iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108190

Ensembl Protein ID

SPAC12G12.10.1:pep

UniProt Accession

Q09873; WDR21_SCHPO

Genbank Protein ID

CAA91505.1

Protein Name

WD repeat-containing protein 21

Genbank Nucleotide ID

CU329670

Gene Name

wdr21; SPAC12G12.10

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC12G12.10	SPAC12G12.10.1	SPAC12G12.10.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-08	31.6	253	284

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sdtllvsGsdDgtikvWDlrtg 33
           +++v++l++  d+l+++G++++++ v+Dlrt 
   Q: 253  KGDVFSLKYlGDNLVIAGCRNKSVLVYDLRTK 284
           679*****9978*****************996 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MSGLPFHIPG YYYNSEKKRY FRIISSGQST PSSNIYTKER LKRGKRFNNI SKERTKGKGG 60
NPVFNFSTYL FDRQFSQYPY SCNDDRDYLC AKNLKKINLR QLPVGTELQK IGWLREVNTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACATTTTAA CAAAACCTTT TTTGTTTTTA ATTTCTTTTG CTTACCATCA ATCCCTGGGT 60
TATGAGCGGA CTACCATTTC ATATTCCCGG TTATTATTAC AATTCTGAAA AAAAGCGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0070913--C:Ddb1-Wdr21 complex
GO:0005634--C:nucleus
GO:0006282--P:regulation of DNA repair

KEGG

spo:SPAC12G12.10

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001929	Ailuropoda melanoleuca	27.33	1.00e-08	52.40
IUUC-Atr-002556	Amborella trichopoda	36.71	2.00e-06	45.40
IUUC-Aly-005883	Arabidopsis lyrata	24.31	7.00e-09	53.10
IUUC-Afl-008573	Aspergillus flavus	22.74	1.00e-08	52.00
IUUC-Aor-010226	Aspergillus oryzae	21.56	3.00e-06	43.90
IUUC-Ate-010340	Aspergillus terreus	21.43	8.00e-09	53.10
IUUC-Bta-012668	Bos taurus	25.33	9.00e-07	46.20
IUUC-Cfa-020441	Canis familiaris	27.33	2.00e-08	52.00
IUUC-Cpo-021299	Cavia porcellus	23.40	3.00e-08	51.20
IUUC-Csa-023185	Chlorocebus sabaeus	25.00	2.00e-12	65.50
IUUC-Eca-033466	Equus caballus	26.67	2.00e-08	51.60
IUUC-Eeu-034995	Erinaceus europaeus	28.40	5.00e-09	53.10
IUUC-Fca-036199	Felis catus	27.33	2.00e-08	52.00
IUUC-Ggo-045348	Gorilla gorilla	24.75	6.00e-13	67.00
IUUC-Hsa-046746	Homo sapiens	24.75	7.00e-13	66.60
IUUC-Itr-048472	Ictidomys tridecemlineatus	27.33	1.00e-08	52.80
IUUC-Mvi-060223	Microbotryum violaceum	24.42	6.00e-06	43.50
IUUC-Mmu-063420	Mus musculus	25.33	1.00e-07	49.70
IUUC-Mac-065231	Musa acuminata	32.69	2.00e-12	65.10
IUUC-Mpu-065692	Mustela putorius furo	27.33	2.00e-08	51.60
IUUC-Nle-070145	Nomascus leucogenys	25.00	2.00e-12	65.50
IUUC-Ocu-073925	Oryctolagus cuniculus	23.27	3.00e-06	44.70
IUUC-Oar-090048	Ovis aries	26.00	6.00e-08	50.10
IUUC-Ptr-091658	Pan troglodytes	24.75	7.00e-13	66.60
IUUC-Pan-092873	Papio anubis	25.00	2.00e-12	64.70
IUUC-Pab-098465	Pongo abelii	22.80	3.00e-08	51.20
IUUC-Pca-100845	Procavia capensis	27.16	6.00e-07	47.00
IUUC-Pva-103203	Pteropus vampyrus	26.67	3.00e-07	48.10
IUUC-Pte-104308	Pyrenophora teres	26.97	9.00e-04	36.60
IUUC-Pyt-104455	Pyrenophora triticirepentis	24.55	7.00e-06	43.50
IUUC-Rno-105675	Rattus norvegicus	25.33	1.00e-07	49.30
IUUC-Sha-107389	Sarcophilus harrisii	22.41	8.00e-10	56.60
IUUC-Sja-107847	Schizosaccharomyces japonicus	25.58	5.00e-31	126.00
IUUC-Sly-110888	Solanum lycopersicum	27.64	1.00e-08	52.40
IUUC-Ssc-116005	Sus scrofa	24.67	1.00e-06	46.20
IUUC-Tsy-118784	Tarsius syrichta	28.09	7.00e-10	56.20
IUUC-Ttr-129237	Tursiops truncatus	26.00	4.00e-07	47.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence