iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048501

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01097465

Gene Name

GNB3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000015586.2	ENSSTOT00000015588.2	ENSSTOP00000013951.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-39	131.0	53	88
UBD/Beta-Prp	1.20e-51	175.7	48	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++++++++ +d +llvs+s Dg++ vWD+ t +
   Q: 53   GHLAKIYAMHWaTDsKLLVSASQDGKLIVWDTYTTN 88
           899*********888****************87765 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.. 131
            r+l gh a+++a+ +  d+k+lv++s+D+ + vwd  t   vh++   ++ v+++++ psg++++ G+ d++  ++ l++++   +  
   Q: 48   RRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKvs 136
           4799***************************************************************************9998777777 PP
   S: 132  .tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
             ls h+g  +c ++ + +n +v++s D+t+ lWd++tg+  + + g ht++  sl+++++ k ++sg++d + klwd+++g+c +t++
   Q: 137  rELSAHTGYLSCCRFLD-DNNIVTSSGDTTCALWDVETGQQKTVFVG-HTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFT 223
           8***************9.566899**********************9.***************************************** PP
   S: 220  ghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhns 265
           gh++ ++ + f+pn+e + +gs+D s r++dlr ++ l+++++  +
   Q: 224  GHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTNYSH--E 267
           ************************************9998877..3 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MGEMEQLRQE AEQLKKQIAD ARKACADTTL AELVSGLEVV GRVQLRTRRT LRGHLAKIYA 60
MHWATDSKLL VSASQDGKLI VWDTYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCCCCCA GTCCCTGCCA GCTGATTTCA TTTGCCTGAG TTGTTGGTTG TTGTCATTGG 60
CCCTACCCTT CCCTGTCAGT CTCCCCCCCC ACACCCAGCA CAGTCAGGGC CAGGCCAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030425--C:dendrite
GO:0070062--C:extracellular exosome
GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	50.00	5.00e-75	274.00
IUUC-Aml-002370	Ailuropoda melanoleuca	97.35	0.00e+00	691.00
IUUC-Atr-002610	Amborella trichopoda	49.68	2.00e-86	312.00
IUUC-Apl-004079	Anas platyrhynchos	92.94	0.00e+00	671.00
IUUC-Aca-004539	Anolis carolinensis	90.00	0.00e+00	652.00
IUUC-Aly-006025	Arabidopsis lyrata	50.96	1.00e-83	302.00
IUUC-Ath-006617	Arabidopsis thaliana	51.61	2.00e-83	301.00
IUUC-Bgr-012079	Blumeria graminis	65.09	1.00e-131	462.00
IUUC-Bta-012810	Bos taurus	97.65	0.00e+00	694.00
IUUC-Bci-013621	Botrytis cinerea	66.37	1.00e-131	462.00
IUUC-Bdi-014785	Brachypodium distachyon	50.00	2.00e-86	311.00
IUUC-Bol-015759	Brassica oleracea	51.76	2.00e-81	296.00
IUUC-Cja-019894	Callithrix jacchus	96.47	0.00e+00	684.00
IUUC-Cfa-020140	Canis familiaris	96.76	0.00e+00	685.00
IUUC-Cpo-021908	Cavia porcellus	97.94	0.00e+00	696.00
IUUC-Csa-023321	Chlorocebus sabaeus	96.18	0.00e+00	681.00
IUUC-Cne-026811	Cryptococcus neoformans	66.37	1.00e-138	485.00
IUUC-Dno-029783	Dasypus novemcinctus	95.18	3.00e-180	623.00
IUUC-Dse-031388	Dothistroma septosporum	66.37	3.00e-137	480.00
IUUC-Ete-032435	Echinops telfairi	89.41	3.00e-178	617.00
IUUC-Eca-034169	Equus caballus	97.65	0.00e+00	691.00
IUUC-Eeu-034631	Erinaceus europaeus	90.58	2.00e-164	571.00
IUUC-Fca-035392	Felis catus	96.76	0.00e+00	687.00
IUUC-Fal-036902	Ficedula albicollis	91.47	0.00e+00	666.00
IUUC-Gga-040655	Gallus gallus	91.50	0.00e+00	655.00
IUUC-Ggo-045346	Gorilla gorilla	96.18	0.00e+00	681.00
IUUC-Hsa-046203	Homo sapiens	96.18	0.00e+00	681.00
IUUC-Hvu-047596	Hordeum vulgare	50.00	3.00e-85	308.00
IUUC-Kpa-049192	Komagataella pastoris	38.33	2.00e-62	232.00
IUUC-Lpe-051040	Leersia perrieri	49.68	7.00e-87	313.00
IUUC-Loc-052327	Lepisosteus oculatus	86.47	0.00e+00	634.00
IUUC-Laf-053616	Loxodonta africana	96.47	0.00e+00	687.00
IUUC-Mcc-055798	Macaca mulatta	96.18	0.00e+00	681.00
IUUC-Mga-059516	Meleagris gallopavo	92.94	0.00e+00	670.00
IUUC-Mmr-061701	Microcebus murinus	97.35	0.00e+00	688.00
IUUC-Mdo-061879	Monodelphis domestica	93.53	0.00e+00	670.00
IUUC-Mmu-063132	Mus musculus	97.94	0.00e+00	692.00
IUUC-Mac-064871	Musa acuminata	49.36	6.00e-84	303.00
IUUC-Mpu-066365	Mustela putorius furo	97.06	0.00e+00	693.00
IUUC-Mlu-067628	Myotis lucifugus	96.47	0.00e+00	683.00
IUUC-Nle-069015	Nomascus leucogenys	94.71	0.00e+00	665.00
IUUC-Opr-070261	Ochotona princeps	97.94	0.00e+00	694.00
IUUC-Ocu-074255	Oryctolagus cuniculus	97.94	0.00e+00	693.00
IUUC-Oba-075818	Oryza barthii	48.00	7.00e-84	303.00
IUUC-Obr-076229	Oryza brachyantha	49.36	5.00e-84	304.00
IUUC-Ogl-077730	Oryza glaberrima	50.00	3.00e-87	315.00
IUUC-Ogu-078583	Oryza glumaepatula	49.62	7.00e-69	253.00
IUUC-Oin-079661	Oryza indica	49.36	6.00e-84	303.00
IUUC-Olo-080225	Oryza longistaminata	49.62	7.00e-69	253.00
IUUC-Oni-082161	Oryza nivara	49.68	8.00e-87	313.00
IUUC-Opu-084072	Oryza punctata	50.00	3.00e-87	315.00
IUUC-Oru-084316	Oryza rufipogon	49.36	6.00e-84	303.00
IUUC-Osa-085380	Oryza sativa	49.36	6.00e-84	303.00
IUUC-Oga-088685	Otolemur garnettii	97.94	0.00e+00	693.00
IUUC-Oar-089373	Ovis aries	94.43	0.00e+00	658.00
IUUC-Ptr-090627	Pan troglodytes	93.53	0.00e+00	661.00
IUUC-Pan-092347	Papio anubis	96.17	0.00e+00	680.00
IUUC-Psi-092965	Pelodiscus sinensis	92.94	0.00e+00	671.00
IUUC-Ppa-095726	Physcomitrella patens	45.58	8.00e-76	276.00
IUUC-Pab-098335	Pongo abelii	95.59	0.00e+00	679.00
IUUC-Pop-099370	Populus trichocarpa	49.35	5.00e-87	314.00
IUUC-Ppe-102016	Prunus persica	43.79	7.00e-85	306.00
IUUC-Pva-102666	Pteropus vampyrus	97.65	0.00e+00	689.00
IUUC-Rno-105834	Rattus norvegicus	97.94	0.00e+00	659.00
IUUC-Sce-106298	Saccharomyces cerevisiae	36.13	3.00e-66	245.00
IUUC-Sha-107128	Sarcophilus harrisii	94.12	0.00e+00	671.00
IUUC-Ssl-108539	Sclerotinia sclerotiorum	66.86	9.00e-132	462.00
IUUC-Smo-109652	Selaginella moellendorffii	44.54	5.00e-75	274.00
IUUC-Sit-110441	Setaria italica	49.68	1.00e-86	312.00
IUUC-Sly-111784	Solanum lycopersicum	49.35	2.00e-84	305.00
IUUC-Stu-112400	Solanum tuberosum	49.35	2.00e-84	305.00
IUUC-Sbi-114038	Sorghum bicolor	49.04	2.00e-85	308.00
IUUC-Ssc-115886	Sus scrofa	97.94	0.00e+00	694.00
IUUC-Tgu-116461	Taeniopygia guttata	92.06	0.00e+00	669.00
IUUC-Tca-121224	Theobroma cacao	49.68	3.00e-87	315.00
IUUC-Tae-125653	Triticum aestivum	50.32	2.00e-85	308.00
IUUC-Tur-126755	Triticum urartu	49.84	7.00e-86	312.00
IUUC-Tbe-127694	Tupaia belangeri	80.59	2.00e-148	517.00
IUUC-Vvi-131162	Vitis vinifera	49.68	2.00e-86	312.00
IUUC-Xtr-132928	Xenopus tropicalis	88.24	8.00e-179	619.00
IUUC-Yli-134396	Yarrowia lipolytica	32.49	4.00e-62	231.00
IUUC-Zma-135893	Zea mays	49.04	2.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence