reinhardtii 34.85 1.00e-63 235.00
IUUC-Csa-023024 Chlorocebus sabaeus 30.43 3.00e-64 237.00
IUUC-Cho-024487 Choloepus hoffmanni 36.44 5.00e-36 143.00
IUUC-Cin-025294 Ciona intestinalis 35.06 2.00e-72 264.00
IUUC-Cgl-026388 Colletotrichum gloeosporioides 31.26 1.00e-49 188.00
IUUC-Cne-026945 Cryptococcus neoformans 32.08 1.00e-62 231.00
IUUC-Cme-027108 Cyanidioschyzon merolae 26.29 2.00e-32 131.00
IUUC-Dre-028316 Danio rerio 32.31 8.00e-69 252.00
IUUC-Dno-028985 Dasypus novemcinctus 29.73 2.00e-61 227.00
IUUC-Dor-030219 Dipodomys ordii 24.04 9.00e-20 89.00
IUUC-Dse-031495 Dothistroma septosporum 27.82 5.00e-46 176.00
IUUC-Dme-031769 Drosophila melanogaster 31.14 3.00e-54 204.00
IUUC-Ete-032630 Echinops telfairi 37.21 2.00e-43 167.00
IUUC-Eca-033816 Equus caballus 30.89 3.00e-64 237.00
IUUC-Eeu-034840 Erinaceus europaeus 39.91 4.00e-40 157.00
IUUC-Fca-035751 Felis catus 30.50 3.00e-65 240.00
IUUC-Fal-036733 Ficedula albicollis 30.12 3.00e-63 234.00
IUUC-Fox-037743 Fusarium oxysporum 32.12 5.00e-65 239.00
IUUC-Fso-038395 Fusarium solani 31.74 6.00e-65 239.00
IUUC-Gmo-038803 Gadus morhua 33.41 4.00e-57 213.00
IUUC-Ggr-040092 Gaeumannomyces graminis 29.48 5.00e-53 200.00
IUUC-Gga-040714 Gallus gallus 29.65 3.00e-60 223.00
IUUC-Gac-042640 Gasterosteus aculeatus 29.83 1.00e-60 225.00
IUUC-Gma-044192 Glycine max 31.70 3.00e-44 171.00
IUUC-Ggo-045616 Gorilla gorilla 30.23 7.00e-64 236.00
IUUC-Hsa-046720 Homo sapiens 30.61 1.00e-60 225.00
IUUC-Itr-048796 Ictidomys tridecemlineatus 30.29 2.00e-64 238.00
IUUC-Kpa-049291 Komagataella pastoris 51.84 5.00e-154 535.00
IUUC-Lch-049729 Latimeria chalumnae 29.48 7.00e-59 219.00
IUUC-Lpe-051141 Leersia perrieri 25.28 2.00e-38 151.00
IUUC-Loc-051756 Lepisosteus oculatus 32.38 4.00e-69 253.00
IUUC-Lma-053083 Leptosphaeria maculans 32.02 2.00e-57 214.00
IUUC-Laf-054067 Loxodonta africana 31.47 2.00e-64 238.00
IUUC-Mcc-055096 Macaca mulatta 30.43 3.00e-64 237.00
IUUC-Meu-056604 Macropus eugenii 31.20 5.00e-46 176.00
IUUC-Mor-057186 Magnaporthe oryzae 31.02 9.00e-60 222.00
IUUC-Mtr-058346 Medicago truncatula 29.51 5.00e-45 173.00
IUUC-Mla-059116 Melampsora laricipopulina 31.87 1.00e-62 231.00
IUUC-Mga-060038 Meleagris gallopavo 25.90 2.00e-31 127.00
IUUC-Mvi-060272 Microbotryum violaceum 31.37 3.00e-65 240.00
IUUC-Mmr-060877 Microcebus murinus 30.81 2.00e-64 238.00
IUUC-Mdo-062168 Monodelphis domestica 31.06 2.00e-58 218.00
IUUC-Mmu-063441 Mus musculus 29.92 1.00e-62 231.00
IUUC-Mac-065330 Musa acuminata 27.81 8.00e-29 119.00
IUUC-Mpu-065704 Mustela putorius furo 30.50 2.00e-65 241.00
IUUC-Mlu-067640 Myotis lucifugus 31.27 8.00e-66 242.00
IUUC-Nfi-068589 Neosartorya fischeri 30.11 3.00e-43 167.00
IUUC-Ncr-068769 Neurospora crassa 30.14 9.00e-58 215.00
IUUC-Nle-069105 Nomascus leucogenys 31.14 1.00e-59 221.00
IUUC-Opr-070203 Ochotona princeps 31.40 7.00e-70 256.00
IUUC-Ont-072054 Oreochromis niloticus 31.95 9.00e-65 239.00
IUUC-Oan-073624 Ornithorhynchus anatinus 32.03 1.00e-52 198.00
IUUC-Ocu-074326 Oryctolagus cuniculus 30.43 2.00e-62 231.00
IUUC-Obr-076038 Oryza brachyantha 26.51 4.00e-32 130.00
IUUC-Ogl-077463 Oryza glaberrima 25.83 2.00e-36 144.00
IUUC-Ogu-078631 Oryza glumaepatula 25.93 3.00e-39 154.00
IUUC-Oin-079242 Oryza indica 26.03 1.00e-36 145.00
IUUC-Olo-080652 Oryza longistaminata 25.78 4.00e-36 144.00
IUUC-Ome-081109 Oryza meridionalis 24.71 4.00e-28 118.00
IUUC-Oni-082187 Oryza nivara 26.03 1.00e-36 145.00
IUUC-Opu-083995 Oryza punctata 25.58 4.00e-30 124.00
IUUC-Oru-084962 Oryza rufipogon 26.03 4.00e-30 124.00
IUUC-Osa-086201 Oryza sativa 26.03 4.00e-30 124.00
IUUC-Ola-087115 Oryzias latipes 30.69 8.00e-61 226.00
IUUC-Olu-087842 Ostreococcus lucimarinus 28.68 3.00e-45 174.00
IUUC-Oga-088204 Otolemur garnettii 30.12 1.00e-62 231.00
IUUC-Oar-089297 Ovis aries 29.87 5.00e-62 229.00
IUUC-Ptr-090953 Pan troglodytes 30.43 3.00e-64 237.00
IUUC-Pan-092451 Papio anubis 30.22 3.00e-63 233.00
IUUC-Psi-092999 Pelodiscus sinensis 30.35 4.00e-63 233.00
IUUC-Pma-094304 Petromyzon marinus 28.82 3.00e-48 184.00
IUUC-Pno-095060 Phaeosphaeria nodorum 31.82 1.00e-59 221.00
IUUC-Ppa-095433 Physcomitrella patens 34.91 7.00e-69 252.00
IUUC-Pfo-096433 Poecilia formosa 29.39 2.00e-59 221.00
IUUC-Pab-098677 Pongo abelii 30.43 2.00e-64 238.00
IUUC-Pop-099329 Populus trichocarpa 34.70 5.00e-40 156.00
IUUC-Pca-100444 Procavia capensis 38.37 3.00e-43 167.00
IUUC-Ppe-101318 Prunus persica 28.27 4.00e-50 190.00
IUUC-Pva-102162 Pteropus vampyrus 36.53 2.00e-36 144.00
IUUC-Pgr-103329 Puccinia graminis 29.72 3.00e-61 227.00
IUUC-Ptt-103837 Puccinia triticina 28.70 4.00e-61 227.00
IUUC-Pte-104133 Pyrenophora teres 33.14 2.00e-67 247.00
IUUC-Pyt-104675 Pyrenophora triticirepentis 32.95 1.00e-66 245.00
IUUC-Rno-105004 Rattus norvegicus 29.46 6.00e-62 229.00
IUUC-Sha-107199 Sarcophilus harrisii 31.01 4.00e-63 233.00
IUUC-Sja-107670 Schizosaccharomyces japonicus 36.05 7.00e-87 312.00
IUUC-Spo-108125 Schizosaccharomyces pombe 35.12 2.00e-85 307.00
IUUC-Ssl-108534 Sclerotinia sclerotiorum 35.03 8.00e-81 292.00
IUUC-Smo-109588 Selaginella moellendorffii 31.62 1.00e-65 241.00
IUUC-Sit-110043 Setaria italica 24.36 3.00e-22 97.40
IUUC-Stu-112396 Solanum tuberosum 29.55 1.00e-46 178.00
IUUC-Sar-113359 Sorex araneus 28.48 1.00e-29 121.00
IUUC-Sre-114995 Sporisorium reilianum 31.09 5.00e-66 243.00
IUUC-Ssc-115397 Sus scrofa 31.29 2.00e-65 241.00
IUUC-Tgu-116834 Taeniopygia guttata 30.12 8.00e-65 239.00
IUUC-Tru-118764 Takifugu rubripes 31.59 2.00e-67 247.00
IUUC-Tsy-119118 Tarsius syrichta 30.31 1.00e-63 234.00
IUUC-Tni-120053 Tetraodon nigroviridis 31.69 4.00e-67 246.00
IUUC-Tca-121842 Theobroma cacao 26.98 2.00e-39 154.00
IUUC-Tre-122172 Trichoderma reesei 32.08 1.00e-65 242.00
IUUC-Tvi-122288 Trichoderma virens 31.83 9.00e-55 205.00
IUUC-Tae-125722 Triticum aestivum 26.61 4.00e-25 107.00
IUUC-Tur-126846 Triticum urartu 30.51 2.00e-09 54.30
IUUC-Tme-127164 Tuber melanosporum 33.07 9.00e-80 288.00
IUUC-Tbe-127458 Tupaia belangeri 31.06 3.00e-60 223.00
IUUC-Ttr-128680 Tursiops truncatus 29.92 4.00e-62 229.00
IUUC-Uma-129508 Ustilago maydis 31.45 5.00e-65 239.00
IUUC-Vda-129696 Verticillium dahliae 35.96 3.00e-50 190.00
IUUC-Vpa-130820 Vicugna pacos 31.49 4.00e-67 246.00
IUUC-Vvi-131126 Vitis vinifera 30.56 3.00e-55 207.00
IUUC-Xtr-131826 Xenopus tropicalis 31.41 7.00e-65 239.00
IUUC-Xma-133373 Xiphophorus maculatus 29.76 9.00e-61 225.00
IUUC-Yli-134432 Yarrowia lipolytica 44.89 4.00e-118 416.00
IUUC-Zma-135241 Zea mays 26.88 5.00e-35 140.00
Created Date 25-Jun-2017

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