iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076334

Ensembl Protein ID

OB11G24770.1

UniProt Accession

J3N9J1; J3N9J1_ORYBR

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB11G24770	OB11G24770.1	OB11G24770.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-24	85.4	50	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v++++   d t+l++Gs D t k+WD+ tg+ l
   Q: 50   GHNGAVWSCDVsRDsTRLITGSADQTAKLWDVQTGREL 87
           8***********777*******************9876 PP

Organism

Oryza brachyantha

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLRYNR DGDLLFSCXX XXXXXXXXXX RGARLGTCRG HNGAVWSCDV 60
SRDSTRLITG SADQTAKLWD VQTGRELFTF RFDAPARSVE FAIGDGLAVI TTDNFMDNAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCGA TCCTGATGAA GGGGCACGAG CGCCCCCTCA CGTTCCTCCG CTACAACCGC 60
GACGGGGACC TCCTCTTCTC CTGCGNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	95.00	6.00e-64	237.00
IUUC-Aml-001321	Ailuropoda melanoleuca	43.08	6.00e-78	283.00
IUUC-Atr-002468	Amborella trichopoda	72.43	3.00e-98	349.00
IUUC-Apl-003841	Anas platyrhynchos	43.08	8.00e-79	286.00
IUUC-Aca-005123	Anolis carolinensis	42.64	4.00e-80	290.00
IUUC-Aly-005473	Arabidopsis lyrata	74.39	4.00e-144	502.00
IUUC-Ath-007094	Arabidopsis thaliana	72.56	1.00e-141	494.00
IUUC-Ago-008000	Ashbya gossypii	39.82	1.00e-68	252.00
IUUC-Acl-008098	Aspergillus clavatus	43.81	5.00e-74	270.00
IUUC-Afl-008494	Aspergillus flavus	44.65	2.00e-77	281.00
IUUC-Afu-009080	Aspergillus fumigatus	42.60	2.00e-72	264.00
IUUC-Ani-009230	Aspergillus nidulans	44.95	1.00e-76	278.00
IUUC-Aor-010114	Aspergillus oryzae	44.65	2.00e-77	281.00
IUUC-Ate-010285	Aspergillus terreus	43.73	5.00e-75	273.00
IUUC-Ame-011534	Astyanax mexicanus	43.28	6.00e-80	290.00
IUUC-Bgr-012121	Blumeria graminis	41.05	1.00e-68	252.00
IUUC-Bta-013143	Bos taurus	43.25	2.00e-78	284.00
IUUC-Bci-013950	Botrytis cinerea	44.04	5.00e-76	276.00
IUUC-Bdi-015019	Brachypodium distachyon	86.20	2.00e-166	577.00
IUUC-Bol-015709	Brassica oleracea	74.24	6.00e-144	503.00
IUUC-Bra-017760	Brassica rapa	74.24	4.00e-145	507.00
IUUC-Cel-018226	Caenorhabditis elegans	37.27	3.00e-63	234.00
IUUC-Cja-019741	Callithrix jacchus	42.94	2.00e-78	284.00
IUUC-Cfa-021204	Canis familiaris	42.77	2.00e-77	281.00
IUUC-Cpo-021661	Cavia porcellus	42.77	1.00e-77	282.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	50.61	4.00e-97	346.00
IUUC-Csa-024038	Chlorocebus sabaeus	42.94	2.00e-78	284.00
IUUC-Cin-025597	Ciona intestinalis	45.09	3.00e-82	297.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	42.68	7.00e-72	263.00
IUUC-Cne-026838	Cryptococcus neoformans	41.34	6.00e-73	266.00
IUUC-Cme-027304	Cyanidioschyzon merolae	50.93	6.00e-84	303.00
IUUC-Dre-028567	Danio rerio	42.64	1.00e-80	292.00
IUUC-Dno-029171	Dasypus novemcinctus	43.08	2.00e-77	282.00
IUUC-Dor-030257	Dipodomys ordii	27.27	1.00e-18	86.30
IUUC-Dse-031191	Dothistroma septosporum	42.55	2.00e-73	268.00
IUUC-Dme-031879	Drosophila melanogaster	45.20	7.00e-81	293.00
IUUC-Ete-032336	Echinops telfairi	38.25	2.00e-41	161.00
IUUC-Eca-033259	Equus caballus	42.77	2.00e-77	281.00
IUUC-Eeu-035153	Erinaceus europaeus	42.34	7.00e-26	110.00
IUUC-Fca-036489	Felis catus	42.77	2.00e-77	281.00
IUUC-Fal-037485	Ficedula albicollis	42.77	1.00e-78	285.00
IUUC-Fox-037860	Fusarium oxysporum	43.08	6.00e-73	266.00
IUUC-Fso-038188	Fusarium solani	43.08	1.00e-72	265.00
IUUC-Gmo-039311	Gadus morhua	42.77	3.00e-79	287.00
IUUC-Ggr-040045	Gaeumannomyces graminis	43.38	7.00e-73	266.00
IUUC-Gga-040645	Gallus gallus	42.22	3.00e-77	281.00
IUUC-Gac-042086	Gasterosteus aculeatus	43.25	5.00e-78	283.00
IUUC-Gma-043246	Glycine max	78.83	2.00e-153	534.00
IUUC-Ggo-045578	Gorilla gorilla	42.94	2.00e-78	284.00
IUUC-Hsa-046734	Homo sapiens	42.94	2.00e-78	284.00
IUUC-Hvu-047553	Hordeum vulgare	86.20	2.00e-166	577.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	42.77	2.00e-77	281.00
IUUC-Kpa-049325	Komagataella pastoris	43.73	7.00e-75	273.00
IUUC-Lch-049620	Latimeria chalumnae	42.86	3.00e-71	260.00
IUUC-Lpe-051338	Leersia perrieri	88.10	7.00e-164	568.00
IUUC-Loc-052094	Lepisosteus oculatus	38.15	4.00e-66	243.00
IUUC-Lma-053047	Leptosphaeria maculans	44.48	6.00e-77	280.00
IUUC-Laf-053801	Loxodonta africana	42.95	3.00e-75	274.00
IUUC-Mcc-055498	Macaca mulatta	38.96	4.00e-63	233.00
IUUC-Meu-056729	Macropus eugenii	39.63	3.00e-69	254.00
IUUC-Mor-057025	Magnaporthe oryzae	42.77	5.00e-71	260.00
IUUC-Mpo-057511	Magnaporthe poae	44.95	2.00e-73	268.00
IUUC-Mtr-058051	Medicago truncatula	78.53	1.00e-153	534.00
IUUC-Mla-059061	Melampsora laricipopulina	41.72	5.00e-72	263.00
IUUC-Mga-059229	Meleagris gallopavo	42.51	3.00e-76	277.00
IUUC-Mvi-060399	Microbotryum violaceum	41.07	2.00e-69	254.00
IUUC-Mmr-060764	Microcebus murinus	43.25	5.00e-79	286.00
IUUC-Mdo-062088	Monodelphis domestica	42.81	2.00e-78	284.00
IUUC-Mmu-064304	Mus musculus	42.94	2.00e-78	285.00
IUUC-Mac-065520	Musa acuminata	78.82	5.00e-151	525.00
IUUC-Mpu-066340	Mustela putorius furo	42.77	2.00e-77	281.00
IUUC-Mlu-067111	Myotis lucifugus	43.08	5.00e-78	283.00
IUUC-Nfi-068478	Neosartorya fischeri	42.90	2.00e-73	268.00
IUUC-Ncr-068820	Neurospora crassa	44.00	5.00e-73	266.00
IUUC-Nle-069903	Nomascus leucogenys	42.77	8.00e-78	282.00
IUUC-Opr-070221	Ochotona princeps	42.02	1.00e-75	275.00
IUUC-Ont-071765	Oreochromis niloticus	43.25	4.00e-81	293.00
IUUC-Oan-073660	Ornithorhynchus anatinus	43.36	2.00e-67	248.00
IUUC-Ocu-074039	Oryctolagus cuniculus	42.77	1.00e-77	282.00
IUUC-Oba-075395	Oryza barthii	84.66	4.00e-159	552.00
IUUC-Ogl-077751	Oryza glaberrima	93.56	0.00e+00	627.00
IUUC-Ogu-078207	Oryza glumaepatula	91.38	9.00e-177	611.00
IUUC-Oin-079878	Oryza indica	92.02	3.00e-178	616.00
IUUC-Olo-080677	Oryza longistaminata	80.26	2.00e-172	597.00
IUUC-Ome-081228	Oryza meridionalis	67.92	3.00e-85	306.00
IUUC-Oni-082411	Oryza nivara	81.60	4.00e-151	526.00
IUUC-Opu-083136	Oryza punctata	93.25	0.00e+00	625.00
IUUC-Oru-084916	Oryza rufipogon	90.15	2.00e-176	610.00
IUUC-Osa-085776	Oryza sativa	93.56	0.00e+00	627.00
IUUC-Ola-087053	Oryzias latipes	43.56	2.00e-80	291.00
IUUC-Olu-087602	Ostreococcus lucimarinus	56.31	2.00e-106	377.00
IUUC-Oga-088154	Otolemur garnettii	43.08	3.00e-78	284.00
IUUC-Oar-089915	Ovis aries	43.08	1.00e-77	282.00
IUUC-Ptr-091124	Pan troglodytes	34.67	6.00e-53	199.00
IUUC-Pan-092035	Papio anubis	42.94	2.00e-78	284.00
IUUC-Psi-094096	Pelodiscus sinensis	47.67	5.00e-52	196.00
IUUC-Pno-094988	Phaeosphaeria nodorum	42.15	1.00e-69	255.00
IUUC-Ppa-095949	Physcomitrella patens	71.78	4.00e-141	493.00
IUUC-Pfo-096101	Poecilia formosa	42.33	1.00e-79	288.00
IUUC-Pab-097726	Pongo abelii	42.94	2.00e-78	284.00
IUUC-Pop-099617	Populus trichocarpa	76.38	4.00e-148	516.00
IUUC-Pca-101014	Procavia capensis	43.25	1.00e-78	285.00
IUUC-Ppe-101320	Prunus persica	77.91	8.00e-152	528.00
IUUC-Pva-102789	Pteropus vampyrus	40.18	8.00e-67	246.00
IUUC-Pgr-103479	Puccinia graminis	41.72	3.00e-72	264.00
IUUC-Ptt-103981	Puccinia triticina	41.72	4.00e-73	267.00
IUUC-Pte-104278	Pyrenophora teres	44.17	3.00e-74	271.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	44.17	3.00e-74	271.00
IUUC-Rno-105867	Rattus norvegicus	56.93	3.00e-44	171.00
IUUC-Sce-106251	Saccharomyces cerevisiae	39.76	2.00e-69	254.00
IUUC-Sha-107039	Sarcophilus harrisii	42.81	2.00e-78	284.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	41.41	7.00e-74	269.00
IUUC-Spo-108314	Schizosaccharomyces pombe	43.87	2.00e-80	291.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	43.73	9.00e-76	275.00
IUUC-Smo-108728	Selaginella moellendorffii	68.92	7.00e-134	468.00
IUUC-Sit-110801	Setaria italica	88.04	1.00e-170	591.00
IUUC-Sly-111326	Solanum lycopersicum	74.54	1.00e-145	508.00
IUUC-Stu-112458	Solanum tuberosum	76.38	1.00e-147	514.00
IUUC-Sbi-114063	Sorghum bicolor	85.58	2.00e-167	580.00
IUUC-Sre-115096	Sporisorium reilianum	42.99	1.00e-69	255.00
IUUC-Ssc-116080	Sus scrofa	43.25	1.00e-78	285.00
IUUC-Tgu-116988	Taeniopygia guttata	42.77	2.00e-78	285.00
IUUC-Tru-118766	Takifugu rubripes	43.58	2.00e-80	291.00
IUUC-Tni-120197	Tetraodon nigroviridis	42.94	2.00e-80	291.00
IUUC-Tca-121316	Theobroma cacao	78.53	7.00e-152	528.00
IUUC-Tre-122097	Trichoderma reesei	43.94	8.00e-72	262.00
IUUC-Tvi-122442	Trichoderma virens	43.33	5.00e-71	260.00
IUUC-Tae-125800	Triticum aestivum	85.89	1.00e-165	574.00
IUUC-Tur-126334	Triticum urartu	78.22	3.00e-146	509.00
IUUC-Tme-127038	Tuber melanosporum	43.73	4.00e-77	280.00
IUUC-Ttr-128659	Tursiops truncatus	40.80	2.00e-59	221.00
IUUC-Uma-129464	Ustilago maydis	42.99	3.00e-69	254.00
IUUC-Vda-129841	Verticillium dahliae	43.25	3.00e-72	264.00
IUUC-Vvi-131076	Vitis vinifera	77.30	8.00e-152	528.00
IUUC-Xtr-132395	Xenopus tropicalis	44.48	1.00e-80	292.00
IUUC-Xma-133383	Xiphophorus maculatus	42.33	2.00e-79	288.00
IUUC-Yli-134586	Yarrowia lipolytica	41.34	1.00e-62	232.00
IUUC-Zma-135904	Zea mays	87.12	9.00e-170	588.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence