iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095849

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544935

Gene Name

PHYPADRAFT_123753

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S46_317V6	PP1S46_317V6.2	PP1S46_317V6.2
PP1S46_317V6	PP1S46_317V6.1	PP1S46_317V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-22	77.2	292	325

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           gH++sv +l++  ++ + ++s+s Dgt+++WD+r
   Q: 292  GHSASVEDLQWspTEaDVFASCSVDGTLRIWDTR 325
           8***********655999**************76 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MARTKKKGKR GNKKPNKQEL QASEYGAEVE MEDAEGNGAS ASAPPQPTKV WVPGVDEIGD 60
DEELQFDPTA YHCLHSFKLG WPCLSFDIMR DDLGVLRRDF PHAMYCVAGT QADQPGSNSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGGGTTTA ACCAAGCTGC AGGTTGTGGA TACTCGCTGC GAGTGAGTGA GAGAGAGGGG 60
ATTTTCTTCA TTGTGATTTA GCTATGGCGC GTACGAAGAA GAAGGGAAAG CGCGGCAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

ppp:PHYPADRAFT_123753

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	55.73	2.00e-135	475.00
IUUC-Aml-002309	Ailuropoda melanoleuca	43.21	9.00e-94	336.00
IUUC-Atr-002461	Amborella trichopoda	61.97	3.00e-162	564.00
IUUC-Aca-004760	Anolis carolinensis	41.36	2.00e-90	325.00
IUUC-Aly-005405	Arabidopsis lyrata	60.22	4.00e-144	503.00
IUUC-Ath-007178	Arabidopsis thaliana	59.12	3.00e-147	514.00
IUUC-Ago-007735	Ashbya gossypii	34.80	5.00e-74	271.00
IUUC-Acl-008294	Aspergillus clavatus	37.22	1.00e-73	269.00
IUUC-Afl-008486	Aspergillus flavus	35.60	8.00e-72	263.00
IUUC-Afu-009019	Aspergillus fumigatus	36.03	2.00e-73	268.00
IUUC-Ani-009465	Aspergillus nidulans	36.85	6.00e-73	267.00
IUUC-Ang-009641	Aspergillus niger	33.99	1.00e-70	259.00
IUUC-Ate-010426	Aspergillus terreus	36.18	5.00e-74	271.00
IUUC-Ame-010856	Astyanax mexicanus	41.38	2.00e-91	328.00
IUUC-Bgr-012258	Blumeria graminis	34.18	3.00e-61	228.00
IUUC-Bta-012437	Bos taurus	40.51	3.00e-93	334.00
IUUC-Bci-013647	Botrytis cinerea	34.29	4.00e-72	264.00
IUUC-Bdi-014728	Brachypodium distachyon	57.37	8.00e-152	529.00
IUUC-Bol-015126	Brassica oleracea	58.35	4.00e-143	500.00
IUUC-Bra-017677	Brassica rapa	63.68	4.00e-67	246.00
IUUC-Cel-018454	Caenorhabditis elegans	38.01	3.00e-86	311.00
IUUC-Cja-018859	Callithrix jacchus	40.83	1.00e-91	329.00
IUUC-Cfa-020912	Canis familiaris	41.92	1.00e-92	332.00
IUUC-Cpo-021368	Cavia porcellus	42.33	5.00e-95	340.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	48.31	1.00e-54	206.00
IUUC-Csa-023599	Chlorocebus sabaeus	42.57	6.00e-94	337.00
IUUC-Cin-025718	Ciona intestinalis	43.44	3.00e-99	354.00
IUUC-Csv-025806	Ciona savignyi	47.10	1.00e-81	295.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	31.63	7.00e-59	220.00
IUUC-Cne-026781	Cryptococcus neoformans	39.61	6.00e-81	293.00
IUUC-Cme-027129	Cyanidioschyzon merolae	34.60	1.00e-45	176.00
IUUC-Dre-028225	Danio rerio	43.09	1.00e-95	342.00
IUUC-Dno-029792	Dasypus novemcinctus	41.96	2.00e-89	322.00
IUUC-Dor-030773	Dipodomys ordii	39.66	9.00e-40	156.00
IUUC-Dse-031289	Dothistroma septosporum	37.83	3.00e-75	275.00
IUUC-Dme-031676	Drosophila melanogaster	42.15	5.00e-97	347.00
IUUC-Eca-033618	Equus caballus	41.52	3.00e-91	328.00
IUUC-Fca-036102	Felis catus	42.58	1.00e-93	335.00
IUUC-Fox-037899	Fusarium oxysporum	35.56	2.00e-73	268.00
IUUC-Fso-038130	Fusarium solani	36.59	1.00e-73	269.00
IUUC-Gmo-038741	Gadus morhua	42.66	1.00e-92	332.00
IUUC-Ggr-040086	Gaeumannomyces graminis	35.36	1.00e-74	273.00
IUUC-Gac-042243	Gasterosteus aculeatus	42.40	6.00e-97	347.00
IUUC-Gma-044177	Glycine max	57.37	7.00e-143	499.00
IUUC-Ggo-044564	Gorilla gorilla	42.39	5.00e-95	340.00
IUUC-Hsa-046021	Homo sapiens	42.17	8.00e-94	336.00
IUUC-Hvu-047721	Hordeum vulgare	53.16	1.00e-132	465.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	41.48	2.00e-92	332.00
IUUC-Kpa-049271	Komagataella pastoris	37.33	1.00e-72	266.00
IUUC-Lch-049974	Latimeria chalumnae	41.16	8.00e-93	333.00
IUUC-Lpe-051388	Leersia perrieri	53.32	5.00e-127	446.00
IUUC-Lma-053010	Leptosphaeria maculans	36.87	5.00e-75	274.00
IUUC-Laf-054058	Loxodonta africana	43.47	5.00e-95	340.00
IUUC-Mcc-055246	Macaca mulatta	40.34	3.00e-94	337.00
IUUC-Meu-056795	Macropus eugenii	42.03	9.00e-92	329.00
IUUC-Mor-057175	Magnaporthe oryzae	35.56	2.00e-74	272.00
IUUC-Mpo-057388	Magnaporthe poae	34.57	6.00e-59	221.00
IUUC-Mtr-057752	Medicago truncatula	56.07	1.00e-141	495.00
IUUC-Mla-058904	Melampsora laricipopulina	38.85	1.00e-75	276.00
IUUC-Mvi-060525	Microbotryum violaceum	38.74	5.00e-79	287.00
IUUC-Mmr-060905	Microcebus murinus	41.39	5.00e-93	333.00
IUUC-Mmu-063428	Mus musculus	42.34	2.00e-93	335.00
IUUC-Mac-065276	Musa acuminata	57.08	4.00e-140	490.00
IUUC-Mpu-066062	Mustela putorius furo	42.83	4.00e-94	337.00
IUUC-Mlu-068115	Myotis lucifugus	52.21	5.00e-62	229.00
IUUC-Nfi-068512	Neosartorya fischeri	35.96	1.00e-71	263.00
IUUC-Ncr-068629	Neurospora crassa	35.19	2.00e-71	262.00
IUUC-Nle-070016	Nomascus leucogenys	41.70	2.00e-91	328.00
IUUC-Ont-072230	Oreochromis niloticus	42.20	2.00e-95	342.00
IUUC-Oan-072759	Ornithorhynchus anatinus	31.34	1.00e-59	222.00
IUUC-Ocu-074511	Oryctolagus cuniculus	41.47	1.00e-91	329.00
IUUC-Oba-075093	Oryza barthii	54.95	3.00e-133	467.00
IUUC-Obr-076130	Oryza brachyantha	57.05	5.00e-145	506.00
IUUC-Ogl-077397	Oryza glaberrima	57.88	1.00e-145	508.00
IUUC-Ogu-078111	Oryza glumaepatula	54.68	3.00e-126	446.00
IUUC-Oin-079162	Oryza indica	55.38	1.00e-137	482.00
IUUC-Olo-080909	Oryza longistaminata	47.22	1.00e-123	436.00
IUUC-Ome-081768	Oryza meridionalis	55.16	4.00e-128	451.00
IUUC-Oni-082453	Oryza nivara	55.35	3.00e-136	479.00
IUUC-Opu-084133	Oryza punctata	53.45	5.00e-119	421.00
IUUC-Oru-085056	Oryza rufipogon	51.75	3.00e-107	380.00
IUUC-Osa-085735	Oryza sativa	57.17	4.00e-145	507.00
IUUC-Ola-087066	Oryzias latipes	42.95	9.00e-94	336.00
IUUC-Olu-087594	Ostreococcus lucimarinus	45.32	1.00e-107	382.00
IUUC-Oga-087974	Otolemur garnettii	40.00	3.00e-91	328.00
IUUC-Oar-089902	Ovis aries	41.05	4.00e-92	330.00
IUUC-Ptr-090469	Pan troglodytes	40.26	2.00e-88	318.00
IUUC-Pan-092858	Papio anubis	41.96	4.00e-94	337.00
IUUC-Psi-094092	Pelodiscus sinensis	39.06	8.00e-46	176.00
IUUC-Pno-094919	Phaeosphaeria nodorum	36.12	5.00e-69	254.00
IUUC-Pfo-096535	Poecilia formosa	41.78	1.00e-93	335.00
IUUC-Pab-098478	Pongo abelii	42.61	9.00e-95	339.00
IUUC-Pop-098902	Populus trichocarpa	57.74	6.00e-148	516.00
IUUC-Pca-100403	Procavia capensis	48.80	2.00e-74	271.00
IUUC-Ppe-101997	Prunus persica	59.73	8.00e-151	526.00
IUUC-Pva-102423	Pteropus vampyrus	41.70	1.00e-93	335.00
IUUC-Pgr-103339	Puccinia graminis	38.27	3.00e-83	302.00
IUUC-Ptt-103937	Puccinia triticina	38.48	9.00e-85	306.00
IUUC-Pte-104051	Pyrenophora teres	36.64	1.00e-72	266.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	36.64	6.00e-72	264.00
IUUC-Rno-106118	Rattus norvegicus	42.92	3.00e-91	328.00
IUUC-Sce-106330	Saccharomyces cerevisiae	35.28	2.00e-70	259.00
IUUC-Sha-106564	Sarcophilus harrisii	41.28	3.00e-77	281.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	38.79	2.00e-86	311.00
IUUC-Spo-108351	Schizosaccharomyces pombe	39.18	9.00e-92	330.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	34.96	8.00e-74	270.00
IUUC-Smo-109619	Selaginella moellendorffii	57.49	2.00e-150	525.00
IUUC-Sit-109857	Setaria italica	60.18	3.00e-149	520.00
IUUC-Sly-111245	Solanum lycopersicum	53.98	1.00e-133	469.00
IUUC-Stu-112645	Solanum tuberosum	56.83	7.00e-146	509.00
IUUC-Sar-113342	Sorex araneus	40.29	6.00e-82	296.00
IUUC-Sbi-114359	Sorghum bicolor	60.00	2.00e-148	518.00
IUUC-Sre-115098	Sporisorium reilianum	35.56	8.00e-74	270.00
IUUC-Ssc-115496	Sus scrofa	41.65	2.00e-92	332.00
IUUC-Tru-117662	Takifugu rubripes	41.61	2.00e-93	335.00
IUUC-Tni-120564	Tetraodon nigroviridis	41.28	8.00e-80	289.00
IUUC-Tca-121710	Theobroma cacao	59.46	4.00e-145	507.00
IUUC-Tre-122239	Trichoderma reesei	36.47	1.00e-74	272.00
IUUC-Tvi-122589	Trichoderma virens	36.30	7.00e-75	273.00
IUUC-Tae-125574	Triticum aestivum	59.87	9.00e-152	529.00
IUUC-Tur-126135	Triticum urartu	58.93	3.00e-106	378.00
IUUC-Tme-127073	Tuber melanosporum	35.81	2.00e-69	256.00
IUUC-Ttr-128383	Tursiops truncatus	40.52	2.00e-89	322.00
IUUC-Uma-129345	Ustilago maydis	36.70	2.00e-77	282.00
IUUC-Vda-129893	Verticillium dahliae	35.99	2.00e-74	272.00
IUUC-Vvi-131067	Vitis vinifera	58.24	2.00e-148	518.00
IUUC-Xtr-132603	Xenopus tropicalis	43.54	1.00e-99	356.00
IUUC-Xma-133149	Xiphophorus maculatus	41.97	4.00e-93	334.00
IUUC-Yli-134459	Yarrowia lipolytica	36.91	6.00e-73	267.00
IUUC-Zma-135548	Zea mays	59.55	2.00e-147	514.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence