iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075395

Ensembl Protein ID

OBART08G10030.1

UniProt Accession

A0A0D3GYS2; A0A0D3GYS2_9ORYZ

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART08G10030	OBART08G10030.1	OBART08G10030.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-26	90.8	50	87
UBD/Beta-Prp	7.50e-41	141.2	6	290

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v++++   d t+l++Gs D t k+WD+ tg+ l
   Q: 50   GHNGAVWSCDVsRDsTRLITGSADQTAKLWDVQTGREL 87
           8***********777*******************9876 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.......... 131
           ++ghe + t +++++dg++l ++++D+t +vw  ++g+ + t++gh+  v+s+++s+++ +l++Gs+d+t+++wd++tg +l +          
   Q: 6    MKGHERPLTFLRYNRDGDLLFSCAKDHTPNVWFADNGDRLGTYRGHNGAVWSCDVSRDSTRLITGSADQTAKLWDVQTGRELFTfrfdaparsv 99
           489********************************************************************************9********** PP
   S: 132  .........................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl...tgghtd 181
                                                    + +g +g +n +v+ p ++ +++++ D t+r+Wd +tg++l++    + gh++
   Q: 100  efaigdglavittdnfmenvptaqvkriaedpddqseesllVITGIKGRINRAVWGPLNRTIITAGEDATIRIWDTETGQCLKESdkeQ-GHQK 192
           **************************************************************************************955.5*** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgec..........................vrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
            ++sls + +  ++++gsld++ klwd +t +                           +  ++gh  +++ ++f p++  + sg++Dg +r++
   Q: 193  TITSLSKSADWSHFLTGSLDKSAKLWDTRTLTLiktyvterpvnavdisplldhilqeeIGGVKGHFGPINALAFNPDGRSFSSGGEDGYVRLH 286
           *****************************77773333333344555555555555555555555555*************************98 PP
   S: 250  dlrs 253
             +s
   Q: 287  HFDS 290
           4444 PP

Organism

Oryza barthii

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPNVWFAD NGDRLGTYRG HNGAVWSCDV 60
SRDSTRLITG SADQTAKLWD VQTGRELFTF RFDAPARSVE FAIGDGLAVI TTDNFMENVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCGA TCCTGATGAA GGGGCACGAG CGCCCGCTCA CGTTCCTCCG GTACAACCGC 60
GACGGGGACC TCCTCTTCTC CTGCGCCAAG GACCACACCC CCAACGTCTG GTTCGCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	68.93	1.00e-64	239.00
IUUC-Aml-001321	Ailuropoda melanoleuca	39.38	4.00e-68	250.00
IUUC-Apl-003841	Anas platyrhynchos	39.38	5.00e-69	253.00
IUUC-Aca-005123	Anolis carolinensis	38.96	1.00e-70	258.00
IUUC-Aly-005473	Arabidopsis lyrata	71.65	2.00e-137	480.00
IUUC-Ath-007094	Arabidopsis thaliana	70.73	9.00e-136	475.00
IUUC-Ago-008000	Ashbya gossypii	35.40	1.00e-56	213.00
IUUC-Acl-008098	Aspergillus clavatus	39.27	3.00e-62	231.00
IUUC-Afl-008494	Aspergillus flavus	40.06	8.00e-66	243.00
IUUC-Afu-009080	Aspergillus fumigatus	38.37	5.00e-61	227.00
IUUC-Ani-009230	Aspergillus nidulans	40.67	5.00e-65	240.00
IUUC-Aor-010114	Aspergillus oryzae	40.06	8.00e-66	243.00
IUUC-Ate-010285	Aspergillus terreus	39.14	5.00e-63	233.00
IUUC-Ame-011534	Astyanax mexicanus	40.12	1.00e-70	259.00
IUUC-Bgr-012121	Blumeria graminis	37.35	4.00e-58	217.00
IUUC-Bta-013143	Bos taurus	39.57	7.00e-69	253.00
IUUC-Bci-013950	Botrytis cinerea	40.37	2.00e-65	242.00
IUUC-Bdi-015019	Brachypodium distachyon	80.98	6.00e-154	536.00
IUUC-Bol-015709	Brassica oleracea	71.21	9.00e-137	479.00
IUUC-Bra-017760	Brassica rapa	71.21	3.00e-138	484.00
IUUC-Cel-018226	Caenorhabditis elegans	35.09	9.00e-57	213.00
IUUC-Cja-019741	Callithrix jacchus	39.26	1.00e-68	252.00
IUUC-Cfa-021204	Canis familiaris	39.08	8.00e-68	249.00
IUUC-Cpo-021661	Cavia porcellus	39.08	6.00e-68	250.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	46.63	3.00e-86	311.00
IUUC-Csa-024038	Chlorocebus sabaeus	39.26	1.00e-68	252.00
IUUC-Cin-025597	Ciona intestinalis	42.94	2.00e-74	271.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	39.02	8.00e-62	229.00
IUUC-Cne-026838	Cryptococcus neoformans	36.78	7.00e-60	223.00
IUUC-Cme-027304	Cyanidioschyzon merolae	48.46	2.00e-82	298.00
IUUC-Dre-028567	Danio rerio	39.26	2.00e-71	261.00
IUUC-Dno-029171	Dasypus novemcinctus	39.38	1.00e-67	249.00
IUUC-Dor-030257	Dipodomys ordii	31.82	2.00e-25	109.00
IUUC-Dse-031191	Dothistroma septosporum	37.99	2.00e-63	235.00
IUUC-Dme-031879	Drosophila melanogaster	42.11	6.00e-73	266.00
IUUC-Eca-033259	Equus caballus	39.08	1.00e-67	249.00
IUUC-Fca-036489	Felis catus	39.08	1.00e-67	249.00
IUUC-Fal-037485	Ficedula albicollis	39.08	8.00e-69	253.00
IUUC-Fox-037860	Fusarium oxysporum	39.08	1.00e-62	232.00
IUUC-Fso-038188	Fusarium solani	39.08	6.00e-62	230.00
IUUC-Gmo-039311	Gadus morhua	38.77	5.00e-69	253.00
IUUC-Ggr-040045	Gaeumannomyces graminis	39.88	3.00e-63	234.00
IUUC-Gga-040645	Gallus gallus	38.62	1.00e-67	248.00
IUUC-Gac-042086	Gasterosteus aculeatus	39.69	8.00e-70	256.00
IUUC-Gma-043246	Glycine max	76.69	7.00e-147	512.00
IUUC-Ggo-045578	Gorilla gorilla	39.26	1.00e-68	252.00
IUUC-Hsa-046734	Homo sapiens	39.26	1.00e-68	252.00
IUUC-Hvu-047553	Hordeum vulgare	81.29	2.00e-154	537.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	39.08	2.00e-67	248.00
IUUC-Kpa-049325	Komagataella pastoris	40.37	7.00e-65	240.00
IUUC-Lch-049620	Latimeria chalumnae	38.87	6.00e-62	230.00
IUUC-Lpe-051338	Leersia perrieri	84.57	2.00e-154	537.00
IUUC-Loc-052094	Lepisosteus oculatus	39.51	2.00e-69	255.00
IUUC-Lma-053047	Leptosphaeria maculans	41.10	6.00e-67	247.00
IUUC-Laf-053801	Loxodonta africana	39.18	2.00e-65	242.00
IUUC-Mor-057025	Magnaporthe oryzae	39.38	5.00e-61	227.00
IUUC-Mpo-057511	Magnaporthe poae	41.59	1.00e-63	236.00
IUUC-Mtr-058051	Medicago truncatula	76.07	1.00e-146	511.00
IUUC-Mla-059061	Melampsora laricipopulina	39.57	4.00e-66	244.00
IUUC-Mga-059229	Meleagris gallopavo	38.84	1.00e-66	245.00
IUUC-Mvi-060399	Microbotryum violaceum	38.99	2.00e-62	231.00
IUUC-Mmr-060764	Microcebus murinus	39.57	3.00e-69	254.00
IUUC-Mdo-062088	Monodelphis domestica	39.14	1.00e-68	252.00
IUUC-Mmu-064304	Mus musculus	39.26	7.00e-69	253.00
IUUC-Mac-065520	Musa acuminata	75.08	4.00e-142	496.00
IUUC-Mpu-066340	Mustela putorius furo	39.08	1.00e-67	249.00
IUUC-Mlu-067111	Myotis lucifugus	39.38	3.00e-68	251.00
IUUC-Nfi-068478	Neosartorya fischeri	38.67	5.00e-62	230.00
IUUC-Ncr-068820	Neurospora crassa	40.62	3.00e-63	234.00
IUUC-Nle-069903	Nomascus leucogenys	39.08	5.00e-68	250.00
IUUC-Opr-070221	Ochotona princeps	38.34	6.00e-66	243.00
IUUC-Ont-071765	Oreochromis niloticus	39.88	1.00e-71	262.00
IUUC-Ocu-074039	Oryctolagus cuniculus	39.08	7.00e-68	249.00
IUUC-Obr-076334	Oryza brachyantha	84.66	6.00e-159	552.00
IUUC-Ogl-077751	Oryza glaberrima	91.10	4.00e-173	599.00
IUUC-Ogu-078010	Oryza glumaepatula	100.00	2.00e-177	613.00
IUUC-Oin-079878	Oryza indica	88.96	1.00e-168	584.00
IUUC-Ome-081228	Oryza meridionalis	67.50	1.00e-114	405.00
IUUC-Oni-082411	Oryza nivara	96.63	1.00e-169	587.00
IUUC-Opu-083136	Oryza punctata	90.80	1.00e-172	598.00
IUUC-Oru-084916	Oryza rufipogon	86.57	8.00e-167	578.00
IUUC-Osa-085776	Oryza sativa	91.10	4.00e-173	599.00
IUUC-Ola-087053	Oryzias latipes	39.88	3.00e-70	257.00
IUUC-Olu-087602	Ostreococcus lucimarinus	54.91	2.00e-99	354.00
IUUC-Oga-088154	Otolemur garnettii	39.38	1.00e-68	252.00
IUUC-Oar-089915	Ovis aries	39.38	4.00e-68	250.00
IUUC-Pan-092035	Papio anubis	39.26	1.00e-68	252.00
IUUC-Pno-094988	Phaeosphaeria nodorum	37.54	1.00e-56	212.00
IUUC-Ppa-095949	Physcomitrella patens	69.02	4.00e-133	466.00
IUUC-Pfo-096101	Poecilia formosa	38.96	5.00e-70	257.00
IUUC-Pab-097726	Pongo abelii	39.26	1.00e-68	252.00
IUUC-Pop-099617	Populus trichocarpa	72.70	1.00e-139	488.00
IUUC-Pca-101014	Procavia capensis	39.57	5.00e-69	253.00
IUUC-Ppe-101320	Prunus persica	75.77	5.00e-145	506.00
IUUC-Pva-102789	Pteropus vampyrus	36.50	3.00e-57	214.00
IUUC-Pgr-103479	Puccinia graminis	40.18	4.00e-67	247.00
IUUC-Ptt-103981	Puccinia triticina	40.18	9.00e-68	249.00
IUUC-Pte-104278	Pyrenophora teres	39.69	5.00e-64	237.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	39.69	5.00e-64	237.00
IUUC-Rno-105867	Rattus norvegicus	35.35	1.00e-53	202.00
IUUC-Sce-106251	Saccharomyces cerevisiae	36.45	2.00e-58	219.00
IUUC-Sha-107039	Sarcophilus harrisii	39.14	1.00e-68	252.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	38.65	7.00e-66	243.00
IUUC-Spo-108314	Schizosaccharomyces pombe	41.10	4.00e-72	263.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	40.06	3.00e-65	241.00
IUUC-Smo-108728	Selaginella moellendorffii	66.15	3.00e-125	440.00
IUUC-Sit-110801	Setaria italica	83.74	2.00e-159	554.00
IUUC-Sly-111326	Solanum lycopersicum	72.39	3.00e-139	487.00
IUUC-Stu-112458	Solanum tuberosum	74.23	2.00e-141	494.00
IUUC-Sbi-114063	Sorghum bicolor	81.90	8.00e-157	545.00
IUUC-Sre-115096	Sporisorium reilianum	39.10	3.00e-59	221.00
IUUC-Ssc-116080	Sus scrofa	39.57	6.00e-69	253.00
IUUC-Tgu-116988	Taeniopygia guttata	39.08	8.00e-69	253.00
IUUC-Tru-118766	Takifugu rubripes	40.00	1.00e-70	259.00
IUUC-Tni-120197	Tetraodon nigroviridis	39.57	7.00e-71	259.00
IUUC-Tca-121316	Theobroma cacao	76.69	8.00e-146	508.00
IUUC-Tre-122097	Trichoderma reesei	40.61	2.00e-62	232.00
IUUC-Tvi-122442	Trichoderma virens	39.94	1.00e-61	229.00
IUUC-Tae-125800	Triticum aestivum	80.98	5.00e-154	536.00
IUUC-Tme-127038	Tuber melanosporum	40.37	2.00e-67	248.00
IUUC-Uma-129464	Ustilago maydis	39.40	4.00e-59	221.00
IUUC-Vda-129841	Verticillium dahliae	39.57	1.00e-61	229.00
IUUC-Vvi-131076	Vitis vinifera	74.85	3.00e-145	506.00
IUUC-Xtr-132395	Xenopus tropicalis	40.80	8.00e-71	259.00
IUUC-Xma-133383	Xiphophorus maculatus	38.96	6.00e-70	256.00
IUUC-Yli-134586	Yarrowia lipolytica	38.79	6.00e-52	197.00
IUUC-Zma-135904	Zea mays	82.82	5.00e-159	552.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence