iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_024214	EOY08929	EOY08929
TCM_024214	EOY08931	EOY08931
TCM_024214	EOY08930	EOY08930
TCM_024214	EOY08932	EOY08932

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-06	29.4	160	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtllvsGsdDgtikvWDl 30
            vtc+     ++l++sG +Dg i+ W +
   Q: 160  AVTCMVGdeGNGLVWSGHRDGRIRGWKM 187
           5788755653399*************97 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDANDDIPSP SPRIFDRYAS SSDDDSQPSY PSLHSTNRRL DYMIQFLDRN LLPQHSSSPN 60
AFLPEFVAKG GGQGIFTLPD RRALHPNRPP HLELRPHPLR ETQFGRFLKT IATTDRQLWA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTAAA GTCAACTTTA TTACTAGTTA CAGTACTGCA AGGGTCCGTG GTTTCAGACA 60
AATAGAAAAG AAAATGCCTG AATAACCAAC TAACTAACCG ATAAGAGTAT TGCAAAGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0255--Endonuclease
KW-0269--Exonuclease
KW-0378--Hydrolase
KW-0472--Membrane
KW-0540--Nuclease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR005135--Endo/exonuclease/phosphatase
IPR013783--Ig-like_fold
IPR000300--IPPc
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat

Pfam

PF03372--Exo_endo_phos

SMART

SM00128--IPPc
SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004519--F:endonuclease activity
GO:0004527--F:exonuclease activity
GO:0046856--P:phosphatidylinositol dephosphorylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000080	Aegilops tauschii	51.82	0.00e+00	790.00
IUUC-Aml-002070	Ailuropoda melanoleuca	30.99	2.00e-13	71.20
IUUC-Apl-003974	Anas platyrhynchos	28.22	4.00e-13	67.80
IUUC-Aca-005378	Anolis carolinensis	30.50	1.00e-13	72.00
IUUC-Aly-006165	Arabidopsis lyrata	61.47	0.00e+00	1379.00
IUUC-Ath-007439	Arabidopsis thaliana	61.52	0.00e+00	1378.00
IUUC-Ame-011017	Astyanax mexicanus	30.28	3.00e-13	70.90
IUUC-Bta-012727	Bos taurus	21.67	6.00e-14	72.80
IUUC-Bdi-014932	Brachypodium distachyon	52.04	0.00e+00	749.00
IUUC-Bol-015514	Brassica oleracea	60.59	0.00e+00	1360.00
IUUC-Bra-017433	Brassica rapa	59.69	0.00e+00	1340.00
IUUC-Cja-018903	Callithrix jacchus	30.99	1.00e-13	71.60
IUUC-Cfa-020608	Canis familiaris	30.99	2.00e-13	70.90
IUUC-Cpo-022246	Cavia porcellus	30.28	5.00e-13	69.70
IUUC-Csa-023678	Chlorocebus sabaeus	21.43	2.00e-13	71.60
IUUC-Csv-026341	Ciona savignyi	30.77	2.00e-07	48.90
IUUC-Dno-029135	Dasypus novemcinctus	30.99	2.00e-13	70.90
IUUC-Dor-030926	Dipodomys ordii	21.67	2.00e-14	74.30
IUUC-Ete-032574	Echinops telfairi	30.99	9.00e-14	72.00
IUUC-Eca-033206	Equus caballus	30.99	2.00e-13	70.90
IUUC-Eeu-035061	Erinaceus europaeus	25.38	4.00e-09	56.20
IUUC-Fca-035667	Felis catus	30.99	2.00e-13	71.20
IUUC-Fal-037608	Ficedula albicollis	30.50	1.00e-12	68.60
IUUC-Gmo-039701	Gadus morhua	30.99	3.00e-14	73.60
IUUC-Gga-040763	Gallus gallus	31.47	7.00e-14	72.40
IUUC-Gac-041841	Gasterosteus aculeatus	30.99	1.00e-13	72.00
IUUC-Ggo-044653	Gorilla gorilla	23.02	7.00e-22	99.00
IUUC-Hsa-046945	Homo sapiens	23.02	8.00e-22	99.00
IUUC-Hvu-047344	Hordeum vulgare	50.31	0.00e+00	854.00
IUUC-Itr-048935	Ictidomys tridecemlineatus	30.99	2.00e-13	71.20
IUUC-Lch-049783	Latimeria chalumnae	27.72	6.00e-13	69.30
IUUC-Lpe-051350	Leersia perrieri	50.00	0.00e+00	848.00
IUUC-Loc-051902	Lepisosteus oculatus	27.72	2.00e-13	71.20
IUUC-Laf-053841	Loxodonta africana	30.99	2.00e-13	71.20
IUUC-Mcc-054722	Macaca mulatta	21.43	1.00e-13	71.60
IUUC-Mga-059983	Meleagris gallopavo	31.47	7.00e-13	68.60
IUUC-Mmr-061678	Microcebus murinus	21.46	2.00e-13	71.60
IUUC-Mdo-062116	Monodelphis domestica	23.50	6.00e-19	89.40
IUUC-Mmu-063296	Mus musculus	31.69	9.00e-14	72.40
IUUC-Mac-064702	Musa acuminata	52.51	0.00e+00	1026.00
IUUC-Mlu-067677	Myotis lucifugus	30.28	3.00e-13	70.50
IUUC-Nle-069861	Nomascus leucogenys	30.99	2.00e-13	71.20
IUUC-Ont-072117	Oreochromis niloticus	32.39	2.00e-14	74.70
IUUC-Ocu-073778	Oryctolagus cuniculus	23.02	3.00e-22	100.00
IUUC-Ola-087139	Oryzias latipes	30.99	5.00e-14	73.20
IUUC-Oga-088063	Otolemur garnettii	30.99	3.00e-13	70.90
IUUC-Oar-089504	Ovis aries	21.67	5.00e-14	73.20
IUUC-Ptr-091417	Pan troglodytes	23.02	8.00e-22	99.00
IUUC-Pan-091929	Papio anubis	21.43	2.00e-13	71.60
IUUC-Psi-093089	Pelodiscus sinensis	22.84	3.00e-09	56.60
IUUC-Pfo-096245	Poecilia formosa	30.99	2.00e-13	71.60
IUUC-Pab-097756	Pongo abelii	30.99	2.00e-13	70.90
IUUC-Pop-099048	Populus trichocarpa	51.26	4.00e-85	306.00
IUUC-Pca-101115	Procavia capensis	23.50	1.00e-06	48.90
IUUC-Ppe-102007	Prunus persica	65.10	0.00e+00	1448.00
IUUC-Pva-103091	Pteropus vampyrus	21.43	1.00e-13	71.60
IUUC-Rno-105658	Rattus norvegicus	31.69	7.00e-14	72.40
IUUC-Sha-106481	Sarcophilus harrisii	24.04	2.00e-22	100.00
IUUC-Sit-110772	Setaria italica	50.93	0.00e+00	927.00
IUUC-Ssc-115602	Sus scrofa	30.99	2.00e-13	71.20
IUUC-Tgu-117278	Taeniopygia guttata	30.28	3.00e-13	70.10
IUUC-Tru-118384	Takifugu rubripes	30.99	8.00e-14	72.40
IUUC-Tsy-118900	Tarsius syrichta	29.60	2.00e-08	54.30
IUUC-Tni-120022	Tetraodon nigroviridis	30.28	2.00e-13	70.90
IUUC-Tae-123404	Triticum aestivum	50.67	0.00e+00	868.00
IUUC-Tur-126312	Triticum urartu	52.66	0.00e+00	806.00
IUUC-Vvi-131031	Vitis vinifera	60.43	0.00e+00	1214.00
IUUC-Xma-133287	Xiphophorus maculatus	30.99	2.00e-13	71.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence