iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012856

UUCD1 version

UUC-BoT-00988

Ensembl Protein ID

ENSBTAP00000014523.3

UniProt Accession

Q5E9A4; RAE1L_BOVIN

Genbank Protein ID

AAX09033.1; AAI11249.1

Protein Name

mRNA export factor; Rae1 protein homolog; mRNA-associated protein mrnp 41

Genbank Nucleotide ID

BT021016; BC111248

Gene Name

RAE1; MRNP41

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000010934.3	ENSBTAT00000014523.3	ENSBTAP00000014523.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-18	66.2	126	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgv 34
           H ++v  +++   ++   + +Gs+D+t+k WD+r+ +
   Q: 126  HDAPVKTVHWikaPNySCVMTGSWDKTLKFWDTRSSN 162
           999**********877789*************99865 PP

Organism

Bos taurus

Functional Description
(View)

Binds mRNA. May function in nucleocytoplasmic transport and in directly or indirectly attaching cytoplasmic mRNPs to the cytoskeleton (By similarity).

Protein Sequence
(Fasta)

MSLFGTTSGF GSGGTSMFGS TTTDNHNPMK DIEVTSSPDD SIGCLSFSPP TLPGNFLIAG 60
SWANDVRCWE VQDSGQTIPK AQQMHTGPVL DVCWSDDGSK VFTASCDKTA KMWDLNSNQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGTAATG TCTCCGCGGT AATTAAGGCA ATTTCCTCGG CCGGCGTGAG GGGACCCCAG 60
TCCCTCGGGG TTAGCGTTCC TGTCACCTGG CCTTTGTCTC CTCCGCGCCC GAGCGGGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0001650--C:fibrillar center
GO:0005643--C:nuclear pore
GO:0003723--F:RNA binding
GO:0071407--P:cellular response to organic cyclic compound

KEGG

bta:513080

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000293	Aegilops tauschii	47.41	2.00e-82	299.00
IUUC-Aml-002179	Ailuropoda melanoleuca	100.00	0.00e+00	730.00
IUUC-Atr-002609	Amborella trichopoda	50.74	8.00e-94	337.00
IUUC-Apl-003637	Anas platyrhynchos	95.65	0.00e+00	704.00
IUUC-Aca-005042	Anolis carolinensis	95.65	0.00e+00	703.00
IUUC-Aly-006015	Arabidopsis lyrata	51.12	8.00e-98	350.00
IUUC-Ath-007659	Arabidopsis thaliana	50.84	3.00e-97	348.00
IUUC-Ago-008004	Ashbya gossypii	41.16	7.00e-73	267.00
IUUC-Acl-008030	Aspergillus clavatus	46.04	5.00e-81	294.00
IUUC-Afl-008636	Aspergillus flavus	46.04	1.00e-80	293.00
IUUC-Afu-009121	Aspergillus fumigatus	46.63	4.00e-82	298.00
IUUC-Ani-009238	Aspergillus nidulans	45.75	4.00e-80	291.00
IUUC-Ang-009801	Aspergillus niger	46.76	3.00e-80	291.00
IUUC-Aor-009974	Aspergillus oryzae	46.04	1.00e-80	293.00
IUUC-Ate-010406	Aspergillus terreus	45.75	2.00e-81	295.00
IUUC-Ame-011368	Astyanax mexicanus	91.88	0.00e+00	694.00
IUUC-Bgr-012233	Blumeria graminis	42.47	1.00e-70	259.00
IUUC-Bci-013964	Botrytis cinerea	45.16	1.00e-75	276.00
IUUC-Bdi-015050	Brachypodium distachyon	48.72	4.00e-85	308.00
IUUC-Bol-015367	Brassica oleracea	50.56	2.00e-94	338.00
IUUC-Bra-016903	Brassica rapa	50.56	2.00e-94	338.00
IUUC-Cel-018563	Caenorhabditis elegans	52.63	2.00e-99	355.00
IUUC-Cja-019700	Callithrix jacchus	99.42	0.00e+00	728.00
IUUC-Cfa-020337	Canis familiaris	99.71	0.00e+00	730.00
IUUC-Cpo-021858	Cavia porcellus	99.13	0.00e+00	727.00
IUUC-Cre-022748	Chlamydomonas reinhardtii	44.90	1.00e-82	299.00
IUUC-Csa-023322	Chlorocebus sabaeus	99.13	0.00e+00	726.00
IUUC-Cho-024533	Choloepus hoffmanni	71.59	2.00e-136	478.00
IUUC-Cin-025393	Ciona intestinalis	73.94	2.00e-161	561.00
IUUC-Csv-026093	Ciona savignyi	72.58	9.00e-162	562.00
IUUC-Cgl-026503	Colletotrichum gloeosporioides	37.57	3.00e-53	201.00
IUUC-Cne-026774	Cryptococcus neoformans	42.82	6.00e-68	250.00
IUUC-Cme-027243	Cyanidioschyzon merolae	36.73	3.00e-64	239.00
IUUC-Dre-028159	Danio rerio	92.46	0.00e+00	697.00
IUUC-Dno-028852	Dasypus novemcinctus	99.71	0.00e+00	730.00
IUUC-Dor-030445	Dipodomys ordii	83.19	4.00e-167	580.00
IUUC-Dse-031161	Dothistroma septosporum	42.98	3.00e-66	245.00
IUUC-Dme-032009	Drosophila melanogaster	68.77	8.00e-148	516.00
IUUC-Eca-033306	Equus caballus	99.13	0.00e+00	727.00
IUUC-Fca-035579	Felis catus	99.71	0.00e+00	730.00
IUUC-Fal-037582	Ficedula albicollis	96.23	0.00e+00	708.00
IUUC-Fox-037772	Fusarium oxysporum	42.43	3.00e-72	265.00
IUUC-Fso-038368	Fusarium solani	42.26	1.00e-72	266.00
IUUC-Gmo-038500	Gadus morhua	89.86	0.00e+00	680.00
IUUC-Ggr-040019	Gaeumannomyces graminis	42.77	5.00e-73	267.00
IUUC-Gga-040684	Gallus gallus	96.23	0.00e+00	706.00
IUUC-Gac-042592	Gasterosteus aculeatus	91.01	0.00e+00	685.00
IUUC-Gma-042917	Glycine max	51.86	1.00e-94	339.00
IUUC-Ggo-044965	Gorilla gorilla	99.42	0.00e+00	727.00
IUUC-Hsa-046779	Homo sapiens	99.37	0.00e+00	668.00
IUUC-Hvu-047380	Hordeum vulgare	49.00	9.00e-87	313.00
IUUC-Itr-048819	Ictidomys tridecemlineatus	99.42	0.00e+00	728.00
IUUC-Kpa-049284	Komagataella pastoris	43.57	2.00e-74	272.00
IUUC-Lch-050559	Latimeria chalumnae	81.67	1.00e-179	622.00
IUUC-Lpe-051050	Leersia perrieri	50.87	1.00e-93	336.00
IUUC-Loc-052874	Lepisosteus oculatus	92.17	0.00e+00	686.00
IUUC-Lma-053085	Leptosphaeria maculans	40.00	4.00e-64	238.00
IUUC-Laf-053980	Loxodonta africana	99.42	0.00e+00	729.00
IUUC-Mcc-055408	Macaca mulatta	99.42	0.00e+00	728.00
IUUC-Meu-056551	Macropus eugenii	89.64	0.00e+00	636.00
IUUC-Mor-057248	Magnaporthe oryzae	44.41	1.00e-75	276.00
IUUC-Mpo-057390	Magnaporthe poae	42.48	3.00e-72	265.00
IUUC-Mtr-057675	Medicago truncatula	50.84	1.00e-95	342.00
IUUC-Mla-059155	Melampsora laricipopulina	44.86	4.00e-84	305.00
IUUC-Mga-060140	Meleagris gallopavo	96.37	4.00e-180	623.00
IUUC-Mvi-060311	Microbotryum violaceum	45.59	2.00e-80	292.00
IUUC-Mmr-061533	Microcebus murinus	99.42	0.00e+00	729.00
IUUC-Mdo-062593	Monodelphis domestica	98.26	0.00e+00	721.00
IUUC-Mmu-063362	Mus musculus	99.42	0.00e+00	729.00
IUUC-Mac-064968	Musa acuminata	47.79	9.00e-84	303.00
IUUC-Mpu-065722	Mustela putorius furo	99.71	0.00e+00	731.00
IUUC-Mlu-068124	Myotis lucifugus	99.42	0.00e+00	729.00
IUUC-Nfi-068595	Neosartorya fischeri	46.63	2.00e-82	298.00
IUUC-Ncr-068790	Neurospora crassa	42.13	6.00e-74	270.00
IUUC-Nle-069395	Nomascus leucogenys	84.64	3.00e-170	591.00
IUUC-Opr-070320	Ochotona princeps	90.43	0.00e+00	649.00
IUUC-Ont-071303	Oreochromis niloticus	92.46	0.00e+00	694.00
IUUC-Oan-073724	Ornithorhynchus anatinus	97.39	0.00e+00	715.00
IUUC-Ocu-074961	Oryctolagus cuniculus	98.12	0.00e+00	666.00
IUUC-Oba-075879	Oryza barthii	51.34	2.00e-92	332.00
IUUC-Obr-076326	Oryza brachyantha	50.29	1.00e-93	335.00
IUUC-Ogl-077767	Oryza glaberrima	50.87	1.00e-93	335.00
IUUC-Ogu-078760	Oryza glumaepatula	50.14	6.00e-90	323.00
IUUC-Oin-080219	Oryza indica	50.87	1.00e-93	335.00
IUUC-Olo-081007	Oryza longistaminata	50.87	1.00e-93	335.00
IUUC-Ome-081848	Oryza meridionalis	47.55	2.00e-87	315.00
IUUC-Oni-082844	Oryza nivara	50.87	1.00e-93	335.00
IUUC-Opu-083511	Oryza punctata	47.54	3.00e-89	321.00
IUUC-Oru-085012	Oryza rufipogon	50.87	1.00e-93	335.00
IUUC-Osa-085287	Oryza sativa	50.87	1.00e-93	335.00
IUUC-Ola-087292	Oryzias latipes	91.88	0.00e+00	690.00
IUUC-Olu-087689	Ostreococcus lucimarinus	49.27	6.00e-91	327.00
IUUC-Oga-088821	Otolemur garnettii	99.71	0.00e+00	730.00
IUUC-Oar-090253	Ovis aries	99.71	0.00e+00	730.00
IUUC-Ptr-091097	Pan troglodytes	97.97	0.00e+00	718.00
IUUC-Pan-091835	Papio anubis	99.42	0.00e+00	728.00
IUUC-Psi-093000	Pelodiscus sinensis	96.53	0.00e+00	709.00
IUUC-Pma-094273	Petromyzon marinus	86.36	0.00e+00	664.00
IUUC-Pno-094920	Phaeosphaeria nodorum	39.27	1.00e-57	216.00
IUUC-Ppa-095202	Physcomitrella patens	51.30	2.00e-74	271.00
IUUC-Pfo-096388	Poecilia formosa	92.46	0.00e+00	696.00
IUUC-Pab-097533	Pongo abelii	99.42	0.00e+00	728.00
IUUC-Pop-099348	Populus trichocarpa	49.16	2.00e-89	322.00
IUUC-Pca-100638	Procavia capensis	79.05	6.00e-66	244.00
IUUC-Ppe-101817	Prunus persica	51.90	3.00e-95	341.00
IUUC-Pva-102233	Pteropus vampyrus	98.84	0.00e+00	723.00
IUUC-Pgr-103342	Puccinia graminis	45.14	5.00e-85	307.00
IUUC-Ptt-103836	Puccinia triticina	44.98	7.00e-86	310.00
IUUC-Pte-104387	Pyrenophora teres	41.16	2.00e-65	242.00
IUUC-Pyt-104737	Pyrenophora triticirepentis	41.13	5.00e-66	244.00
IUUC-Rno-105548	Rattus norvegicus	98.84	0.00e+00	724.00
IUUC-Sce-106379	Saccharomyces cerevisiae	42.20	6.00e-75	274.00
IUUC-Sha-107617	Sarcophilus harrisii	97.54	4.00e-146	509.00
IUUC-Sja-107668	Schizosaccharomyces japonicus	46.11	3.00e-79	288.00
IUUC-Spo-108293	Schizosaccharomyces pombe	47.08	7.00e-87	313.00
IUUC-Smo-109611	Selaginella moellendorffii	50.14	1.00e-94	339.00
IUUC-Sit-110436	Setaria italica	49.28	2.00e-91	328.00
IUUC-Sly-111037	Solanum lycopersicum	50.00	1.00e-96	345.00
IUUC-Sbi-114361	Sorghum bicolor	49.00	8.00e-92	330.00
IUUC-Sre-114922	Sporisorium reilianum	40.70	2.00e-65	243.00
IUUC-Ssc-116305	Sus scrofa	99.71	0.00e+00	730.00
IUUC-Tgu-116751	Taeniopygia guttata	96.23	0.00e+00	707.00
IUUC-Tru-117798	Takifugu rubripes	91.59	0.00e+00	685.00
IUUC-Tsy-119523	Tarsius syrichta	99.64	5.00e-168	583.00
IUUC-Tni-120477	Tetraodon nigroviridis	91.64	0.00e+00	684.00
IUUC-Tca-121802	Theobroma cacao	51.41	3.00e-96	345.00
IUUC-Tre-121994	Trichoderma reesei	43.49	2.00e-70	258.00
IUUC-Tvi-122631	Trichoderma virens	42.73	1.00e-68	253.00
IUUC-Tae-122978	Triticum aestivum	49.29	9.00e-86	310.00
IUUC-Tur-126390	Triticum urartu	50.58	2.00e-92	332.00
IUUC-Tme-127152	Tuber melanosporum	48.22	5.00e-80	291.00
IUUC-Tbe-127319	Tupaia belangeri	84.92	6.00e-125	440.00
IUUC-Ttr-129207	Tursiops truncatus	98.55	0.00e+00	715.00
IUUC-Uma-129342	Ustilago maydis	40.23	9.00e-60	223.00
IUUC-Vda-129865	Verticillium dahliae	41.84	5.00e-74	271.00
IUUC-Vpa-130076	Vicugna pacos	89.11	5.00e-163	566.00
IUUC-Vvi-131104	Vitis vinifera	51.00	5.00e-95	340.00
IUUC-Xtr-132917	Xenopus tropicalis	73.85	1.00e-146	512.00
IUUC-Xma-133615	Xiphophorus maculatus	92.46	0.00e+00	695.00
IUUC-Yli-134431	Yarrowia lipolytica	40.06	2.00e-71	262.00
IUUC-Zma-135142	Zea mays	49.86	4.00e-93	334.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence