iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105951

Ensembl Protein ID

ENSRNOP00000052090.1

UniProt Accession

A0JPP0; A0JPP0_RAT

Genbank Protein ID

AAI27524.1; EDM18093.1

Protein Name

Similar to ubiquilin 1 isoform 2; Similar to ubiquilin 1 isoform 2 (Predicted)

Genbank Nucleotide ID

AC105631; CH473956

Gene Name

RGD1562433; RGD1562433_predicted; rCG_39636

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000036807.2	ENSRNOT00000055216.2	ENSRNOP00000052090.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	5.20e-14	52.3	24	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           +++ vkt+++ + e+ + e+++v ++K++i+k   ++ +++ LIy GkiL+D++ Ls+ gi dgs+vh vv+ 
   Q: 24   IRVSVKTPQDCQ-EFFLAENSNVHRFKKQISKYLHCDTDRLVLIYTGKILQDQDILSQRGILDGSTVHAVVRS 95
           6899***99999.99*******************************************************997 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MARAREEAGD SQLVSGRESS SRIIRVSVKT PQDCQEFFLA ENSNVHRFKK QISKYLHCDT 60
DRLVLIYTGK ILQDQDILSQ RGILDGSTVH AVVRSRLKGS ACTGTLAGPT GHCTHRSEPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGTGACTG TAGGGCTACA CTGGCAGGGG GGACCTGCAG GACGTAGGTG AAAGGACATC 60
ACCGAACACC TACTGGTCCC TTAACCCAGG TGTGCTCAGT GCCACATCAA AGCTTCCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005739--C:mitochondrion

KEGG

rno:499222

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001783	Ailuropoda melanoleuca	65.44	0.00e+00	628.00
IUUC-Bta-013009	Bos taurus	64.55	1.00e-179	622.00
IUUC-Cfa-021125	Canis familiaris	63.39	6.00e-151	527.00
IUUC-Cpo-021665	Cavia porcellus	65.18	6.00e-172	597.00
IUUC-Dno-029389	Dasypus novemcinctus	65.38	5.00e-169	587.00
IUUC-Eca-034270	Equus caballus	66.28	2.00e-165	575.00
IUUC-Fca-035593	Felis catus	56.84	4.00e-135	474.00
IUUC-Itr-048754	Ictidomys tridecemlineatus	68.30	0.00e+00	645.00
IUUC-Laf-054365	Loxodonta africana	63.01	2.00e-168	585.00
IUUC-Mdo-062710	Monodelphis domestica	46.10	9.00e-84	304.00
IUUC-Mmu-064404	Mus musculus	88.43	0.00e+00	866.00
IUUC-Ocu-073826	Oryctolagus cuniculus	63.25	1.00e-149	523.00
IUUC-Sha-106708	Sarcophilus harrisii	42.65	6.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence