iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Eca-033593

Ensembl Protein ID

ENSECAP00000022584.1

UniProt Accession

F6RKT2; F6RKT2_HORSE

Protein Name

Uncharacterized protein

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSECAG00000024991.1	ENSECAT00000027002.1	ENSECAP00000022584.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-16	60.1	51	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H++ vt++++ ++ +++v+++ D + +vW l
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWTL 81
           9**********888***************75 PP

Organism

Equus caballus

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKSGA KWVKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGHTWKPTL VILRINRAAR CVRWAPNENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCCGGTT CGGCGCGTCG ACTGCCCAGA GTCCGCGGCC GGGGCGCCCC GAGGTGAGGG 60
GGCGCGGGGG GAAAGGGGGG GCGGGATGCG GGGATGTGAA GGGGCGCAGG AGGGGGCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0051015--F:actin filament binding
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

ecb:100059292

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.20	4.00e-64	238.00
IUUC-Aml-001709	Ailuropoda melanoleuca	94.69	0.00e+00	713.00
IUUC-Ath-006683	Arabidopsis thaliana	41.73	6.00e-80	290.00
IUUC-Ame-011512	Astyanax mexicanus	78.23	0.00e+00	632.00
IUUC-Bta-012442	Bos taurus	93.82	0.00e+00	702.00
IUUC-Cja-019899	Callithrix jacchus	95.19	0.00e+00	721.00
IUUC-Cfa-020067	Canis familiaris	94.10	0.00e+00	709.00
IUUC-Cpo-022461	Cavia porcellus	96.25	0.00e+00	718.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	34.69	8.00e-35	139.00
IUUC-Csa-023277	Chlorocebus sabaeus	87.67	0.00e+00	672.00
IUUC-Dre-028141	Danio rerio	78.49	0.00e+00	625.00
IUUC-Dor-030559	Dipodomys ordii	95.44	0.00e+00	723.00
IUUC-Ete-032299	Echinops telfairi	91.96	0.00e+00	702.00
IUUC-Fca-036254	Felis catus	95.98	0.00e+00	717.00
IUUC-Fal-037453	Ficedula albicollis	86.40	0.00e+00	673.00
IUUC-Gmo-038471	Gadus morhua	68.53	5.00e-159	553.00
IUUC-Gga-040898	Gallus gallus	86.06	0.00e+00	675.00
IUUC-Gac-042236	Gasterosteus aculeatus	72.77	8.00e-173	599.00
IUUC-Ggo-045355	Gorilla gorilla	80.48	3.00e-164	571.00
IUUC-Hsa-046623	Homo sapiens	96.25	0.00e+00	718.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	96.25	0.00e+00	728.00
IUUC-Lch-049679	Latimeria chalumnae	77.42	3.00e-180	623.00
IUUC-Lpe-050869	Leersia perrieri	40.95	2.00e-77	282.00
IUUC-Loc-052140	Lepisosteus oculatus	79.03	5.00e-178	616.00
IUUC-Laf-054287	Loxodonta africana	92.57	0.00e+00	687.00
IUUC-Meu-056302	Macropus eugenii	89.01	0.00e+00	697.00
IUUC-Mga-059279	Meleagris gallopavo	86.06	0.00e+00	676.00
IUUC-Mmr-060752	Microcebus murinus	95.58	0.00e+00	706.00
IUUC-Mdo-062836	Monodelphis domestica	85.25	0.00e+00	657.00
IUUC-Mmu-064099	Mus musculus	94.16	0.00e+00	705.00
IUUC-Mpu-066247	Mustela putorius furo	95.71	0.00e+00	709.00
IUUC-Mlu-067571	Myotis lucifugus	95.17	0.00e+00	722.00
IUUC-Nle-069492	Nomascus leucogenys	82.04	5.00e-166	576.00
IUUC-Opr-070519	Ochotona princeps	98.24	2.00e-133	468.00
IUUC-Ont-071316	Oreochromis niloticus	74.35	9.00e-172	595.00
IUUC-Oan-072692	Ornithorhynchus anatinus	86.86	0.00e+00	683.00
IUUC-Ocu-074187	Oryctolagus cuniculus	91.42	0.00e+00	697.00
IUUC-Oba-075379	Oryza barthii	41.10	6.00e-78	284.00
IUUC-Obr-076404	Oryza brachyantha	41.48	1.00e-78	286.00
IUUC-Ogl-077409	Oryza glaberrima	38.69	8.00e-72	263.00
IUUC-Ogu-078759	Oryza glumaepatula	41.10	6.00e-78	284.00
IUUC-Oin-079118	Oryza indica	41.14	1.00e-78	286.00
IUUC-Olo-081055	Oryza longistaminata	44.64	3.00e-69	255.00
IUUC-Ome-081281	Oryza meridionalis	41.10	7.00e-78	284.00
IUUC-Oni-083043	Oryza nivara	41.10	6.00e-78	284.00
IUUC-Oru-084839	Oryza rufipogon	41.10	6.00e-78	284.00
IUUC-Osa-085377	Oryza sativa	41.14	1.00e-78	286.00
IUUC-Oga-088610	Otolemur garnettii	95.71	0.00e+00	716.00
IUUC-Oar-089639	Ovis aries	92.47	0.00e+00	684.00
IUUC-Ptr-091023	Pan troglodytes	96.51	0.00e+00	721.00
IUUC-Pan-091727	Papio anubis	95.71	0.00e+00	724.00
IUUC-Pfo-097058	Poecilia formosa	72.77	3.00e-172	597.00
IUUC-Pab-098238	Pongo abelii	95.98	0.00e+00	721.00
IUUC-Pca-100580	Procavia capensis	92.49	0.00e+00	696.00
IUUC-Ppe-101681	Prunus persica	41.42	2.00e-80	292.00
IUUC-Pva-102928	Pteropus vampyrus	92.49	0.00e+00	679.00
IUUC-Rno-104846	Rattus norvegicus	95.71	0.00e+00	714.00
IUUC-Sly-111048	Solanum lycopersicum	42.32	2.00e-76	279.00
IUUC-Sar-113404	Sorex araneus	97.07	3.00e-139	487.00
IUUC-Sbi-114685	Sorghum bicolor	41.53	4.00e-77	281.00
IUUC-Tru-118106	Takifugu rubripes	72.70	1.00e-173	602.00
IUUC-Tni-120079	Tetraodon nigroviridis	74.02	2.00e-175	607.00
IUUC-Tur-126640	Triticum urartu	39.50	1.00e-67	249.00
IUUC-Ttr-128698	Tursiops truncatus	94.91	0.00e+00	716.00
IUUC-Vvi-131647	Vitis vinifera	41.08	3.00e-79	288.00
IUUC-Xtr-131893	Xenopus tropicalis	81.50	0.00e+00	645.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence