iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017103

Ensembl Protein ID

Bra005439.1-P

UniProt Accession

M4CMK1; M4CMK1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005439	Bra005439.1	Bra005439.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-19	69.1	93	128
UBD/Beta-Prp	1.70e-44	153.2	12	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H+d v+ l    ++t+++sG d g +k+WD+r+  + 
   Q: 93   HEDAVNTL-ItvTETTIASGDDKGCVKIWDTRQRSCS 128
           99*****9.446779***************9988776 PP

UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvh...tlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgn 150
           ++f+p++++ + g  D+ ++++ ++t + ++   ++++h++s ++++f  +g+++v++s+d  i   d+etg  +  +++ h+++vn++ +   + 
   Q: 12   IDFHPSKNLVAAGLIDGQLHLYRYDTESSLVrerKVRAHKESCRAVRFIDDGQRIVTASADCSILATDVETGASVARLENAHEDAVNTLITVT-ET 106
           799*******************999888875222566**************************************999999999998876666.69 PP
   S: 151  llvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsi 246
            ++sG + ++v++Wd ++ ++ ++++  h+d++  +++ s++  lv+ s dgt+ + +l+t+++  + +  +d  +sv   +n+   ++g++ g +
   Q: 107  TIASGDDKGCVKIWDTRQRSCSHEFSV-HEDYISDMTIASDSMKLVATSGDGTLSVCNLRTNKVQAQSEFSEDELLSVVIMKNGRKAICGTQNGIL 201
           99***********************98.**********************************9999999999******************999998 PP
   S: 247  riW 249
            ++
   Q: 202  MLY 204
           874 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEIDLGANAF GIDFHPSKNL VAAGLIDGQL HLYRYDTESS LVRERKVRAH KESCRAVRFI 60
DDGQRIVTAS ADCSILATDV ETGASVARLE NAHEDAVNTL ITVTETTIAS GDDKGCVKIW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATCG ATTTGGGAGC AAACGCGTTC GGTATAGACT TCCACCCATC GAAGAATCTT 60
GTAGCTGCTG GTCTCATCGA TGGACAATTG CATCTGTAAC TCTCCAAAGC CACCCTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	53.47	2.00e-97	349.00
IUUC-Aml-001768	Ailuropoda melanoleuca	39.32	1.00e-59	224.00
IUUC-Atr-002764	Amborella trichopoda	57.42	7.00e-49	186.00
IUUC-Aca-005060	Anolis carolinensis	40.07	2.00e-58	220.00
IUUC-Bgr-012123	Blumeria graminis	24.32	1.00e-13	70.90
IUUC-Bta-013497	Bos taurus	40.00	4.00e-61	228.00
IUUC-Bdi-014378	Brachypodium distachyon	59.06	5.00e-104	370.00
IUUC-Bol-016352	Brassica oleracea	97.41	0.00e+00	666.00
IUUC-Cja-018792	Callithrix jacchus	38.64	1.00e-59	223.00
IUUC-Cfa-020739	Canis familiaris	39.32	9.00e-60	224.00
IUUC-Cpo-022331	Cavia porcellus	39.66	1.00e-60	226.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	48.15	1.00e-46	178.00
IUUC-Csa-023414	Chlorocebus sabaeus	38.31	1.00e-59	223.00
IUUC-Cho-024600	Choloepus hoffmanni	37.63	2.00e-56	212.00
IUUC-Cin-025565	Ciona intestinalis	31.86	2.00e-43	169.00
IUUC-Csv-026294	Ciona savignyi	34.04	2.00e-44	172.00
IUUC-Cne-026979	Cryptococcus neoformans	36.70	7.00e-46	177.00
IUUC-Cme-027192	Cyanidioschyzon merolae	31.19	3.00e-21	95.90
IUUC-Dre-028492	Danio rerio	37.63	2.00e-51	195.00
IUUC-Dno-030050	Dasypus novemcinctus	38.26	9.00e-56	211.00
IUUC-Dor-030386	Dipodomys ordii	35.02	1.00e-46	179.00
IUUC-Dme-032012	Drosophila melanogaster	32.99	2.00e-45	176.00
IUUC-Ete-032491	Echinops telfairi	39.66	6.00e-60	224.00
IUUC-Eca-033583	Equus caballus	40.00	4.00e-62	232.00
IUUC-Eeu-034976	Erinaceus europaeus	41.06	2.00e-52	199.00
IUUC-Fca-036417	Felis catus	40.34	3.00e-61	228.00
IUUC-Gmo-039505	Gadus morhua	36.95	5.00e-55	207.00
IUUC-Gga-040732	Gallus gallus	37.63	7.00e-53	200.00
IUUC-Gac-041313	Gasterosteus aculeatus	36.64	8.00e-55	207.00
IUUC-Ggo-044748	Gorilla gorilla	38.64	3.00e-60	225.00
IUUC-Hsa-046943	Homo sapiens	38.31	2.00e-59	222.00
IUUC-Hvu-047659	Hordeum vulgare	61.09	3.00e-105	374.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	39.66	2.00e-61	229.00
IUUC-Lch-050331	Latimeria chalumnae	35.21	4.00e-44	171.00
IUUC-Lpe-051193	Leersia perrieri	64.01	4.00e-111	394.00
IUUC-Loc-051946	Lepisosteus oculatus	38.46	1.00e-56	214.00
IUUC-Laf-054035	Loxodonta africana	40.00	4.00e-62	231.00
IUUC-Meu-056596	Macropus eugenii	37.97	2.00e-57	215.00
IUUC-Mtr-058587	Medicago truncatula	64.07	5.00e-131	460.00
IUUC-Mdo-062868	Monodelphis domestica	37.97	2.00e-57	217.00
IUUC-Mmu-064305	Mus musculus	38.98	1.00e-59	223.00
IUUC-Mpu-066779	Mustela putorius furo	39.32	3.00e-60	225.00
IUUC-Mlu-067223	Myotis lucifugus	39.66	5.00e-59	222.00
IUUC-Ncr-068919	Neurospora crassa	26.46	3.00e-12	65.90
IUUC-Nle-069852	Nomascus leucogenys	38.31	9.00e-59	220.00
IUUC-Ont-072452	Oreochromis niloticus	37.16	1.00e-57	216.00
IUUC-Ocu-074628	Oryctolagus cuniculus	39.32	5.00e-60	224.00
IUUC-Oba-075868	Oryza barthii	62.72	1.00e-107	382.00
IUUC-Obr-076768	Oryza brachyantha	64.36	1.00e-111	395.00
IUUC-Ogl-077424	Oryza glaberrima	63.76	1.00e-110	392.00
IUUC-Ogu-078847	Oryza glumaepatula	63.07	5.00e-108	383.00
IUUC-Oin-079495	Oryza indica	63.76	1.00e-110	392.00
IUUC-Olo-080268	Oryza longistaminata	63.41	2.00e-108	385.00
IUUC-Ome-081709	Oryza meridionalis	64.12	4.00e-98	350.00
IUUC-Oni-082749	Oryza nivara	63.76	1.00e-110	392.00
IUUC-Opu-084023	Oryza punctata	54.01	1.00e-84	305.00
IUUC-Oru-084764	Oryza rufipogon	63.07	5.00e-108	383.00
IUUC-Osa-086009	Oryza sativa	63.76	7.00e-111	393.00
IUUC-Ola-086463	Oryzias latipes	35.88	2.00e-50	192.00
IUUC-Olu-087897	Ostreococcus lucimarinus	42.27	6.00e-56	210.00
IUUC-Oga-089114	Otolemur garnettii	40.00	4.00e-62	231.00
IUUC-Ptr-090556	Pan troglodytes	38.31	9.00e-60	223.00
IUUC-Pan-092828	Papio anubis	38.31	6.00e-60	224.00
IUUC-Psi-093609	Pelodiscus sinensis	35.06	2.00e-44	174.00
IUUC-Pma-094413	Petromyzon marinus	37.97	8.00e-50	190.00
IUUC-Pfo-096389	Poecilia formosa	36.99	1.00e-55	210.00
IUUC-Pab-098095	Pongo abelii	38.98	2.00e-60	226.00
IUUC-Pca-100408	Procavia capensis	38.31	1.00e-57	216.00
IUUC-Pva-102549	Pteropus vampyrus	39.32	3.00e-61	228.00
IUUC-Pte-104351	Pyrenophora teres	27.20	2.00e-16	81.60
IUUC-Rno-105079	Rattus norvegicus	39.32	2.00e-60	226.00
IUUC-Sha-107299	Sarcophilus harrisii	40.34	1.00e-54	207.00
IUUC-Spo-108122	Schizosaccharomyces pombe	29.11	4.00e-27	115.00
IUUC-Smo-109613	Selaginella moellendorffii	52.19	4.00e-78	284.00
IUUC-Sit-110621	Setaria italica	61.13	9.00e-112	396.00
IUUC-Sly-110988	Solanum lycopersicum	69.70	2.00e-122	431.00
IUUC-Stu-112713	Solanum tuberosum	69.31	2.00e-123	434.00
IUUC-Sre-115136	Sporisorium reilianum	30.94	3.00e-16	79.30
IUUC-Ssc-116268	Sus scrofa	39.66	2.00e-60	227.00
IUUC-Tru-117977	Takifugu rubripes	40.65	2.00e-53	202.00
IUUC-Tsy-119121	Tarsius syrichta	39.51	4.00e-31	128.00
IUUC-Tni-119904	Tetraodon nigroviridis	37.63	4.00e-56	211.00
IUUC-Tae-124219	Triticum aestivum	61.43	4.00e-106	377.00
IUUC-Tbe-127276	Tupaia belangeri	41.46	4.00e-53	201.00
IUUC-Vpa-130276	Vicugna pacos	38.25	1.00e-41	162.00
IUUC-Xtr-132529	Xenopus tropicalis	39.01	3.00e-58	220.00
IUUC-Xma-134177	Xiphophorus maculatus	36.99	5.00e-52	198.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence