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Tag Content
UUCD2 ID IUUC-Sbi-114063
UUCD1 version UUC-SoB-00455
Ensembl Protein ID Sb02g003760.1
UniProt Accession C5XAA7; C5XAA7_SORBI
Genbank Protein ID EER98031.1
Protein Name Eukaryotic translation initiation factor 3 subunit I
Genbank Nucleotide ID CM000761
Gene Name SORBI_002G044000
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb02g003760 Sb02g003760.1 Sb02g003760.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 9.90e-24 83.2 189 227
UBD/Beta-Prp 1.70e-41 143.2 6 255
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcl....afsdtllvsGsdDgtikvWDlrtgvllk 37
    gH+ +t+l ++ ++v+Gs D++ k+WD+rt +l+k
   Q: 189 GHQKTITSLskslDW--SHFVTGSLDKSAKLWDTRTLTLIK 227
    688888885432277..79****************998876 PP
   


   UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee............ 131
    ++ghe + t +++++dg++l ++++D+t vw ++g+ + t++gh+ v+++++s+++ +l++Gs+d+t+++w+++tg++l +
   Q: 6 MKGHERPLTFLRYNRDGDLLFSCAKDHTPTVWYADNGDRLGTYRGHNGAVWTCDVSRDSARLITGSADQTAKLWEVSTGKELFSfrfdaparsvef 101
    489******************************************************99***********************999*********** PP
   S: 132 .......................................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvysl 186
    + +g +g +n +v+ p ++ +++++ D t+r+Wd++tgkll++ ++gh++ ++sl
   Q: 102 aigdalavvttdnfmdhvptvqvkhiaediddqtedsalVITGIKGRINRAVWGPLNRTIITAGEDATIRIWDSETGKLLKESdkESGHQKTITSL 197
    ***********************************************************************************99777******** PP
   S: 187 sfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgs.sDg 244
    s + + ++v+gsld++ klwd +t + ++t+ +++v+ v+ sp ++ +v g+ +D
   Q: 198 SKSLDWSHFVTGSLDKSAKLWDTRTLTLIKTYVT-ERPVNAVDISPTHDTVVLGGgQDA 255
    *******************************996.568999999977777777763443 PP
   

Organism Sorghum bicolor
Functional Description
(View)

Functional Description



     Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
Protein Sequence
(Fasta)
MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPTVWYAD NGDRLGTYRG HNGAVWTCDV 60
SRDSARLITG SADQTAKLWE VSTGKELFSF RFDAPARSVE FAIGDALAVV TTDNFMDHVP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Sbi-114063|E3,WD_repeat;UBD,Beta-Prp|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCATCCAAAC CCAAATCAAG CCACCGCCGT CTCCTCCAGT CCTCCTCCTC CCCTTGCGGC 60
GCGGCCGGCG AGCACCACCA CCAGCAGCGC GCCACGATGA GGCCGATCCT GATGAAGGGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sbi-114063|E3,WD_repeat;UBD,Beta-Prp|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG sbi:SORBI_02g003760
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000115 Aegilops tauschii 46.91 4.00e-65 241.00
IUUC-Aml-001321 Ailuropoda melanoleuca 45.23 3.00e-84 304.00
IUUC-Atr-002468 Amborella trichopoda 71.19 4.00e-96 342.00
IUUC-Apl-003841 Anas platyrhynchos 45.23 9.00e-84 302.00
IUUC-Aca-005123 Anolis carolinensis 44.79 4.00e-85 306.00
IUUC-Aly-005473 Arabidopsis lyrata 76.22 2.00e-150 523.00
IUUC-Ath-007094 Arabidopsis thaliana 75.30 2.00e-148 517.00
IUUC-Ago-008000 Ashbya gossypii 41.59 2.00e-74 271.00
IUUC-Acl-008098 Aspergillus clavatus 45.90 3.00e-82 297.00
IUUC-Afl-008494 Aspergillus flavus 46.75 1.00e-84 305.00
IUUC-Afu-009080 Aspergillus fumigatus 44.98 1.00e-80 292.00
IUUC-Ani-009230 Aspergillus nidulans 47.08 2.00e-83 301.00
IUUC-Aor-010114 Aspergillus oryzae 46.75 1.00e-84 305.00
IUUC-Ate-010285 Aspergillus terreus 45.54 6.00e-82 296.00
IUUC-Ame-011534 Astyanax mexicanus 45.73 4.00e-86 310.00
IUUC-Bgr-012121 Blumeria graminis 43.34 4.00e-76 277.00
IUUC-Bta-013143 Bos taurus 45.40 7.00e-85 306.00
IUUC-Bci-013950 Botrytis cinerea 47.37 1.00e-85 309.00
IUUC-Bdi-015019 Brachypodium distachyon 88.04 6.00e-174 602.00
IUUC-Bol-015709 Brassica oleracea 76.06 5.00e-151 526.00
IUUC-Bra-017760 Brassica rapa 76.06 3.00e-152 531.00
IUUC-Cel-018226 Caenorhabditis elegans 39.14 3.00e-70 257.00
IUUC-Cja-019741 Callithrix jacchus 45.40 6.00e-85 306.00
IUUC-Cfa-021204 Canis familiaris 45.23 3.00e-84 303.00
IUUC-Cpo-021661 Cavia porcellus 44.92 4.00e-84 303.00
IUUC-Cre-022952 Chlamydomonas reinhardtii 52.45 2.00e-102 364.00
IUUC-Csa-024038 Chlorocebus sabaeus 45.40 6.00e-85 306.00
IUUC-Cin-025597 Ciona intestinalis 47.24 2.00e-87 314.00
IUUC-Cgl-026583 Colletotrichum gloeosporioides 44.62 4.00e-79 286.00
IUUC-Cne-026838 Cryptococcus neoformans 42.90 3.00e-77 281.00
IUUC-Cme-027304 Cyanidioschyzon merolae 50.93 2.00e-85 308.00
IUUC-Dre-028567 Danio rerio 44.48 2.00e-85 307.00
IUUC-Dno-029171 Dasypus novemcinctus 45.23 9.00e-84 303.00
IUUC-Dor-030257 Dipodomys ordii 32.39 7.00e-26 110.00
IUUC-Dse-031191 Dothistroma septosporum 44.38 2.00e-79 288.00
IUUC-Dme-031879 Drosophila melanogaster 47.69 7.00e-87 312.00
IUUC-Ete-032336 Echinops telfairi 38.25 2.00e-41 160.00
IUUC-Eca-033259 Equus caballus 45.23 4.00e-84 303.00
IUUC-Eeu-035153 Erinaceus europaeus 43.07 5.00e-26 110.00
IUUC-Fca-036489 Felis catus 45.23 4.00e-84 303.00
IUUC-Fal-037485 Ficedula albicollis 44.79 1.00e-83 302.00
IUUC-Fox-037860 Fusarium oxysporum 45.82 6.00e-82 296.00
IUUC-Fso-038188 Fusarium solani 45.20 2.00e-78 284.00
IUUC-Gmo-039311 Gadus morhua 44.31 6.00e-83 300.00
IUUC-Ggr-040045 Gaeumannomyces graminis 46.44 5.00e-83 300.00
IUUC-Gga-040645 Gallus gallus 44.31 2.00e-82 298.00
IUUC-Gac-042086 Gasterosteus aculeatus 44.48 4.00e-83 300.00
IUUC-Gma-043246 Glycine max 80.98 9.00e-160 555.00
IUUC-Ggo-045578 Gorilla gorilla 45.40 6.00e-85 306.00
IUUC-Hsa-046734 Homo sapiens 45.40 6.00e-85 306.00
IUUC-Hvu-047553 Hordeum vulgare 89.26 4.00e-176 609.00
IUUC-Itr-048467 Ictidomys tridecemlineatus 45.23 6.00e-84 303.00
IUUC-Kpa-049325 Komagataella pastoris 44.95 3.00e-79 287.00
IUUC-Lch-049620 Latimeria chalumnae 45.85 2.00e-77 281.00
IUUC-Lpe-051338 Leersia perrieri 86.82 1.00e-164 570.00
IUUC-Loc-052094 Lepisosteus oculatus 40.31 3.00e-71 261.00
IUUC-Lma-053047 Leptosphaeria maculans 47.99 4.00e-85 306.00
IUUC-Laf-053801 Loxodonta africana 45.14 1.00e-81 295.00
IUUC-Mcc-055498 Macaca mulatta 40.49 4.00e-67 246.00
IUUC-Meu-056729 Macropus eugenii 42.20 1.00e-75 275.00
IUUC-Mor-057025 Magnaporthe oryzae 45.82 4.00e-80 290.00
IUUC-Mpo-057511 Magnaporthe poae 48.15 1.00e-83 302.00
IUUC-Mtr-058051 Medicago truncatula 79.75 2.00e-158 550.00
IUUC-Mla-059061 Melampsora laricipopulina 43.56 5.00e-80 290.00
IUUC-Mga-059229 Meleagris gallopavo 44.65 2.00e-81 294.00
IUUC-Mvi-060399 Microbotryum violaceum 42.26 7.00e-74 269.00
IUUC-Mmr-060764 Microcebus murinus 45.40 2.00e-85 307.00
IUUC-Mdo-062088 Monodelphis domestica 45.09 4.00e-84 303.00
IUUC-Mmu-064304 Mus musculus 45.09 6.00e-85 306.00
IUUC-Mac-065520 Musa acuminata 78.82 2.00e-156 543.00
IUUC-Mpu-066340 Mustela putorius furo 45.23 4.00e-84 303.00
IUUC-Mlu-067111 Myotis lucifugus 45.09 2.00e-84 304.00
IUUC-Nfi-068478 Neosartorya fischeri 45.29 2.00e-81 295.00
IUUC-Ncr-068820 Neurospora crassa 47.06 1.00e-82 298.00
IUUC-Nle-069903 Nomascus leucogenys 45.23 2.00e-84 304.00
IUUC-Opr-070221 Ochotona princeps 44.17 3.00e-82 297.00
IUUC-Ont-071765 Oreochromis niloticus 45.09 5.00e-86 310.00
IUUC-Oan-073660 Ornithorhynchus anatinus 43.49 2.00e-70 258.00
IUUC-Ocu-074039 Oryctolagus cuniculus 45.23 3.00e-84 303.00
IUUC-Oba-075395 Oryza barthii 81.90 6.00e-157 545.00
IUUC-Obr-076334 Oryza brachyantha 85.58 2.00e-167 580.00
IUUC-Ogl-077751 Oryza glaberrima 90.18 9.00e-179 618.00
IUUC-Ogu-078207 Oryza glumaepatula 88.62 1.00e-174 604.00
IUUC-Oin-079878 Oryza indica 88.96 1.00e-175 607.00
IUUC-Olo-080677 Oryza longistaminata 77.37 3.00e-170 590.00
IUUC-Ome-081228 Oryza meridionalis 68.75 2.00e-90 324.00
IUUC-Oni-082411 Oryza nivara 79.45 4.00e-151 526.00
IUUC-Opu-083136 Oryza punctata 90.49 3.00e-179 619.00
IUUC-Oru-084916 Oryza rufipogon 86.57 5.00e-174 602.00
IUUC-Osa-085776 Oryza sativa 90.18 9.00e-179 618.00
IUUC-Ola-087053 Oryzias latipes 45.40 2.00e-85 308.00
IUUC-Olu-087602 Ostreococcus lucimarinus 58.72 3.00e-115 407.00
IUUC-Oga-088154 Otolemur garnettii 45.54 8.00e-85 306.00
IUUC-Oar-089915 Ovis aries 45.23 3.00e-84 303.00
IUUC-Ptr-091124 Pan troglodytes 36.73 8.00e-57 213.00
IUUC-Pan-092035 Papio anubis 45.40 6.00e-85 306.00
IUUC-Psi-094096 Pelodiscus sinensis 42.66 3.00e-50 190.00
IUUC-Pno-094988 Phaeosphaeria nodorum 43.96 1.00e-73 268.00
IUUC-Ppa-095949 Physcomitrella patens 72.70 2.00e-145 506.00
IUUC-Pfo-096101 Poecilia formosa 44.17 4.00e-85 306.00
IUUC-Pab-097726 Pongo abelii 45.40 6.00e-85 306.00
IUUC-Pop-099617 Populus trichocarpa 76.38 4.00e-152 529.00
IUUC-Pca-101014 Procavia capensis 45.40 4.00e-85 307.00
IUUC-Ppe-101320 Prunus persica 80.37 4.00e-159 552.00
IUUC-Pva-102789 Pteropus vampyrus 42.33 2.00e-74 271.00
IUUC-Pgr-103479 Puccinia graminis 43.56 2.00e-79 288.00
IUUC-Ptt-103981 Puccinia triticina 42.94 4.00e-79 287.00
IUUC-Pte-104278 Pyrenophora teres 46.44 1.00e-81 295.00
IUUC-Pyt-104492 Pyrenophora triticirepentis 46.44 1.00e-81 295.00
IUUC-Rno-105867 Rattus norvegicus 56.93 4.00e-44 171.00
IUUC-Sce-106251 Saccharomyces cerevisiae 40.36 3.00e-72 264.00
IUUC-Sha-107039 Sarcophilus harrisii 44.95 5.00e-84 303.00
IUUC-Sja-107758 Schizosaccharomyces japonicus 45.57 1.00e-82 298.00
IUUC-Spo-108314 Schizosaccharomyces pombe 46.01 5.00e-86 310.00
IUUC-Ssl-108478 Sclerotinia sclerotiorum 47.37 1.00e-85 308.00
IUUC-Smo-108728 Selaginella moellendorffii 70.77 2.00e-139 487.00
IUUC-Sit-110801 Setaria italica 95.71 0.00e+00 655.00
IUUC-Sly-111326 Solanum lycopersicum 76.38 2.00e-152 530.00
IUUC-Stu-112458 Solanum tuberosum 77.91 5.00e-154 536.00
IUUC-Sre-115096 Sporisorium reilianum 43.92 9.00e-75 272.00
IUUC-Ssc-116080 Sus scrofa 45.40 5.00e-85 306.00
IUUC-Tgu-116988 Taeniopygia guttata 44.92 1.00e-83 302.00
IUUC-Tru-118766 Takifugu rubripes 45.43 3.00e-85 307.00
IUUC-Tni-120197 Tetraodon nigroviridis 45.09 2.00e-85 308.00
IUUC-Tca-121316 Theobroma cacao 80.67 1.00e-158 551.00
IUUC-Tre-122097 Trichoderma reesei 47.08 2.00e-82 298.00
IUUC-Tvi-122442 Trichoderma virens 46.46 2.00e-81 295.00
IUUC-Tae-125800 Triticum aestivum 89.57 1.00e-176 611.00
IUUC-Tur-126334 Triticum urartu 78.83 1.00e-150 524.00
IUUC-Tme-127038 Tuber melanosporum 47.37 4.00e-87 313.00
IUUC-Ttr-128659 Tursiops truncatus 43.25 2.00e-66 244.00
IUUC-Uma-129464 Ustilago maydis 43.92 3.00e-74 271.00
IUUC-Vda-129841 Verticillium dahliae 45.51 2.00e-80 291.00
IUUC-Vvi-131076 Vitis vinifera 80.67 1.00e-160 558.00
IUUC-Xtr-132395 Xenopus tropicalis 46.93 1.00e-86 312.00
IUUC-Xma-133383 Xiphophorus maculatus 44.17 8.00e-85 306.00
IUUC-Yli-134586 Yarrowia lipolytica 44.31 3.00e-70 258.00
IUUC-Zma-135667 Zea mays 98.16 0.00e+00 665.00
Created Date 25-Jun-2017

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