iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107952

Ensembl Protein ID

EEB06398

UniProt Accession

B6JXY0; B6JXY0_SCHJY

Genbank Protein ID

EEB06398.1

Protein Name

Splicing factor Spf38

Genbank Nucleotide ID

KE651168

Gene Name

SJAG_05235

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_05235	EEB06398	EEB06398

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-27	92.7	257	287
UBD/Beta-Prp	7.90e-45	151.3	166	324

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+   t+ a+ +d  l++sGs D +++vWD
   Q: 257  GHEHCLTGAAWnHDaSLIASGSADRSVYVWD 287
           89999******98899**************9 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls........tgkcvhtlkghedsvlsls 101
           +k ++t+v++s+++s ++tg  +g i  wd+++ + l +l + ++ +t++ +spdg  l++ s+D +++ ++++         ++ + +++ghe+ ++  +
   Q: 166  QKYPLTAVAVSKQGSTVFTGDVSGQIVAWDLRSSQPLYTLNDSSDIITSLAISPDGTRLLSNSRDSIVRTFNIQpfapatrlLNTATGAMQGHEHCLTGAA 266
           6779999****************************************************************99999999998889999999********** PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtv 161
           ++ + + ++sGs+dr + vwd e + +++  l gh+g+v++v +hp+ n + s+s+D+t+
   Q: 267  WNHDASLIASGSADRSVYVWDDEGQLKYQ--LPGHEGSVTHVDFHPQRNAILSCSTDKTI 324
           ***99***************999888887..9**************************99 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MDKRRQVTRA GTTQLVKRAK YDHSAVENDT SSNLQMLGHT DEVLVVRFSP SGSYFASAGV 60
DKQLFLWDVD HGCSNFGLIK GSKGAILDLQ WSRDSSSVYT CGSDYIVSTW DVNTGKRACK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAGACGCG TCAATACCGC TCTTTTTACT CACCAACAGA GAACGTTACA AAAAGGTGAA 60
TACGAAACGG AAACCAAATA CATTTGAACT ATGGACAAAC GTCGGCAAGT AACTCGCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071014--C:post-mRNA release spliceosomal complex
GO:0005682--C:U5 snRNP

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	38.05	1.00e-62	231.00
IUUC-Aml-001428	Ailuropoda melanoleuca	37.77	2.00e-54	203.00
IUUC-Atr-003164	Amborella trichopoda	37.25	7.00e-63	231.00
IUUC-Apl-003447	Anas platyrhynchos	38.25	6.00e-57	211.00
IUUC-Aca-004270	Anolis carolinensis	34.78	1.00e-56	211.00
IUUC-Aly-005659	Arabidopsis lyrata	38.38	2.00e-63	233.00
IUUC-Ath-006764	Arabidopsis thaliana	38.72	3.00e-63	233.00
IUUC-Acl-008324	Aspergillus clavatus	43.29	2.00e-77	280.00
IUUC-Afl-008607	Aspergillus flavus	43.29	8.00e-77	278.00
IUUC-Afu-008998	Aspergillus fumigatus	43.96	8.00e-78	281.00
IUUC-Ani-009363	Aspergillus nidulans	41.95	7.00e-76	275.00
IUUC-Ang-009513	Aspergillus niger	43.05	4.00e-70	256.00
IUUC-Aor-010237	Aspergillus oryzae	43.29	4.00e-77	279.00
IUUC-Ate-010374	Aspergillus terreus	40.62	9.00e-69	251.00
IUUC-Ame-010728	Astyanax mexicanus	37.03	1.00e-57	214.00
IUUC-Bgr-012297	Blumeria graminis	42.49	1.00e-61	227.00
IUUC-Bta-012433	Bos taurus	38.26	1.00e-59	221.00
IUUC-Bci-013763	Botrytis cinerea	41.14	2.00e-72	264.00
IUUC-Bdi-014490	Brachypodium distachyon	37.71	5.00e-62	229.00
IUUC-Bol-016479	Brassica oleracea	39.39	3.00e-64	236.00
IUUC-Bra-017219	Brassica rapa	39.39	5.00e-64	236.00
IUUC-Cel-018512	Caenorhabditis elegans	37.12	3.00e-63	233.00
IUUC-Cja-019308	Callithrix jacchus	37.92	2.00e-59	220.00
IUUC-Cfa-020998	Canis familiaris	38.26	1.00e-59	221.00
IUUC-Cpo-021580	Cavia porcellus	38.26	9.00e-60	221.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	38.64	2.00e-62	230.00
IUUC-Csa-023456	Chlorocebus sabaeus	37.92	2.00e-59	220.00
IUUC-Cho-024644	Choloepus hoffmanni	38.59	5.00e-60	222.00
IUUC-Cin-025463	Ciona intestinalis	41.14	4.00e-66	243.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	41.81	2.00e-73	267.00
IUUC-Cne-026780	Cryptococcus neoformans	37.21	2.00e-50	191.00
IUUC-Dre-027671	Danio rerio	37.91	3.00e-62	229.00
IUUC-Dno-029769	Dasypus novemcinctus	38.26	1.00e-59	221.00
IUUC-Dse-031316	Dothistroma septosporum	41.50	8.00e-77	278.00
IUUC-Dme-031756	Drosophila melanogaster	36.36	2.00e-64	237.00
IUUC-Ete-032753	Echinops telfairi	36.58	3.00e-53	200.00
IUUC-Eca-033979	Equus caballus	38.26	1.00e-59	221.00
IUUC-Eeu-034862	Erinaceus europaeus	43.88	1.00e-26	111.00
IUUC-Fca-036110	Felis catus	35.89	2.00e-44	171.00
IUUC-Fal-037648	Ficedula albicollis	37.92	4.00e-59	219.00
IUUC-Fox-037861	Fusarium oxysporum	42.14	6.00e-76	275.00
IUUC-Fso-038405	Fusarium solani	41.47	1.00e-73	268.00
IUUC-Gmo-039383	Gadus morhua	38.24	2.00e-58	217.00
IUUC-Ggr-040082	Gaeumannomyces graminis	37.61	1.00e-69	254.00
IUUC-Gga-040785	Gallus gallus	37.92	4.00e-59	219.00
IUUC-Gac-041645	Gasterosteus aculeatus	36.60	6.00e-56	209.00
IUUC-Gma-044329	Glycine max	38.33	1.00e-63	234.00
IUUC-Ggo-044800	Gorilla gorilla	33.57	1.00e-41	161.00
IUUC-Hsa-045918	Homo sapiens	37.92	2.00e-59	220.00
IUUC-Hvu-047342	Hordeum vulgare	38.05	3.00e-62	229.00
IUUC-Kpa-049149	Komagataella pastoris	32.62	1.00e-37	147.00
IUUC-Lch-050395	Latimeria chalumnae	35.16	2.00e-63	234.00
IUUC-Lpe-051275	Leersia perrieri	38.38	4.00e-63	233.00
IUUC-Loc-052666	Lepisosteus oculatus	38.89	2.00e-56	210.00
IUUC-Lma-053129	Leptosphaeria maculans	39.09	1.00e-73	267.00
IUUC-Laf-054512	Loxodonta africana	38.26	1.00e-59	221.00
IUUC-Mcc-055819	Macaca mulatta	37.92	3.00e-59	220.00
IUUC-Meu-056350	Macropus eugenii	34.23	3.00e-46	177.00
IUUC-Mor-057063	Magnaporthe oryzae	37.25	3.00e-72	263.00
IUUC-Mpo-057369	Magnaporthe poae	40.13	3.00e-68	249.00
IUUC-Mtr-058228	Medicago truncatula	38.05	3.00e-63	233.00
IUUC-Mla-059093	Melampsora laricipopulina	37.42	3.00e-53	200.00
IUUC-Mga-059719	Meleagris gallopavo	37.92	3.00e-59	219.00
IUUC-Mvi-060285	Microbotryum violaceum	32.48	6.00e-45	172.00
IUUC-Mmr-061685	Microcebus murinus	36.58	2.00e-52	197.00
IUUC-Mdo-062121	Monodelphis domestica	38.26	5.00e-59	219.00
IUUC-Mmu-063216	Mus musculus	38.26	1.00e-59	221.00
IUUC-Mac-065463	Musa acuminata	35.67	2.00e-56	210.00
IUUC-Mpu-066390	Mustela putorius furo	38.26	1.00e-59	221.00
IUUC-Mlu-067686	Myotis lucifugus	37.70	4.00e-56	209.00
IUUC-Nfi-068509	Neosartorya fischeri	43.29	2.00e-77	280.00
IUUC-Ncr-068870	Neurospora crassa	40.47	8.00e-72	261.00
IUUC-Nle-069539	Nomascus leucogenys	37.92	3.00e-59	220.00
IUUC-Opr-070555	Ochotona princeps	32.89	8.00e-50	188.00
IUUC-Ont-071490	Oreochromis niloticus	36.99	2.00e-54	204.00
IUUC-Oan-073044	Ornithorhynchus anatinus	36.33	3.00e-44	170.00
IUUC-Ocu-073764	Oryctolagus cuniculus	38.26	1.00e-59	221.00
IUUC-Oba-075704	Oryza barthii	38.05	2.00e-63	233.00
IUUC-Obr-076455	Oryza brachyantha	38.38	5.00e-63	233.00
IUUC-Ogl-077382	Oryza glaberrima	38.57	3.00e-63	233.00
IUUC-Ogu-078739	Oryza glumaepatula	38.38	2.00e-63	234.00
IUUC-Oin-079072	Oryza indica	38.38	2.00e-63	234.00
IUUC-Olo-080809	Oryza longistaminata	38.38	2.00e-63	234.00
IUUC-Ome-081677	Oryza meridionalis	38.38	1.00e-63	234.00
IUUC-Oni-082937	Oryza nivara	38.38	2.00e-63	234.00
IUUC-Opu-083510	Oryza punctata	38.38	2.00e-63	234.00
IUUC-Oru-084360	Oryza rufipogon	38.38	2.00e-63	234.00
IUUC-Osa-085640	Oryza sativa	38.38	2.00e-63	234.00
IUUC-Ola-086504	Oryzias latipes	37.92	2.00e-58	217.00
IUUC-Olu-087869	Ostreococcus lucimarinus	35.79	7.00e-43	165.00
IUUC-Oga-088773	Otolemur garnettii	38.59	4.00e-60	223.00
IUUC-Oar-089677	Ovis aries	37.87	4.00e-58	216.00
IUUC-Ptr-090724	Pan troglodytes	37.10	7.00e-54	202.00
IUUC-Pan-092683	Papio anubis	37.92	2.00e-59	220.00
IUUC-Psi-093415	Pelodiscus sinensis	38.26	1.00e-59	221.00
IUUC-Pma-094562	Petromyzon marinus	39.26	3.00e-68	249.00
IUUC-Pno-095014	Phaeosphaeria nodorum	38.71	2.00e-71	261.00
IUUC-Ppa-095822	Physcomitrella patens	39.06	2.00e-62	230.00
IUUC-Pfo-096579	Poecilia formosa	37.25	3.00e-57	213.00
IUUC-Pab-098313	Pongo abelii	37.92	2.00e-59	220.00
IUUC-Pop-099747	Populus trichocarpa	38.38	2.00e-63	233.00
IUUC-Pca-100871	Procavia capensis	34.64	1.00e-44	171.00
IUUC-Ppe-101389	Prunus persica	39.33	5.00e-65	239.00
IUUC-Pva-102468	Pteropus vampyrus	31.97	6.00e-42	162.00
IUUC-Pgr-103523	Puccinia graminis	36.77	5.00e-55	206.00
IUUC-Ptt-103930	Puccinia triticina	36.45	1.00e-54	204.00
IUUC-Pte-104299	Pyrenophora teres	38.70	1.00e-73	268.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	39.27	1.00e-74	271.00
IUUC-Rno-105796	Rattus norvegicus	38.26	3.00e-59	220.00
IUUC-Sha-107191	Sarcophilus harrisii	38.26	5.00e-59	219.00
IUUC-Spo-108249	Schizosaccharomyces pombe	51.62	2.00e-102	363.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	41.14	2.00e-72	263.00
IUUC-Sit-110805	Setaria italica	38.72	1.00e-63	235.00
IUUC-Sly-111567	Solanum lycopersicum	37.04	5.00e-63	232.00
IUUC-Stu-112562	Solanum tuberosum	37.04	2.00e-63	233.00
IUUC-Sar-112991	Sorex araneus	36.45	1.00e-37	147.00
IUUC-Sbi-114010	Sorghum bicolor	38.72	7.00e-64	235.00
IUUC-Sre-114947	Sporisorium reilianum	34.88	9.00e-52	195.00
IUUC-Ssc-115371	Sus scrofa	38.26	1.00e-59	221.00
IUUC-Tgu-117429	Taeniopygia guttata	36.91	2.00e-59	220.00
IUUC-Tru-118081	Takifugu rubripes	37.58	3.00e-57	213.00
IUUC-Tsy-119101	Tarsius syrichta	34.90	3.00e-49	186.00
IUUC-Tni-120532	Tetraodon nigroviridis	37.92	1.00e-57	214.00
IUUC-Tca-121373	Theobroma cacao	37.71	4.00e-63	232.00
IUUC-Tre-122050	Trichoderma reesei	40.47	2.00e-73	266.00
IUUC-Tvi-122394	Trichoderma virens	38.06	9.00e-68	248.00
IUUC-Tae-122689	Triticum aestivum	37.05	5.00e-62	229.00
IUUC-Tme-126998	Tuber melanosporum	43.81	1.00e-70	258.00
IUUC-Tbe-128032	Tupaia belangeri	38.59	6.00e-60	222.00
IUUC-Ttr-129102	Tursiops truncatus	35.63	3.00e-43	166.00
IUUC-Uma-129363	Ustilago maydis	36.27	1.00e-52	197.00
IUUC-Vda-129891	Verticillium dahliae	41.47	3.00e-73	266.00
IUUC-Vpa-130827	Vicugna pacos	38.59	5.00e-60	222.00
IUUC-Vvi-131202	Vitis vinifera	37.33	8.00e-63	231.00
IUUC-Xtr-132769	Xenopus tropicalis	36.33	2.00e-55	207.00
IUUC-Xma-133147	Xiphophorus maculatus	36.91	1.00e-56	211.00
IUUC-Yli-134352	Yarrowia lipolytica	32.82	6.00e-28	115.00
IUUC-Zma-135294	Zea mays	38.72	5.00e-64	235.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence