iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000020782.18	ENSMUST00000103032.10	ENSMUSP00000099321.4
ENSMUSG00000020782.18	ENSMUST00000128826.1	ENSMUSP00000118304.1
ENSMUSG00000020782.18	ENSMUST00000177736.7	ENSMUSP00000136054.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	RAID2
Post-translational Modifications (PTMs)
CPLM	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-07	30.6	427	451

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf..sd.tllvsGsdDgtikvWD 29
           +la   +  +ll++G  Dgt++ WD
   Q: 427  SLAPppPQrDLLLTGHEDGTVRFWD 451
           45546655789************** PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MRRFLRTGHD PARERLKRDL FQFNKTVEHG FPHQPSALGY SPSLRILAIG TRSGAVKLYG 60
APGVEFMGLH KENNAVLQIH FLPGQCQLVT LLDDNSLHLW SLKVKGGVSE LQEEESFTLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGCCGGAG GTGAGCAGGA AGCAGACGGC CGCCCTGCAG CCCGTGGGCC GGAGCAGGGA 60
ACCCGAGTGG TGGGTGACGG CCGCTGAGGG ACGCCGAGGC CTCGGGCAGG GCCCGGCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000664--Lethal2_giant
IPR013577--LLGL2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2

Pfam

PF08366--LLGL

PRINTS

PR00962--LETHAL2GIANT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0043231--C:intracellular membrane-bounded organelle
GO:0032878--P:regulation of establishment or maintenance of cell polarity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002413	Ailuropoda melanoleuca	87.12	0.00e+00	1747.00
IUUC-Apl-003619	Anas platyrhynchos	74.43	0.00e+00	1543.00
IUUC-Bta-013249	Bos taurus	87.06	0.00e+00	1790.00
IUUC-Cfa-020305	Canis familiaris	88.01	0.00e+00	1793.00
IUUC-Cpo-021354	Cavia porcellus	87.55	0.00e+00	1761.00
IUUC-Csa-024027	Chlorocebus sabaeus	88.49	0.00e+00	1751.00
IUUC-Dno-028910	Dasypus novemcinctus	85.77	0.00e+00	1652.00
IUUC-Dor-030976	Dipodomys ordii	86.31	0.00e+00	1733.00
IUUC-Ete-032938	Echinops telfairi	78.80	0.00e+00	898.00
IUUC-Eeu-035274	Erinaceus europaeus	85.53	0.00e+00	1615.00
IUUC-Fca-036585	Felis catus	91.05	0.00e+00	1182.00
IUUC-Fal-037603	Ficedula albicollis	75.95	0.00e+00	1556.00
IUUC-Gga-040222	Gallus gallus	72.88	0.00e+00	1540.00
IUUC-Ggo-045203	Gorilla gorilla	87.82	0.00e+00	1731.00
IUUC-Hsa-045870	Homo sapiens	88.39	0.00e+00	1782.00
IUUC-Lch-049973	Latimeria chalumnae	68.21	0.00e+00	1392.00
IUUC-Laf-053899	Loxodonta africana	85.19	0.00e+00	1755.00
IUUC-Mcc-055790	Macaca mulatta	88.30	0.00e+00	1744.00
IUUC-Mga-059850	Meleagris gallopavo	72.15	0.00e+00	1501.00
IUUC-Mmr-060930	Microcebus murinus	84.83	0.00e+00	1677.00
IUUC-Mdo-062588	Monodelphis domestica	79.54	0.00e+00	1672.00
IUUC-Mpu-065729	Mustela putorius furo	86.58	0.00e+00	1764.00
IUUC-Mlu-066984	Myotis lucifugus	87.21	0.00e+00	1765.00
IUUC-Nle-069136	Nomascus leucogenys	87.56	0.00e+00	1695.00
IUUC-Oan-073438	Ornithorhynchus anatinus	70.85	0.00e+00	1249.00
IUUC-Ocu-074863	Oryctolagus cuniculus	85.62	0.00e+00	1665.00
IUUC-Opu-083377	Oryza punctata	22.27	2.00e-07	51.60
IUUC-Oga-088270	Otolemur garnettii	87.61	0.00e+00	1760.00
IUUC-Ptr-091452	Pan troglodytes	89.24	0.00e+00	1709.00
IUUC-Pan-092654	Papio anubis	88.77	0.00e+00	1759.00
IUUC-Psi-093341	Pelodiscus sinensis	75.45	0.00e+00	1559.00
IUUC-Pva-102373	Pteropus vampyrus	87.54	0.00e+00	1755.00
IUUC-Rno-104988	Rattus norvegicus	93.72	0.00e+00	1908.00
IUUC-Sha-106592	Sarcophilus harrisii	75.80	0.00e+00	1528.00
IUUC-Tgu-117381	Taeniopygia guttata	75.61	0.00e+00	1537.00
IUUC-Tbe-127984	Tupaia belangeri	84.63	0.00e+00	898.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence