iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104650

Ensembl Protein ID

EDU50693

UniProt Accession

B2WCR5; B2WCR5_PYRTR

Genbank Protein ID

EDU50693.1

Protein Name

F-box/WD repeat containing protein pof1

Genbank Nucleotide ID

DS231622

Gene Name

PTRG_07774

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_07774	EDU50693	EDU50693

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-44	145.3	421	459
UBD/Beta-Prp	3.80e-91	304.6	278	533

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH ++v++la+ sd ++l+s+s  g +k+W+++t+++l++
   Q: 421  GHRNDVRALALsSDdRMLASAS-SGGLKIWNIKTQNCLRT 459
           8**********97757777777.688***********985 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk..ghedsvlslsfsp.... 104
           ++ +c+ f    +++a+ ++ + +++w+++t+  +r+    + +  +  + s++      g +D+ ++  d + g+ ++ +   +   +v+s++++     
   Q: 278  DRTQCISFYGRADYIAVHGAEKAVEIWRIKTPEEVRKSlVRKRKRKREKSKSETNGEAQEGMDDDKVNAADAEIGEVFVPYVtvRTAGKVRSVAWMHikgt 378
           67899*************************99997665233333333333333333677899999777779998888765544569999***999998663 PP
   S: 105  sgdklvsGshdrtirvwdletgqclee............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngk 193
           ++  l++G++ + + v+++++++ +++             lsgh+  v+ +++++d+++l+s+s  + +++W++kt+++lrtl+    ++  + +f +  k
   Q: 379  KKLQLLVGTNNNLLDVYEIPQRSNSKSeeapdysrtlsvELSGHRNDVRALALSSDDRMLASASS-GGLKIWNIKTQNCLRTLEC---GYALCCAFLPGDK 475
           336689**************999999999***************************9**999997.569**************76...99*********** PP
   S: 194  elvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl 251
            +v g +dg+++l+d+ +++ +++  +h+  v+ ++++p+++ l++gs+D+s+++W+ 
   Q: 476  IVVVGTKDGYIELYDIAASTLLDKISAHEGAVWTMQVHPDGKSLITGSADKSVKFWNF 533
           ********************************************************85 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MVKSYSKYEQ TDAFGVVATA TSNIVWTPEG LTQPGSSRAA GAGRAYAAAN EEVLCWDIKK 60
SELVSRWRDN SCTEQVTVIC RSDVDPDVFA VGYTDGSIRI WDARTSTVII SFNGHKSAVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCAAAT CATACAGGTA ATGCGCATCT GCAGCGCATC CCATATAGAG CTCCGACTGA 60
CGCTCAACCA GTAAATACGA GCAGACCGAC GCTTTTGGTG TGGTCGCGAC TGCCACCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	34.92	6.00e-131	459.00
IUUC-Aml-001245	Ailuropoda melanoleuca	37.68	2.00e-166	577.00
IUUC-Atr-002700	Amborella trichopoda	35.59	3.00e-145	507.00
IUUC-Apl-004164	Anas platyrhynchos	38.08	1.00e-130	458.00
IUUC-Aca-004765	Anolis carolinensis	36.13	1.00e-159	555.00
IUUC-Aly-006503	Arabidopsis lyrata	34.79	4.00e-148	517.00
IUUC-Ath-006848	Arabidopsis thaliana	34.61	1.00e-149	521.00
IUUC-Ago-007909	Ashbya gossypii	42.46	0.00e+00	696.00
IUUC-Acl-008238	Aspergillus clavatus	60.60	0.00e+00	1145.00
IUUC-Afl-008544	Aspergillus flavus	62.10	0.00e+00	1144.00
IUUC-Afu-008868	Aspergillus fumigatus	61.75	0.00e+00	1157.00
IUUC-Ani-009367	Aspergillus nidulans	60.63	0.00e+00	1099.00
IUUC-Ang-009732	Aspergillus niger	62.61	0.00e+00	1178.00
IUUC-Aor-010140	Aspergillus oryzae	62.39	0.00e+00	1150.00
IUUC-Ate-010572	Aspergillus terreus	60.41	0.00e+00	1098.00
IUUC-Ame-010956	Astyanax mexicanus	43.09	8.00e-131	459.00
IUUC-Bgr-012296	Blumeria graminis	57.48	0.00e+00	1108.00
IUUC-Bta-012716	Bos taurus	37.54	4.00e-172	596.00
IUUC-Bci-013699	Botrytis cinerea	61.40	0.00e+00	1130.00
IUUC-Bdi-014525	Brachypodium distachyon	36.77	6.00e-143	499.00
IUUC-Bol-015117	Brassica oleracea	35.61	6.00e-151	526.00
IUUC-Bra-016869	Brassica rapa	36.11	8.00e-153	532.00
IUUC-Cel-018570	Caenorhabditis elegans	29.81	1.00e-96	346.00
IUUC-Cja-019425	Callithrix jacchus	38.06	1.00e-170	591.00
IUUC-Cfa-020787	Canis familiaris	37.68	2.00e-167	581.00
IUUC-Cpo-021729	Cavia porcellus	39.76	3.00e-138	483.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	41.16	4.00e-96	344.00
IUUC-Csa-024098	Chlorocebus sabaeus	37.29	4.00e-164	570.00
IUUC-Cho-024495	Choloepus hoffmanni	39.42	1.00e-99	355.00
IUUC-Cin-025245	Ciona intestinalis	34.56	2.00e-99	354.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	60.12	0.00e+00	1105.00
IUUC-Cne-026835	Cryptococcus neoformans	40.12	4.00e-179	620.00
IUUC-Cme-027162	Cyanidioschyzon merolae	23.78	2.00e-45	176.00
IUUC-Dre-027874	Danio rerio	36.46	4.00e-174	603.00
IUUC-Dno-028905	Dasypus novemcinctus	38.19	2.00e-170	591.00
IUUC-Dor-030383	Dipodomys ordii	31.12	2.00e-60	226.00
IUUC-Dse-031297	Dothistroma septosporum	58.11	0.00e+00	1080.00
IUUC-Dme-031956	Drosophila melanogaster	31.96	9.00e-127	446.00
IUUC-Ete-032608	Echinops telfairi	35.28	5.00e-96	343.00
IUUC-Eca-034181	Equus caballus	37.47	7.00e-166	576.00
IUUC-Eeu-034495	Erinaceus europaeus	37.72	1.00e-161	561.00
IUUC-Fca-035994	Felis catus	38.30	3.00e-162	563.00
IUUC-Fal-036611	Ficedula albicollis	36.80	9.00e-163	565.00
IUUC-Fox-037807	Fusarium oxysporum	59.59	0.00e+00	1129.00
IUUC-Fso-038090	Fusarium solani	60.23	0.00e+00	1133.00
IUUC-Gmo-039018	Gadus morhua	33.27	1.00e-82	299.00
IUUC-Ggr-039748	Gaeumannomyces graminis	57.30	0.00e+00	1113.00
IUUC-Gga-040707	Gallus gallus	41.96	5.00e-128	450.00
IUUC-Gac-042334	Gasterosteus aculeatus	30.84	6.00e-73	266.00
IUUC-Gma-043860	Glycine max	36.13	3.00e-149	521.00
IUUC-Ggo-045334	Gorilla gorilla	37.09	5.00e-161	560.00
IUUC-Hsa-046996	Homo sapiens	37.19	6.00e-161	559.00
IUUC-Hvu-047381	Hordeum vulgare	34.65	2.00e-85	308.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	37.27	3.00e-166	577.00
IUUC-Kpa-049185	Komagataella pastoris	39.73	0.00e+00	673.00
IUUC-Lch-050098	Latimeria chalumnae	35.03	1.00e-147	515.00
IUUC-Lpe-050710	Leersia perrieri	34.31	1.00e-140	492.00
IUUC-Loc-052745	Lepisosteus oculatus	35.67	2.00e-162	564.00
IUUC-Lma-053104	Leptosphaeria maculans	85.02	0.00e+00	1587.00
IUUC-Laf-054395	Loxodonta africana	38.20	3.00e-171	594.00
IUUC-Mcc-055077	Macaca mulatta	37.78	7.00e-171	592.00
IUUC-Meu-056418	Macropus eugenii	40.09	1.00e-89	323.00
IUUC-Mor-057031	Magnaporthe oryzae	56.51	0.00e+00	1006.00
IUUC-Mpo-057420	Magnaporthe poae	57.19	0.00e+00	1092.00
IUUC-Mtr-057838	Medicago truncatula	36.34	5.00e-158	550.00
IUUC-Mla-058854	Melampsora laricipopulina	40.51	0.00e+00	650.00
IUUC-Mga-060120	Meleagris gallopavo	39.37	4.00e-128	450.00
IUUC-Mvi-060407	Microbotryum violaceum	50.86	2.00e-165	575.00
IUUC-Mmr-060635	Microcebus murinus	37.78	1.00e-166	578.00
IUUC-Mdo-063023	Monodelphis domestica	37.60	1.00e-170	591.00
IUUC-Mmu-064103	Mus musculus	38.10	7.00e-173	599.00
IUUC-Mac-065569	Musa acuminata	35.68	9.00e-150	522.00
IUUC-Mpu-066462	Mustela putorius furo	37.41	1.00e-166	578.00
IUUC-Mlu-067894	Myotis lucifugus	38.20	7.00e-171	592.00
IUUC-Nfi-068321	Neosartorya fischeri	61.82	0.00e+00	1154.00
IUUC-Ncr-068661	Neurospora crassa	58.08	0.00e+00	1108.00
IUUC-Nle-069409	Nomascus leucogenys	37.15	5.00e-162	563.00
IUUC-Opr-070445	Ochotona princeps	41.02	5.00e-123	433.00
IUUC-Ont-072339	Oreochromis niloticus	37.19	1.00e-168	585.00
IUUC-Oan-073688	Ornithorhynchus anatinus	36.92	1.00e-155	541.00
IUUC-Ocu-074227	Oryctolagus cuniculus	37.68	3.00e-169	587.00
IUUC-Oba-075635	Oryza barthii	33.96	1.00e-136	479.00
IUUC-Obr-076897	Oryza brachyantha	35.56	2.00e-147	514.00
IUUC-Ogl-077555	Oryza glaberrima	33.96	2.00e-136	478.00
IUUC-Ogu-078724	Oryza glumaepatula	34.28	7.00e-137	479.00
IUUC-Oin-080030	Oryza indica	34.39	2.00e-136	478.00
IUUC-Olo-080687	Oryza longistaminata	32.32	3.00e-125	441.00
IUUC-Ome-081867	Oryza meridionalis	34.39	7.00e-137	479.00
IUUC-Oni-082559	Oryza nivara	34.39	1.00e-136	479.00
IUUC-Opu-083332	Oryza punctata	39.03	9.00e-131	459.00
IUUC-Oru-084455	Oryza rufipogon	34.39	2.00e-136	478.00
IUUC-Osa-085793	Oryza sativa	34.39	2.00e-136	478.00
IUUC-Ola-087395	Oryzias latipes	42.91	1.00e-118	419.00
IUUC-Olu-087768	Ostreococcus lucimarinus	37.95	1.00e-144	505.00
IUUC-Oga-088574	Otolemur garnettii	37.85	8.00e-169	585.00
IUUC-Oar-089453	Ovis aries	36.95	9.00e-171	592.00
IUUC-Ptr-090694	Pan troglodytes	37.19	9.00e-161	559.00
IUUC-Pan-092420	Papio anubis	37.58	2.00e-170	591.00
IUUC-Psi-093683	Pelodiscus sinensis	36.63	2.00e-160	557.00
IUUC-Pma-094197	Petromyzon marinus	31.00	5.00e-27	112.00
IUUC-Pno-094783	Phaeosphaeria nodorum	79.96	0.00e+00	1513.00
IUUC-Ppa-095208	Physcomitrella patens	40.69	1.00e-101	362.00
IUUC-Pfo-096299	Poecilia formosa	36.39	1.00e-172	598.00
IUUC-Pab-098706	Pongo abelii	38.03	2.00e-171	594.00
IUUC-Pop-099275	Populus trichocarpa	36.21	1.00e-145	508.00
IUUC-Pca-100796	Procavia capensis	32.55	5.00e-111	393.00
IUUC-Ppe-101861	Prunus persica	36.62	8.00e-148	516.00
IUUC-Pva-103241	Pteropus vampyrus	37.36	8.00e-160	555.00
IUUC-Pgr-103432	Puccinia graminis	38.72	2.00e-180	624.00
IUUC-Ptt-103742	Puccinia triticina	36.46	7.00e-166	576.00
IUUC-Pte-104069	Pyrenophora teres	97.86	0.00e+00	1748.00
IUUC-Rno-105219	Rattus norvegicus	37.68	2.00e-166	578.00
IUUC-Sce-106271	Saccharomyces cerevisiae	41.28	0.00e+00	706.00
IUUC-Sha-107550	Sarcophilus harrisii	37.56	3.00e-167	580.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	41.84	0.00e+00	707.00
IUUC-Spo-108239	Schizosaccharomyces pombe	41.89	0.00e+00	735.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	62.58	0.00e+00	1163.00
IUUC-Smo-109477	Selaginella moellendorffii	34.65	3.00e-142	497.00
IUUC-Sit-110000	Setaria italica	35.47	1.00e-132	465.00
IUUC-Sly-111595	Solanum lycopersicum	36.53	4.00e-149	520.00
IUUC-Stu-112516	Solanum tuberosum	36.13	1.00e-145	508.00
IUUC-Sar-113195	Sorex araneus	43.21	2.00e-116	411.00
IUUC-Sbi-114465	Sorghum bicolor	33.96	3.00e-144	504.00
IUUC-Sre-115006	Sporisorium reilianum	39.52	0.00e+00	657.00
IUUC-Ssc-115929	Sus scrofa	37.47	4.00e-167	580.00
IUUC-Tgu-117282	Taeniopygia guttata	36.69	1.00e-160	558.00
IUUC-Tru-118406	Takifugu rubripes	37.08	1.00e-166	578.00
IUUC-Tsy-119170	Tarsius syrichta	37.40	2.00e-166	578.00
IUUC-Tni-119721	Tetraodon nigroviridis	36.89	1.00e-163	568.00
IUUC-Tca-121761	Theobroma cacao	36.22	8.00e-157	546.00
IUUC-Tre-121908	Trichoderma reesei	59.11	0.00e+00	1089.00
IUUC-Tvi-122547	Trichoderma virens	59.35	0.00e+00	1099.00
IUUC-Tae-125433	Triticum aestivum	35.95	5.00e-140	490.00
IUUC-Tur-126811	Triticum urartu	37.37	3.00e-142	497.00
IUUC-Tme-126987	Tuber melanosporum	56.59	0.00e+00	1045.00
IUUC-Tbe-127315	Tupaia belangeri	43.71	2.00e-108	385.00
IUUC-Ttr-129165	Tursiops truncatus	32.99	3.00e-124	437.00
IUUC-Uma-129651	Ustilago maydis	40.06	0.00e+00	672.00
IUUC-Vda-129973	Verticillium dahliae	58.55	0.00e+00	1075.00
IUUC-Vpa-130163	Vicugna pacos	31.42	2.00e-60	225.00
IUUC-Vvi-131402	Vitis vinifera	37.12	2.00e-153	535.00
IUUC-Xtr-132296	Xenopus tropicalis	36.84	4.00e-165	573.00
IUUC-Xma-133028	Xiphophorus maculatus	36.60	1.00e-172	598.00
IUUC-Yli-134484	Yarrowia lipolytica	43.92	0.00e+00	738.00
IUUC-Zma-135938	Zea mays	33.33	1.00e-140	492.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence