iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015731

Ensembl Protein ID

Bo6g039710.1

UniProt Accession

A0A0D3CRC9; A0A0D3CRC9_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo6g039710	Bo6g039710.1	Bo6g039710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-34	117.2	200	240
UBD/Beta-Prp	4.00e-66	224.7	24	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+ +v+c+++    d ++l++GsdD+t kvWD+ t  +++s
   Q: 200  HQKGVNCVDYftgGDkPYLITGSDDHTAKVWDYQTKSCVQS 240
           9999****966*9778*******************999986 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           k+ +++++++++cv+ +p +++++++ ++gt+ +w+++t+ + +s++  + +v++ kf++++++ v g++D+ i+v++++t + v ++++h+d++++
   Q: 24   KKKFAQRSERVKCVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTDLPVRSAKFISRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRC 120
           5667788999*************************************************************************************** PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls..fdsngk 193
           ++++p+  +++s s+d  i++wd+e+g+   ++++gh++ v+ v+++p++ n ++s+slDrt+++W+l + +   tl   h++ v++++     +++
   Q: 121  VAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDtNTFASASLDRTIKIWNLGSPDPNFTLDA-HQKGVNCVDyfTGGDKP 216
           ****************************9999*********************************************98.*********6444555* PP
   S: 194  elvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvl 282
           +l++gs+d t k+wd+qt++cv++l ght nv+ v f+p+  ++++gs+Dg++riW  ++  l +tl++  ++v+++ +++ +++v++ 
   Q: 217  YLITGSDDHTAKVWDYQTKSCVQSLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIG 305
           *****************************************************************************997777777654 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MCVTTDYWFL CLILLEQPLR LEIKKKFAQR SERVKCVDLH PTEPWILASL YSGTLCIWNY 60
QTQVMAKSFE VTDLPVRSAK FISRKQWVVA GADDMYIRVY NYNTMDKVKV FEAHSDYIRC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGTGTTA CTACTGACTA CTGGTTTCTC TGTCTTATTT TGTTGGAACA GCCTCTCAGA 60
CTCGAGATCA AGGTACTATT GTTTTTACTA TGTGGATTTC TTTTAAATCA TTCACTCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR015007--NUP2/50/61
IPR011993--PH_dom-like
IPR000156--Ran_bind_dom
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50196--RANBD1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF08911--NUP50
PF00638--Ran_BP1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00160--RanBD
SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005643--C:nuclear pore
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002154	Ailuropoda melanoleuca	61.26	0.00e+00	1110.00
IUUC-Apl-003976	Anas platyrhynchos	59.65	0.00e+00	1110.00
IUUC-Ame-010922	Astyanax mexicanus	56.14	0.00e+00	971.00
IUUC-Bra-017758	Brassica rapa	96.67	0.00e+00	1764.00
IUUC-Cpo-022201	Cavia porcellus	61.26	0.00e+00	1110.00
IUUC-Dme-031791	Drosophila melanogaster	56.81	0.00e+00	1008.00
IUUC-Eca-034180	Equus caballus	59.98	0.00e+00	1070.00
IUUC-Eeu-035086	Erinaceus europaeus	50.54	5.00e-125	442.00
IUUC-Fal-037202	Ficedula albicollis	59.38	0.00e+00	1065.00
IUUC-Hvu-047669	Hordeum vulgare	86.83	0.00e+00	693.00
IUUC-Itr-048212	Ictidomys tridecemlineatus	61.26	0.00e+00	1109.00
IUUC-Laf-053757	Loxodonta africana	61.23	0.00e+00	1105.00
IUUC-Mcc-054859	Macaca mulatta	61.14	0.00e+00	1110.00
IUUC-Meu-056174	Macropus eugenii	52.66	5.00e-112	398.00
IUUC-Mpu-065961	Mustela putorius furo	61.26	0.00e+00	1109.00
IUUC-Oan-073416	Ornithorhynchus anatinus	60.78	0.00e+00	1054.00
IUUC-Ome-081762	Oryza meridionalis	75.97	0.00e+00	1380.00
IUUC-Osa-086026	Oryza sativa	82.88	0.00e+00	1518.00
IUUC-Oga-088163	Otolemur garnettii	59.13	0.00e+00	1058.00
IUUC-Pma-094695	Petromyzon marinus	56.73	0.00e+00	984.00
IUUC-Ppa-095638	Physcomitrella patens	76.57	0.00e+00	1406.00
IUUC-Pfo-096587	Poecilia formosa	60.82	0.00e+00	1109.00
IUUC-Smo-108695	Selaginella moellendorffii	79.04	0.00e+00	1385.00
IUUC-Tgu-117239	Taeniopygia guttata	60.05	0.00e+00	1115.00
IUUC-Tni-120142	Tetraodon nigroviridis	59.60	0.00e+00	1102.00
IUUC-Vvi-131689	Vitis vinifera	86.51	0.00e+00	1592.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence