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Tag Content
UUCD2 ID IUUC-Pop-099511
UUCD1 version UUC-PoT-00772
Ensembl Protein ID POPTR_0001s30230.1
UniProt Accession B9GI86; B9GI86_POPTR
Genbank Protein ID EEE85070.2
Protein Name WD-40 repeat family protein
Genbank Nucleotide ID CM000337
Gene Name POPTRDRAFT_175495; POPTR_0001s30230g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s30230 POPTR_0001s30230.1 POPTR_0001s30230.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.60e-19 68.8 99 129
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H ++v+c+++     + +++Gs+D+t+k+WD+
   Q: 99   HDAPVRCIEYsyaA-GQVITGSWDKTLKCWDP 129
           999*******6432.88**************6 PP
   
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MTAVIPPPFS GRELSNPPTD GISNLRFSNH SDLLLVSSWD KTVRLYDASA NALRGEFLHG 60
GAVLDCCFHD DSSGFSASGD NTVRRLVFNH GKEDILGRHD APVRCIEYSY AAGQVITGSW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Pop-099511|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GAAAAACATG GAAGATTGAA AACCGTGACG ATCACTATTG ATCAATCCAT CTGTAAGTAG 60
ATCACCGTTG CCTGCCCCAA TCTTATTTTG AATTTAAAAA TTCAAATCCC CCTCTCTCCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-099511|E3,WD_repeat|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
KEGG pop:POPTR_0001s30230g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002418 Ailuropoda melanoleuca 55.45 5.00e-107 380.00
IUUC-Atr-002511 Amborella trichopoda 87.68 0.00e+00 640.00
IUUC-Apl-003201 Anas platyrhynchos 55.14 7.00e-105 373.00
IUUC-Aca-004657 Anolis carolinensis 55.28 2.00e-106 378.00
IUUC-Aly-006428 Arabidopsis lyrata 86.57 3.00e-178 616.00
IUUC-Ath-007030 Arabidopsis thaliana 85.38 4.00e-178 616.00
IUUC-Acl-008120 Aspergillus clavatus 44.25 2.00e-76 278.00
IUUC-Afu-009061 Aspergillus fumigatus 44.25 9.00e-78 283.00
IUUC-Ani-009457 Aspergillus nidulans 45.56 9.00e-79 286.00
IUUC-Ang-009848 Aspergillus niger 44.54 1.00e-74 273.00
IUUC-Aor-009886 Aspergillus oryzae 44.54 1.00e-70 259.00
IUUC-Ate-010388 Aspergillus terreus 45.11 2.00e-76 278.00
IUUC-Ame-011039 Astyanax mexicanus 54.35 2.00e-103 368.00
IUUC-Bgr-012134 Blumeria graminis 42.49 7.00e-75 273.00
IUUC-Bta-012959 Bos taurus 55.59 1.00e-107 382.00
IUUC-Bci-013818 Botrytis cinerea 46.88 4.00e-78 284.00
IUUC-Bdi-014928 Brachypodium distachyon 84.29 1.00e-172 598.00
IUUC-Cel-018211 Caenorhabditis elegans 38.41 4.00e-62 231.00
IUUC-Cja-018807 Callithrix jacchus 55.59 2.00e-107 381.00
IUUC-Cfa-020279 Canis familiaris 57.72 7.00e-86 309.00
IUUC-Cpo-022411 Cavia porcellus 55.59 2.00e-107 381.00
IUUC-Cre-022964 Chlamydomonas reinhardtii 51.75 3.00e-90 324.00
IUUC-Csa-024046 Chlorocebus sabaeus 54.80 2.00e-80 291.00
IUUC-Cho-024930 Choloepus hoffmanni 54.97 3.00e-106 377.00
IUUC-Cin-025561 Ciona intestinalis 51.07 7.00e-97 346.00
IUUC-Csv-026129 Ciona savignyi 51.68 1.00e-97 348.00
IUUC-Cgl-026764 Colletotrichum gloeosporioides 41.88 5.00e-72 263.00
IUUC-Cne-026832 Cryptococcus neoformans 41.64 5.00e-60 224.00
IUUC-Dre-028257 Danio rerio 56.27 3.00e-99 354.00
IUUC-Dno-029433 Dasypus novemcinctus 55.59 2.00e-107 381.00
IUUC-Dor-030318 Dipodomys ordii 55.59 6.00e-108 383.00
IUUC-Dse-031530 Dothistroma septosporum 38.61 2.00e-57 215.00
IUUC-Dme-031609 Drosophila melanogaster 46.08 4.00e-83 300.00
IUUC-Ete-032903 Echinops telfairi 60.00 3.00e-62 231.00
IUUC-Eca-034333 Equus caballus 55.59 2.00e-107 381.00
IUUC-Fca-035848 Felis catus 55.59 2.00e-107 381.00
IUUC-Fal-037239 Ficedula albicollis 55.59 1.00e-106 379.00
IUUC-Fox-037712 Fusarium oxysporum 42.94 2.00e-70 258.00
IUUC-Fso-038165 Fusarium solani 42.86 4.00e-70 257.00
IUUC-Gmo-039586 Gadus morhua 53.89 1.00e-101 362.00
IUUC-Gga-040565 Gallus gallus 55.59 3.00e-106 377.00
IUUC-Gac-041299 Gasterosteus aculeatus 53.42 1.00e-103 369.00
IUUC-Gma-042865 Glycine max 90.68 2.00e-178 617.00
IUUC-Ggo-045135 Gorilla gorilla 55.59 2.00e-107 381.00
IUUC-Hsa-045788 Homo sapiens 55.59 2.00e-107 381.00
IUUC-Itr-048845 Ictidomys tridecemlineatus 55.59 1.00e-107 382.00
IUUC-Lch-050423 Latimeria chalumnae 56.21 2.00e-108 385.00
IUUC-Lpe-051670 Leersia perrieri 86.40 9.00e-178 615.00
IUUC-Loc-052148 Lepisosteus oculatus 54.35 3.00e-104 370.00
IUUC-Lma-053147 Leptosphaeria maculans 43.44 3.00e-72 264.00
IUUC-Laf-054429 Loxodonta africana 54.83 1.00e-104 372.00
IUUC-Mcc-055649 Macaca mulatta 55.59 2.00e-107 381.00
IUUC-Meu-056019 Macropus eugenii 47.66 1.00e-82 299.00
IUUC-Mor-057136 Magnaporthe oryzae 37.65 3.00e-54 204.00
IUUC-Mtr-058803 Medicago truncatula 90.99 0.00e+00 639.00
IUUC-Mga-059227 Meleagris gallopavo 55.28 2.00e-104 371.00
IUUC-Mmr-060811 Microcebus murinus 55.59 2.00e-107 381.00
IUUC-Mdo-062582 Monodelphis domestica 53.15 3.00e-104 370.00
IUUC-Mmu-064048 Mus musculus 55.59 1.00e-107 382.00
IUUC-Mac-064572 Musa acuminata 85.45 3.00e-172 597.00
IUUC-Mpu-066592 Mustela putorius furo 55.59 2.00e-107 381.00
IUUC-Mlu-067466 Myotis lucifugus 56.60 1.00e-107 382.00
IUUC-Nfi-068486 Neosartorya fischeri 44.25 2.00e-78 285.00
IUUC-Ncr-068899 Neurospora crassa 40.79 1.00e-70 259.00
IUUC-Nle-069273 Nomascus leucogenys 55.59 2.00e-107 381.00
IUUC-Opr-070473 Ochotona princeps 54.97 9.00e-105 372.00
IUUC-Ont-072515 Oreochromis niloticus 53.42 2.00e-103 368.00
IUUC-Oan-073344 Ornithorhynchus anatinus 54.80 6.00e-93 332.00
IUUC-Ocu-073931 Oryctolagus cuniculus 55.90 2.00e-107 381.00
IUUC-Oba-075450 Oryza barthii 86.71 2.00e-177 614.00
IUUC-Obr-076202 Oryza brachyantha 86.71 1.00e-177 615.00
IUUC-Ogl-077809 Oryza glaberrima 86.71 2.00e-177 613.00
IUUC-Ogu-078034 Oryza glumaepatula 81.25 7.00e-173 598.00
IUUC-Oin-079586 Oryza indica 86.71 2.00e-177 614.00
IUUC-Olo-080351 Oryza longistaminata 80.62 2.00e-155 540.00
IUUC-Ome-081913 Oryza meridionalis 66.67 2.00e-129 454.00
IUUC-Oni-082048 Oryza nivara 86.71 2.00e-177 614.00
IUUC-Opu-083951 Oryza punctata 86.71 2.00e-177 614.00
IUUC-Oru-084904 Oryza rufipogon 86.71 3.00e-177 613.00
IUUC-Osa-085399 Oryza sativa 86.40 2.00e-176 610.00
IUUC-Ola-086605 Oryzias latipes 54.04 1.00e-103 369.00
IUUC-Oga-088115 Otolemur garnettii 55.59 2.00e-107 381.00
IUUC-Oar-089301 Ovis aries 55.28 6.00e-107 380.00
IUUC-Pan-092156 Papio anubis 55.59 2.00e-107 381.00
IUUC-Psi-094031 Pelodiscus sinensis 55.90 2.00e-107 381.00
IUUC-Pma-094724 Petromyzon marinus 53.73 2.00e-104 371.00
IUUC-Pno-094848 Phaeosphaeria nodorum 44.71 2.00e-57 215.00
IUUC-Ppa-096018 Physcomitrella patens 83.44 2.00e-161 560.00
IUUC-Pfo-096256 Poecilia formosa 54.04 3.00e-104 370.00
IUUC-Pab-097757 Pongo abelii 55.59 2.00e-107 381.00
IUUC-Pca-100326 Procavia capensis 58.16 5.00e-84 303.00
IUUC-Ppe-101462 Prunus persica 92.40 0.00e+00 634.00
IUUC-Pva-102523 Pteropus vampyrus 55.59 2.00e-107 381.00
IUUC-Pte-104350 Pyrenophora teres 43.15 6.00e-72 263.00
IUUC-Pyt-104538 Pyrenophora triticirepentis 43.44 2.00e-72 265.00
IUUC-Sha-106976 Sarcophilus harrisii 55.59 2.00e-107 381.00
IUUC-Ssl-108521 Sclerotinia sclerotiorum 43.03 4.00e-45 174.00
IUUC-Smo-109187 Selaginella moellendorffii 80.78 1.00e-160 558.00
IUUC-Sly-111541 Solanum lycopersicum 91.05 5.00e-178 615.00
IUUC-Stu-112371 Solanum tuberosum 90.74 1.00e-177 614.00
IUUC-Sar-113159 Sorex araneus 44.58 3.00e-58 217.00
IUUC-Sbi-114880 Sorghum bicolor 85.50 4.00e-175 606.00
IUUC-Sre-115205 Sporisorium reilianum 38.54 5.00e-56 211.00
IUUC-Ssc-116399 Sus scrofa 55.59 2.00e-107 381.00
IUUC-Tgu-117029 Taeniopygia guttata 55.45 1.00e-105 375.00
IUUC-Tru-118385 Takifugu rubripes 53.42 5.00e-103 366.00
IUUC-Tsy-118842 Tarsius syrichta 55.28 3.00e-107 380.00
IUUC-Tni-120539 Tetraodon nigroviridis 53.25 8.00e-102 362.00
IUUC-Tca-121027 Theobroma cacao 94.83 0.00e+00 651.00
IUUC-Tre-122098 Trichoderma reesei 43.80 6.00e-71 260.00
IUUC-Tvi-122569 Trichoderma virens 43.23 2.00e-70 258.00
IUUC-Tae-123002 Triticum aestivum 84.80 6.00e-172 595.00
IUUC-Tme-127210 Tuber melanosporum 50.30 3.00e-87 314.00
IUUC-Tbe-128159 Tupaia belangeri 38.20 2.00e-60 224.00
IUUC-Ttr-128743 Tursiops truncatus 55.59 2.00e-107 381.00
IUUC-Uma-129496 Ustilago maydis 36.92 1.00e-47 183.00
IUUC-Vda-129882 Verticillium dahliae 42.54 3.00e-71 261.00
IUUC-Vpa-130790 Vicugna pacos 54.92 1.00e-86 311.00
IUUC-Vvi-131671 Vitis vinifera 91.42 0.00e+00 645.00
IUUC-Xtr-132887 Xenopus tropicalis 49.08 3.00e-85 307.00
IUUC-Xma-134127 Xiphophorus maculatus 54.04 4.00e-104 370.00
IUUC-Yli-134366 Yarrowia lipolytica 41.22 6.00e-54 203.00
Created Date 25-Jun-2017

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