iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ogl-077060

UUCD1 version

UUC-OrG-02038

Ensembl Protein ID

ORGLA05G0079200.1

UniProt Accession

I1PTU4; I1PTU4_ORYGL

Protein Name

Eukaryotic translation initiation factor 3 subunit I

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORGLA05G0079200	ORGLA05G0079200.1	ORGLA05G0079200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-25	87.7	50	85
UBD/Beta-Prp	7.50e-41	140.9	6	256

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH++ v++++   d t+l++Gs D t k+WD+ tg 
   Q: 50   GHNGAVWSCDVsRDsTRLITGSADQTAKLWDVQTGA 85
           8***********777*****************9986 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee........ 131
           ++ghe + t +++++dg++l ++++D+t +vw  ++g+ + t++gh+  v+s+++s+++ +l++Gs+d+t+++wd++tg +l +        
   Q: 6    MKGHERPLTFLRYNRDGDLLFSCAKDHTPNVWFADNGDRLGTYSGHNGAVWSCDVSRDSTRLITGSADQTAKLWDVQTGAELFTfrfdapar 97
           489*******************************************************************************99******** PP
   S: 132  .............................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..t 176
                                                        + sg +g +n +v+ p ++ +++++ D t+r+Wd +tg++l +   +
   Q: 98   svefaigdglavittdnfmgnvptaqvkriaddpddheeseesllVISGIKGRINRAVWGPLNRTIITAGEDATIRIWDTETGTCLMQSdnE 189
           **************************************************************************************999995 PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs.sD 243
           +gh++ ++sls + +  ++++gsld++ klwd +t + ++t+    ++v+ v+ sp  +++v g+ +D
   Q: 190  QGHQKTITSLSKSADWSHFLTGSLDKSAKLWDTRTLTLIKTYVTE-RPVNAVDISPLLDHVVIGGgQD 256
           55***************************************9875.4666666665444444443144 PP

Organism

Oryza glaberrima

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPNVWFAD NGDRLGTYSG HNGAVWSCDV 60
SRDSTRLITG SADQTAKLWD VQTGAELFTF RFDAPARSVE FAIGDGLAVI TTDNFMGNVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCGA TCCTGATGAA GGGGCACGAG CGGCCGCTGA CATTCCTCCG GTACAACCGC 60
GACGGGGACC TCCTCTTCTC GTGCGCCAAG GACCACACCC CCAACGTCTG GTTCGCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001321	Ailuropoda melanoleuca	46.32	3.00e-85	307.00
IUUC-Apl-003841	Anas platyrhynchos	46.63	5.00e-86	310.00
IUUC-Aca-005123	Anolis carolinensis	46.48	6.00e-88	316.00
IUUC-Afu-009080	Aspergillus fumigatus	43.98	9.00e-79	286.00
IUUC-Ani-009230	Aspergillus nidulans	46.34	1.00e-83	302.00
IUUC-Ate-010285	Aspergillus terreus	44.51	1.00e-81	295.00
IUUC-Ame-011534	Astyanax mexicanus	46.04	2.00e-87	314.00
IUUC-Bgr-012121	Blumeria graminis	43.08	1.00e-75	275.00
IUUC-Bta-013143	Bos taurus	46.48	1.00e-85	308.00
IUUC-Cel-018226	Caenorhabditis elegans	41.05	2.00e-73	268.00
IUUC-Cja-019741	Callithrix jacchus	46.18	1.00e-85	308.00
IUUC-Cfa-021204	Canis familiaris	46.01	9.00e-85	305.00
IUUC-Cpo-021661	Cavia porcellus	46.01	4.00e-85	306.00
IUUC-Csa-024038	Chlorocebus sabaeus	46.18	1.00e-85	308.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	45.29	1.00e-79	288.00
IUUC-Dno-029171	Dasypus novemcinctus	46.32	5.00e-85	307.00
IUUC-Dor-030257	Dipodomys ordii	32.58	2.00e-25	108.00
IUUC-Ete-032336	Echinops telfairi	39.45	6.00e-42	162.00
IUUC-Eca-033259	Equus caballus	46.01	1.00e-84	305.00
IUUC-Eeu-035153	Erinaceus europaeus	42.14	6.00e-26	110.00
IUUC-Fca-036489	Felis catus	46.01	1.00e-84	305.00
IUUC-Fal-037485	Ficedula albicollis	46.32	7.00e-86	309.00
IUUC-Fox-037860	Fusarium oxysporum	45.43	1.00e-79	288.00
IUUC-Gga-040645	Gallus gallus	45.67	1.00e-84	305.00
IUUC-Ggo-045578	Gorilla gorilla	46.18	1.00e-85	308.00
IUUC-Hsa-046734	Homo sapiens	46.18	1.00e-85	308.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	46.01	8.00e-85	305.00
IUUC-Loc-052094	Lepisosteus oculatus	42.72	8.00e-73	266.00
IUUC-Laf-053801	Loxodonta africana	46.25	2.00e-82	298.00
IUUC-Mcc-055498	Macaca mulatta	40.98	3.00e-66	244.00
IUUC-Meu-056729	Macropus eugenii	42.51	8.00e-78	282.00
IUUC-Mga-059229	Meleagris gallopavo	46.04	1.00e-83	301.00
IUUC-Mmr-060764	Microcebus murinus	46.48	3.00e-86	310.00
IUUC-Mdo-062088	Monodelphis domestica	45.71	5.00e-87	313.00
IUUC-Mmu-064304	Mus musculus	46.18	6.00e-86	309.00
IUUC-Mpu-066340	Mustela putorius furo	46.01	1.00e-84	305.00
IUUC-Mlu-067111	Myotis lucifugus	46.32	1.00e-85	308.00
IUUC-Nfi-068478	Neosartorya fischeri	44.28	1.00e-79	289.00
IUUC-Nle-069903	Nomascus leucogenys	46.01	1.00e-84	305.00
IUUC-Opr-070221	Ochotona princeps	45.26	6.00e-83	299.00
IUUC-Oan-073660	Ornithorhynchus anatinus	45.05	9.00e-73	265.00
IUUC-Ocu-074039	Oryctolagus cuniculus	46.01	5.00e-85	306.00
IUUC-Ogu-078207	Oryza glumaepatula	99.08	0.00e+00	666.00
IUUC-Oin-079878	Oryza indica	97.87	0.00e+00	660.00
IUUC-Ome-081228	Oryza meridionalis	75.82	8.00e-99	352.00
IUUC-Osa-085454	Oryza sativa	97.87	0.00e+00	660.00
IUUC-Oga-088154	Otolemur garnettii	46.32	1.00e-85	308.00
IUUC-Oar-089915	Ovis aries	46.32	5.00e-85	306.00
IUUC-Pan-092035	Papio anubis	46.18	1.00e-85	308.00
IUUC-Psi-094096	Pelodiscus sinensis	48.96	7.00e-53	199.00
IUUC-Pno-094988	Phaeosphaeria nodorum	43.56	6.00e-74	270.00
IUUC-Pab-097726	Pongo abelii	46.18	1.00e-85	308.00
IUUC-Pca-101014	Procavia capensis	46.48	5.00e-86	310.00
IUUC-Rno-105867	Rattus norvegicus	43.03	4.00e-71	260.00
IUUC-Sce-106251	Saccharomyces cerevisiae	41.87	6.00e-75	273.00
IUUC-Sha-107039	Sarcophilus harrisii	45.71	5.00e-87	313.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	44.34	6.00e-82	296.00
IUUC-Sre-115096	Sporisorium reilianum	44.21	7.00e-77	279.00
IUUC-Ssc-116080	Sus scrofa	46.48	7.00e-86	309.00
IUUC-Tgu-116988	Taeniopygia guttata	46.32	6.00e-86	309.00
IUUC-Tre-122097	Trichoderma reesei	46.34	1.00e-79	289.00
IUUC-Tvi-122442	Trichoderma virens	45.73	6.00e-79	286.00
IUUC-Uma-129464	Ustilago maydis	44.51	1.00e-76	279.00
IUUC-Vda-129841	Verticillium dahliae	45.73	3.00e-79	287.00
IUUC-Xtr-132395	Xenopus tropicalis	47.40	1.00e-87	315.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence