iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015317

Ensembl Protein ID

Bo2g028390.1

UniProt Accession

A0A0D3AL65; A0A0D3AL65_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo2g028390	Bo2g028390.1	Bo2g028390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-18	67.3	164	195

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H+ +vtcl+f    +++l+sG   g+i vWD+
   Q: 164  HSRRVTCLEFhptRNNILLSGDKKGQIGVWDF 195
           999********653399**************5 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MGLTRNRRKK EPEIVIARDT ESSSSEEEEE EDDDDYPLSE SEKGDEAVKI ELEKSKAKGK 60
APITVKLKKV CKVCKQPGHE AGFKGATYID CPMKPCFLCK MPGHTTMSCP HRVVTDHRIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTTAA CGAGGAACAG AAGAAAAAAG GAACCAGAAA TCGTCATTGC CAGGGATACA 60
GAGTCAAGTT CGTCCGAAGA GGAAGAAGAA GAAGATGATG ATGATTACCC TTTGTCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair
GO:0010224--P:response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	67.48	0.00e+00	631.00
IUUC-Aml-002203	Ailuropoda melanoleuca	30.15	3.00e-33	135.00
IUUC-Atr-002957	Amborella trichopoda	69.33	0.00e+00	663.00
IUUC-Apl-003832	Anas platyrhynchos	33.44	4.00e-40	159.00
IUUC-Aca-004358	Anolis carolinensis	32.63	1.00e-42	167.00
IUUC-Aly-006296	Arabidopsis lyrata	86.79	0.00e+00	899.00
IUUC-Ath-007115	Arabidopsis thaliana	87.00	0.00e+00	860.00
IUUC-Ame-010817	Astyanax mexicanus	32.61	7.00e-43	167.00
IUUC-Bta-012914	Bos taurus	31.10	3.00e-37	149.00
IUUC-Bdi-014261	Brachypodium distachyon	67.92	0.00e+00	637.00
IUUC-Bra-016848	Brassica rapa	94.16	0.00e+00	917.00
IUUC-Cja-018967	Callithrix jacchus	29.70	6.00e-35	141.00
IUUC-Cfa-021238	Canis familiaris	30.25	6.00e-32	131.00
IUUC-Cpo-022063	Cavia porcellus	30.98	1.00e-34	140.00
IUUC-Csa-023382	Chlorocebus sabaeus	29.70	1.00e-34	140.00
IUUC-Dre-028732	Danio rerio	31.79	5.00e-35	142.00
IUUC-Dor-030461	Dipodomys ordii	35.56	5.00e-30	124.00
IUUC-Ete-033038	Echinops telfairi	30.79	2.00e-33	136.00
IUUC-Eca-033772	Equus caballus	30.98	2.00e-35	143.00
IUUC-Fca-036095	Felis catus	29.75	2.00e-32	133.00
IUUC-Gmo-039683	Gadus morhua	33.44	3.00e-46	178.00
IUUC-Gga-040530	Gallus gallus	33.94	1.00e-40	160.00
IUUC-Gac-041517	Gasterosteus aculeatus	32.10	2.00e-37	149.00
IUUC-Gma-043378	Glycine max	75.52	0.00e+00	731.00
IUUC-Ggo-045364	Gorilla gorilla	30.30	1.00e-35	144.00
IUUC-Hsa-046354	Homo sapiens	30.30	1.00e-35	144.00
IUUC-Hvu-047151	Hordeum vulgare	72.06	5.00e-123	433.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	31.90	6.00e-37	147.00
IUUC-Lpe-051256	Leersia perrieri	67.44	6.00e-177	613.00
IUUC-Loc-052398	Lepisosteus oculatus	31.68	5.00e-40	158.00
IUUC-Laf-053562	Loxodonta africana	31.61	2.00e-36	146.00
IUUC-Mcc-055197	Macaca mulatta	29.79	9.00e-30	124.00
IUUC-Meu-056151	Macropus eugenii	31.56	3.00e-31	128.00
IUUC-Mtr-057940	Medicago truncatula	75.99	0.00e+00	697.00
IUUC-Mga-059923	Meleagris gallopavo	34.04	1.00e-42	167.00
IUUC-Mmr-061465	Microcebus murinus	31.32	1.00e-30	126.00
IUUC-Mdo-063063	Monodelphis domestica	32.83	3.00e-40	159.00
IUUC-Mmu-064294	Mus musculus	31.69	2.00e-36	146.00
IUUC-Mac-065598	Musa acuminata	68.61	0.00e+00	657.00
IUUC-Mpu-066831	Mustela putorius furo	29.75	9.00e-32	130.00
IUUC-Mlu-067222	Myotis lucifugus	30.67	2.00e-34	139.00
IUUC-Nle-069581	Nomascus leucogenys	30.61	4.00e-36	145.00
IUUC-Opr-070644	Ochotona princeps	31.38	3.00e-36	145.00
IUUC-Ont-072605	Oreochromis niloticus	31.99	2.00e-39	156.00
IUUC-Oan-072973	Ornithorhynchus anatinus	33.03	3.00e-40	158.00
IUUC-Ocu-074615	Oryctolagus cuniculus	30.67	5.00e-36	145.00
IUUC-Oba-075283	Oryza barthii	66.07	3.00e-170	591.00
IUUC-Obr-076605	Oryza brachyantha	68.62	0.00e+00	636.00
IUUC-Ogl-077512	Oryza glaberrima	67.12	6.00e-175	607.00
IUUC-Ogu-078329	Oryza glumaepatula	66.29	2.00e-170	592.00
IUUC-Oin-079980	Oryza indica	66.29	4.00e-170	590.00
IUUC-Olo-080516	Oryza longistaminata	67.95	1.00e-171	595.00
IUUC-Ome-081415	Oryza meridionalis	66.29	3.00e-174	604.00
IUUC-Oni-082985	Oryza nivara	66.29	4.00e-170	590.00
IUUC-Opu-084159	Oryza punctata	68.62	0.00e+00	635.00
IUUC-Oru-085137	Oryza rufipogon	67.42	4.00e-176	611.00
IUUC-Osa-085614	Oryza sativa	67.42	4.00e-176	610.00
IUUC-Ola-087044	Oryzias latipes	33.02	7.00e-42	164.00
IUUC-Oga-088274	Otolemur garnettii	31.91	1.00e-36	147.00
IUUC-Oar-089826	Ovis aries	31.10	4.00e-37	148.00
IUUC-Ptr-091631	Pan troglodytes	30.30	1.00e-35	144.00
IUUC-Pan-092535	Papio anubis	29.70	2.00e-35	142.00
IUUC-Psi-093815	Pelodiscus sinensis	32.21	1.00e-37	150.00
IUUC-Pma-094474	Petromyzon marinus	33.03	9.00e-39	154.00
IUUC-Ppa-095414	Physcomitrella patens	59.91	3.00e-163	568.00
IUUC-Pfo-096559	Poecilia formosa	33.64	3.00e-41	162.00
IUUC-Pab-098528	Pongo abelii	30.30	2.00e-35	143.00
IUUC-Pop-100064	Populus trichocarpa	75.25	0.00e+00	744.00
IUUC-Pca-100803	Procavia capensis	30.86	7.00e-36	144.00
IUUC-Ppe-101966	Prunus persica	74.40	0.00e+00	718.00
IUUC-Pva-103213	Pteropus vampyrus	30.98	3.00e-36	145.00
IUUC-Rno-105087	Rattus norvegicus	32.11	2.00e-37	149.00
IUUC-Sha-107466	Sarcophilus harrisii	33.53	8.00e-42	164.00
IUUC-Smo-108958	Selaginella moellendorffii	56.55	3.00e-154	538.00
IUUC-Sit-109968	Setaria italica	67.68	1.00e-171	596.00
IUUC-Sly-111495	Solanum lycopersicum	68.85	0.00e+00	699.00
IUUC-Sar-113272	Sorex araneus	30.40	1.00e-33	136.00
IUUC-Sbi-114706	Sorghum bicolor	64.40	1.00e-159	556.00
IUUC-Ssc-115437	Sus scrofa	31.71	5.00e-33	135.00
IUUC-Tgu-116602	Taeniopygia guttata	29.35	2.00e-40	160.00
IUUC-Tru-118698	Takifugu rubripes	33.44	4.00e-36	145.00
IUUC-Tsy-119027	Tarsius syrichta	30.21	3.00e-28	119.00
IUUC-Tni-119787	Tetraodon nigroviridis	31.78	4.00e-44	172.00
IUUC-Tca-121447	Theobroma cacao	76.15	0.00e+00	711.00
IUUC-Tae-124613	Triticum aestivum	67.68	0.00e+00	635.00
IUUC-Tur-126724	Triticum urartu	67.15	0.00e+00	632.00
IUUC-Tbe-127680	Tupaia belangeri	28.98	2.00e-26	112.00
IUUC-Vvi-131001	Vitis vinifera	78.89	0.00e+00	724.00
IUUC-Xtr-132266	Xenopus tropicalis	33.95	2.00e-43	169.00
IUUC-Xma-133034	Xiphophorus maculatus	32.82	8.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence