iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074103

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02008191

Gene Name

PAAF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000012572.2	ENSOCUT00000012574.2	ENSOCUP00000010826.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-14	53.6	174	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gH++++ + a    ++ +vsGs+Dgt ++WD 
   Q: 174  GHKGGILDTAIveRGRNVVSGSRDGTARLWDC 205
           799999999998855679*************6 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MAVPLRIQSD WAQALRKDEG EAWVSCHPPG KPSLYGSLTC QGLGLDGVPE VTASEGFIVN 60
EVNKKSIHIS CPKENASSKF LAPYTTFSRI HTKSITCLDI SSGGGLGVSS STDGNMKIWQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGCGGGG AGTCAAGATG GCGGTGCCTT TGAGGATTCA GAGCGACTGG GCTCAAGCCC 60
TCAGGTGAAT CCAGGCCCAG GACAGGAGGA CAGGAGGCGG GGAGCGGATG TTGCCCTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000502--C:proteasome complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002247	Ailuropoda melanoleuca	93.16	0.00e+00	729.00
IUUC-Apl-003653	Anas platyrhynchos	76.35	5.00e-150	523.00
IUUC-Aca-004747	Anolis carolinensis	76.73	2.00e-180	624.00
IUUC-Ago-007984	Ashbya gossypii	27.80	1.00e-20	94.40
IUUC-Bta-013482	Bos taurus	92.41	0.00e+00	730.00
IUUC-Cel-018693	Caenorhabditis elegans	27.08	3.00e-25	108.00
IUUC-Cja-018842	Callithrix jacchus	92.91	0.00e+00	729.00
IUUC-Cfa-020708	Canis familiaris	92.66	0.00e+00	727.00
IUUC-Cpo-021469	Cavia porcellus	92.15	0.00e+00	728.00
IUUC-Csa-024109	Chlorocebus sabaeus	93.67	0.00e+00	731.00
IUUC-Cin-025576	Ciona intestinalis	44.25	2.00e-78	286.00
IUUC-Dno-029167	Dasypus novemcinctus	91.65	0.00e+00	726.00
IUUC-Dor-030470	Dipodomys ordii	56.52	5.00e-104	370.00
IUUC-Ete-033078	Echinops telfairi	75.71	7.00e-76	277.00
IUUC-Eca-034292	Equus caballus	81.86	0.00e+00	633.00
IUUC-Eeu-035251	Erinaceus europaeus	89.65	0.00e+00	694.00
IUUC-Fca-035982	Felis catus	92.66	0.00e+00	730.00
IUUC-Fal-036938	Ficedula albicollis	76.73	2.00e-166	578.00
IUUC-Gga-040796	Gallus gallus	80.51	0.00e+00	637.00
IUUC-Ggo-044448	Gorilla gorilla	81.27	4.00e-139	486.00
IUUC-Hsa-046552	Homo sapiens	93.41	4.00e-177	613.00
IUUC-Itr-048359	Ictidomys tridecemlineatus	92.22	7.00e-173	599.00
IUUC-Lch-050291	Latimeria chalumnae	63.54	5.00e-132	463.00
IUUC-Loc-052254	Lepisosteus oculatus	69.87	4.00e-162	563.00
IUUC-Laf-053334	Loxodonta africana	92.41	0.00e+00	723.00
IUUC-Mcc-055257	Macaca mulatta	93.67	0.00e+00	732.00
IUUC-Meu-056613	Macropus eugenii	87.32	5.00e-136	476.00
IUUC-Mga-059647	Meleagris gallopavo	80.25	0.00e+00	636.00
IUUC-Mvi-060210	Microbotryum violaceum	25.68	3.00e-19	89.40
IUUC-Mmr-061119	Microcebus murinus	93.42	0.00e+00	736.00
IUUC-Mdo-062819	Monodelphis domestica	82.13	0.00e+00	669.00
IUUC-Mpu-066654	Mustela putorius furo	87.88	0.00e+00	669.00
IUUC-Mlu-067875	Myotis lucifugus	92.15	0.00e+00	726.00
IUUC-Nle-069290	Nomascus leucogenys	93.67	0.00e+00	733.00
IUUC-Opr-070348	Ochotona princeps	78.99	0.00e+00	627.00
IUUC-Oan-072693	Ornithorhynchus anatinus	77.66	6.00e-165	573.00
IUUC-Oga-089096	Otolemur garnettii	92.26	2.00e-172	597.00
IUUC-Oar-089389	Ovis aries	92.66	0.00e+00	731.00
IUUC-Ptr-090483	Pan troglodytes	94.18	0.00e+00	736.00
IUUC-Pan-091915	Papio anubis	95.35	2.00e-110	391.00
IUUC-Psi-093034	Pelodiscus sinensis	80.05	1.00e-173	602.00
IUUC-Pab-097969	Pongo abelii	94.43	0.00e+00	739.00
IUUC-Pca-100381	Procavia capensis	85.06	0.00e+00	661.00
IUUC-Pva-103127	Pteropus vampyrus	91.71	2.00e-115	409.00
IUUC-Sce-106259	Saccharomyces cerevisiae	36.36	9.00e-21	94.40
IUUC-Sha-106604	Sarcophilus harrisii	86.33	0.00e+00	693.00
IUUC-Sar-113535	Sorex araneus	89.92	0.00e+00	674.00
IUUC-Sre-115228	Sporisorium reilianum	36.63	2.00e-13	70.50
IUUC-Ssc-115947	Sus scrofa	92.66	0.00e+00	726.00
IUUC-Tgu-117085	Taeniopygia guttata	79.36	2.00e-154	538.00
IUUC-Tsy-119428	Tarsius syrichta	88.16	3.00e-76	278.00
IUUC-Tbe-127687	Tupaia belangeri	55.79	2.00e-57	216.00
IUUC-Ttr-129277	Tursiops truncatus	88.43	4.00e-114	404.00
IUUC-Vpa-130349	Vicugna pacos	83.54	0.00e+00	628.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence