iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093450

Ensembl Protein ID

ENSPSIP00000014202.1

UniProt Accession

K7G1P1; K7G1P1_PELSI

Genbank Protein ID

ENSPSIP00000014202

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01052985

Gene Name

NEDD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000012665.1	ENSPSIT00000014269.1	ENSPSIP00000014202.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-22	79.2	80	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtg 33
           tc+++ s+  ++vsG+ D+t+ +WDl++ 
   Q: 80   TCVSLnSSsMHIVSGGLDNTVNIWDLKSR 108
           79999855599**************9875 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MQESIRFASS GDDIKIWDSS SITVVEQFNP HASHQVNSLC WGSNNNFLVT ASTIGDKIVV 60
SSCKGKPVPL FELAEGAKQT CVSLNSSSMH IVSGGLDNTV NIWDLKSRRL HRCLKDHKDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGGAAGGC GAACGCATTC TATCCCTTTT GCCCTCTCTG GGCCGCCGTA CACAAGAGTC 60
CGTTTGGGGA CTTGCAGTGG CTGTTGGGAC GGGCTGTTAA GTTGCAAGAG GCGCGGAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	27.35	2.00e-17	84.30
IUUC-Aml-002397	Ailuropoda melanoleuca	67.46	0.00e+00	869.00
IUUC-Atr-002464	Amborella trichopoda	30.13	2.00e-38	154.00
IUUC-Apl-003870	Anas platyrhynchos	76.11	0.00e+00	986.00
IUUC-Aca-004925	Anolis carolinensis	69.45	0.00e+00	902.00
IUUC-Aly-005931	Arabidopsis lyrata	32.68	4.00e-40	159.00
IUUC-Ath-006681	Arabidopsis thaliana	31.80	9.00e-40	158.00
IUUC-Ame-010906	Astyanax mexicanus	46.28	9.00e-150	523.00
IUUC-Bta-013389	Bos taurus	68.85	0.00e+00	882.00
IUUC-Bdi-014340	Brachypodium distachyon	30.03	5.00e-40	159.00
IUUC-Bol-016282	Brassica oleracea	33.33	3.00e-40	159.00
IUUC-Bra-016623	Brassica rapa	32.57	5.00e-40	159.00
IUUC-Cja-019541	Callithrix jacchus	68.51	0.00e+00	877.00
IUUC-Cfa-021218	Canis familiaris	66.87	0.00e+00	859.00
IUUC-Cpo-021697	Cavia porcellus	64.08	0.00e+00	816.00
IUUC-Csa-023620	Chlorocebus sabaeus	68.06	0.00e+00	895.00
IUUC-Cho-025105	Choloepus hoffmanni	63.54	0.00e+00	654.00
IUUC-Csv-026234	Ciona savignyi	38.31	4.00e-52	197.00
IUUC-Dre-028251	Danio rerio	65.22	2.00e-105	376.00
IUUC-Dno-029281	Dasypus novemcinctus	63.46	0.00e+00	672.00
IUUC-Dor-031020	Dipodomys ordii	52.80	2.00e-105	376.00
IUUC-Ete-033113	Echinops telfairi	68.11	3.00e-149	521.00
IUUC-Eca-034230	Equus caballus	68.75	0.00e+00	869.00
IUUC-Eeu-034671	Erinaceus europaeus	57.57	5.00e-173	600.00
IUUC-Fca-035775	Felis catus	68.36	0.00e+00	886.00
IUUC-Fal-037557	Ficedula albicollis	73.00	0.00e+00	903.00
IUUC-Gmo-038586	Gadus morhua	62.21	2.00e-108	385.00
IUUC-Gga-040153	Gallus gallus	75.56	0.00e+00	966.00
IUUC-Gac-041385	Gasterosteus aculeatus	43.13	4.00e-135	474.00
IUUC-Gma-043049	Glycine max	31.58	4.00e-42	166.00
IUUC-Ggo-044576	Gorilla gorilla	68.66	0.00e+00	907.00
IUUC-Hsa-046198	Homo sapiens	68.66	0.00e+00	907.00
IUUC-Hvu-047794	Hordeum vulgare	35.71	7.00e-17	79.70
IUUC-Lch-050561	Latimeria chalumnae	51.64	6.00e-165	573.00
IUUC-Lpe-051469	Leersia perrieri	30.03	4.00e-38	152.00
IUUC-Loc-052816	Lepisosteus oculatus	49.03	1.00e-155	543.00
IUUC-Laf-053880	Loxodonta africana	66.47	0.00e+00	821.00
IUUC-Mcc-054977	Macaca mulatta	68.51	0.00e+00	897.00
IUUC-Meu-056141	Macropus eugenii	57.96	8.00e-154	536.00
IUUC-Mtr-058441	Medicago truncatula	31.82	7.00e-41	162.00
IUUC-Mga-060141	Meleagris gallopavo	73.34	0.00e+00	927.00
IUUC-Mmr-061201	Microcebus murinus	68.26	0.00e+00	897.00
IUUC-Mdo-061855	Monodelphis domestica	65.10	0.00e+00	815.00
IUUC-Mmu-064342	Mus musculus	66.27	0.00e+00	847.00
IUUC-Mac-065368	Musa acuminata	31.15	6.00e-37	149.00
IUUC-Mpu-066191	Mustela putorius furo	67.31	0.00e+00	867.00
IUUC-Mlu-067310	Myotis lucifugus	67.96	0.00e+00	866.00
IUUC-Nle-069990	Nomascus leucogenys	68.81	0.00e+00	910.00
IUUC-Opr-070336	Ochotona princeps	61.94	0.00e+00	763.00
IUUC-Ont-071675	Oreochromis niloticus	43.41	4.00e-137	481.00
IUUC-Oan-072772	Ornithorhynchus anatinus	68.57	0.00e+00	772.00
IUUC-Ocu-074095	Oryctolagus cuniculus	69.10	0.00e+00	883.00
IUUC-Oba-075327	Oryza barthii	30.38	9.00e-40	158.00
IUUC-Obr-076119	Oryza brachyantha	30.72	4.00e-40	159.00
IUUC-Ogl-077820	Oryza glaberrima	30.03	5.00e-39	155.00
IUUC-Ogu-078679	Oryza glumaepatula	30.38	2.00e-39	157.00
IUUC-Oin-079891	Oryza indica	30.38	6.00e-40	159.00
IUUC-Olo-080414	Oryza longistaminata	33.65	1.00e-35	144.00
IUUC-Ome-081888	Oryza meridionalis	30.72	7.00e-40	158.00
IUUC-Oni-082417	Oryza nivara	30.38	1.00e-39	157.00
IUUC-Opu-083393	Oryza punctata	30.38	1.00e-39	157.00
IUUC-Oru-084698	Oryza rufipogon	30.38	7.00e-40	159.00
IUUC-Osa-086121	Oryza sativa	30.38	1.00e-39	157.00
IUUC-Ola-086806	Oryzias latipes	41.26	1.00e-138	486.00
IUUC-Olu-087591	Ostreococcus lucimarinus	23.19	1.00e-14	73.90
IUUC-Oga-088622	Otolemur garnettii	68.50	0.00e+00	890.00
IUUC-Oar-090391	Ovis aries	64.96	0.00e+00	736.00
IUUC-Ptr-091036	Pan troglodytes	68.51	0.00e+00	905.00
IUUC-Pan-092576	Papio anubis	68.51	0.00e+00	898.00
IUUC-Pma-094101	Petromyzon marinus	55.45	3.00e-103	367.00
IUUC-Ppa-095636	Physcomitrella patens	33.23	8.00e-43	168.00
IUUC-Pfo-097142	Poecilia formosa	59.67	6.00e-107	381.00
IUUC-Pab-097829	Pongo abelii	68.51	0.00e+00	901.00
IUUC-Pop-099687	Populus trichocarpa	31.31	7.00e-39	155.00
IUUC-Pca-100217	Procavia capensis	65.38	3.00e-153	535.00
IUUC-Ppe-101502	Prunus persica	32.66	4.00e-40	159.00
IUUC-Pva-102736	Pteropus vampyrus	66.62	0.00e+00	872.00
IUUC-Rno-104977	Rattus norvegicus	65.07	0.00e+00	813.00
IUUC-Sha-107003	Sarcophilus harrisii	65.46	0.00e+00	852.00
IUUC-Smo-109002	Selaginella moellendorffii	31.18	9.00e-40	158.00
IUUC-Sit-109796	Setaria italica	30.23	4.00e-39	156.00
IUUC-Sly-110941	Solanum lycopersicum	29.61	2.00e-38	153.00
IUUC-Stu-112314	Solanum tuberosum	30.74	6.00e-39	155.00
IUUC-Sar-112926	Sorex araneus	63.28	0.00e+00	791.00
IUUC-Sbi-113822	Sorghum bicolor	32.93	7.00e-27	115.00
IUUC-Ssc-116242	Sus scrofa	80.73	6.00e-150	523.00
IUUC-Tgu-116765	Taeniopygia guttata	70.70	0.00e+00	894.00
IUUC-Tru-117738	Takifugu rubripes	44.27	4.00e-155	541.00
IUUC-Tsy-118856	Tarsius syrichta	67.25	0.00e+00	808.00
IUUC-Tni-120871	Tetraodon nigroviridis	44.33	3.00e-152	531.00
IUUC-Tca-120965	Theobroma cacao	31.65	5.00e-38	152.00
IUUC-Tae-124830	Triticum aestivum	29.21	1.00e-40	161.00
IUUC-Tur-126840	Triticum urartu	30.03	4.00e-40	159.00
IUUC-Ttr-128551	Tursiops truncatus	65.42	0.00e+00	827.00
IUUC-Vpa-130324	Vicugna pacos	68.55	0.00e+00	876.00
IUUC-Vvi-131699	Vitis vinifera	31.31	2.00e-40	160.00
IUUC-Xtr-131956	Xenopus tropicalis	62.41	0.00e+00	813.00
IUUC-Xma-132982	Xiphophorus maculatus	43.41	6.00e-142	497.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence