iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-115947

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU855642

Gene Name

PAAF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000014831.2	ENSSSCT00000016183.2	ENSSSCP00000015750.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-16	60.3	174	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gH++++ + a    ++ +vsGs+Dgt ++WD 
   Q: 174  GHKGGILDTAIveRGKNVVSGSRDGTARLWDC 205
           799999999998866779*************6 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAAPLRIQSD WAQALRKDEG EAWLSCHPPG KPTLYGSLTC QGIGLDGIPE VIASEGFVVN 60
EINKKSIHIS CPKENASSKF LAPYTTFSRI HAKSITCLDI SSGGGLGVSS STDGSMKIWQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCGGGGGCA CCCACTTCCG GGGTAGAGCG GAAGAGGCGG GCTGGTGGAG GCGGGGTCAA 60
GATGGCGGCG CCTTTGAGGA TTCAGAGCGA CTGGGCTCAA GCCCTCAGGT GACTCCAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000502--C:proteasome complex

KEGG

ssc:100514355

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002247	Ailuropoda melanoleuca	96.17	0.00e+00	746.00
IUUC-Apl-003653	Anas platyrhynchos	78.45	3.00e-153	533.00
IUUC-Aca-004747	Anolis carolinensis	78.72	0.00e+00	639.00
IUUC-Ago-007984	Ashbya gossypii	27.35	4.00e-24	105.00
IUUC-Bta-013482	Bos taurus	96.43	0.00e+00	749.00
IUUC-Cel-018693	Caenorhabditis elegans	26.55	4.00e-27	115.00
IUUC-Cja-018842	Callithrix jacchus	94.39	0.00e+00	738.00
IUUC-Cfa-020708	Canis familiaris	95.92	0.00e+00	747.00
IUUC-Cpo-021469	Cavia porcellus	94.39	0.00e+00	741.00
IUUC-Csa-024109	Chlorocebus sabaeus	95.15	0.00e+00	739.00
IUUC-Cin-025576	Ciona intestinalis	44.08	1.00e-79	289.00
IUUC-Dno-029167	Dasypus novemcinctus	92.60	0.00e+00	727.00
IUUC-Dor-030470	Dipodomys ordii	57.81	2.00e-106	378.00
IUUC-Ete-033078	Echinops telfairi	76.27	1.00e-75	276.00
IUUC-Eca-034292	Equus caballus	85.53	0.00e+00	653.00
IUUC-Eeu-035251	Erinaceus europaeus	93.38	0.00e+00	714.00
IUUC-Fca-035982	Felis catus	95.66	0.00e+00	745.00
IUUC-Fal-036938	Ficedula albicollis	78.87	8.00e-171	592.00
IUUC-Gga-040796	Gallus gallus	82.65	0.00e+00	652.00
IUUC-Ggo-044448	Gorilla gorilla	83.01	2.00e-142	497.00
IUUC-Hsa-046552	Homo sapiens	94.26	3.00e-179	620.00
IUUC-Itr-048359	Ictidomys tridecemlineatus	89.24	5.00e-176	609.00
IUUC-Lch-050291	Latimeria chalumnae	64.29	2.00e-133	468.00
IUUC-Loc-052254	Lepisosteus oculatus	70.41	7.00e-164	569.00
IUUC-Laf-053334	Loxodonta africana	93.37	0.00e+00	726.00
IUUC-Mcc-055257	Macaca mulatta	95.15	0.00e+00	740.00
IUUC-Meu-056613	Macropus eugenii	87.19	6.00e-138	482.00
IUUC-Mga-059647	Meleagris gallopavo	82.40	0.00e+00	651.00
IUUC-Mvi-060210	Microbotryum violaceum	24.16	8.00e-15	74.70
IUUC-Mmr-061119	Microcebus murinus	95.92	0.00e+00	748.00
IUUC-Mdo-062819	Monodelphis domestica	83.25	0.00e+00	673.00
IUUC-Mpu-066654	Mustela putorius furo	90.08	0.00e+00	683.00
IUUC-Mlu-067875	Myotis lucifugus	95.92	0.00e+00	743.00
IUUC-Nle-069290	Nomascus leucogenys	95.15	0.00e+00	741.00
IUUC-Opr-070348	Ochotona princeps	78.06	2.00e-179	620.00
IUUC-Oan-072693	Ornithorhynchus anatinus	76.92	3.00e-165	573.00
IUUC-Ocu-074103	Oryctolagus cuniculus	92.66	0.00e+00	726.00
IUUC-Oga-089096	Otolemur garnettii	93.39	3.00e-174	603.00
IUUC-Oar-089389	Ovis aries	95.66	0.00e+00	744.00
IUUC-Ptr-090483	Pan troglodytes	95.66	0.00e+00	745.00
IUUC-Pan-091915	Papio anubis	94.42	2.00e-109	387.00
IUUC-Psi-093034	Pelodiscus sinensis	82.54	3.00e-178	617.00
IUUC-Pab-097969	Pongo abelii	95.92	0.00e+00	747.00
IUUC-Pca-100381	Procavia capensis	86.73	0.00e+00	671.00
IUUC-Pva-103127	Pteropus vampyrus	94.39	8.00e-118	416.00
IUUC-Sce-106259	Saccharomyces cerevisiae	30.00	1.00e-22	100.00
IUUC-Sha-106604	Sarcophilus harrisii	88.52	0.00e+00	705.00
IUUC-Sar-113535	Sorex araneus	91.88	0.00e+00	689.00
IUUC-Tgu-117085	Taeniopygia guttata	82.11	1.00e-160	558.00
IUUC-Tsy-119428	Tarsius syrichta	93.29	1.00e-78	286.00
IUUC-Tbe-127687	Tupaia belangeri	56.20	1.00e-57	216.00
IUUC-Ttr-129277	Tursiops truncatus	90.50	5.00e-115	407.00
IUUC-Vpa-130349	Vicugna pacos	85.46	0.00e+00	632.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence