iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093130

Ensembl Protein ID

ENSPSIP00000001804.1

UniProt Accession

K7F194; K7F194_PELSI

Genbank Protein ID

ENSPSIP00000001804

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01095583

Gene Name

RAG1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000001811.1	ENSPSIT00000001811.1	ENSPSIP00000001804.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	81.11	0.00e+00	1771.00	IUUC-Hsa-045964
E3 activity/RING/RING	78.46	0.00e+00	1721.00	IUUC-Mmu-064297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MSLHTMPEEI QHPYTKFSEW KFKLFKVRSF EKTPSGDSQV ANKEKAEEVV SLDKGTVVQK 60
DAAVPQAEKP LLADAELKHS KQALEKDADN LKMKENAAHQ ANLQQLCRVC GVSFKTDRYK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCTGC ACACCATGCC AGAAGAAATC CAACATCCAT ATACTAAATT TTCTGAATGG 60
AAGTTCAAGC TGTTTAAAGT GAGATCCTTT GAAAAAACAC CTTCTGGAGA CAGCCAAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0233--DNA recombination
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR024627--RAG1
IPR019485--RAG1_Znf
IPR023336--RAG_nonamer-bd_dom
IPR013087--Znf_C2H2_type
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51487--NBD
PS51765--ZF_RAG1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF12940--RAG1
PF00097--zf-C3HC4
PF10426--zf-RAG1

SMART

SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0004519--F:endonuclease activity
GO:0043565--F:sequence-specific DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0002250--P:adaptive immune response
GO:0010390--P:histone monoubiquitination
GO:0043154--P:negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0070244--P:negative regulation of thymocyte apoptotic process
GO:0045582--P:positive regulation of T cell differentiation
GO:0002331--P:pre-B cell allelic exclusion
GO:0051865--P:protein autoubiquitination
GO:0033077--P:T cell differentiation in thymus
GO:0043029--P:T cell homeostasis
GO:0048538--P:thymus development
GO:0033151--P:V(D)J recombination

KEGG

pss:102463645

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001206	Ailuropoda melanoleuca	80.60	0.00e+00	1713.00
IUUC-Apl-003271	Anas platyrhynchos	84.53	0.00e+00	1855.00
IUUC-Aca-004400	Anolis carolinensis	80.08	0.00e+00	1765.00
IUUC-Ame-011295	Astyanax mexicanus	58.84	0.00e+00	1240.00
IUUC-Bta-012421	Bos taurus	80.16	0.00e+00	1716.00
IUUC-Cja-019891	Callithrix jacchus	79.15	0.00e+00	1683.00
IUUC-Cfa-020740	Canis familiaris	73.97	0.00e+00	1609.00
IUUC-Cpo-021800	Cavia porcellus	79.52	0.00e+00	1649.00
IUUC-Csa-024203	Chlorocebus sabaeus	79.36	0.00e+00	1503.00
IUUC-Dre-028416	Danio rerio	59.15	0.00e+00	1224.00
IUUC-Dno-029101	Dasypus novemcinctus	79.50	0.00e+00	1691.00
IUUC-Dse-031478	Dothistroma septosporum	27.27	1.00e-10	61.60
IUUC-Eca-033385	Equus caballus	80.31	0.00e+00	1711.00
IUUC-Fca-036545	Felis catus	79.63	0.00e+00	1697.00
IUUC-Fal-037208	Ficedula albicollis	83.17	0.00e+00	1828.00
IUUC-Gmo-039622	Gadus morhua	54.95	0.00e+00	1158.00
IUUC-Gga-041182	Gallus gallus	83.66	0.00e+00	1798.00
IUUC-Gac-041682	Gasterosteus aculeatus	57.02	0.00e+00	1211.00
IUUC-Ggo-044510	Gorilla gorilla	81.11	0.00e+00	1721.00
IUUC-Hsa-045964	Homo sapiens	81.11	0.00e+00	1721.00
IUUC-Itr-048862	Ictidomys tridecemlineatus	80.12	0.00e+00	1698.00
IUUC-Lch-050041	Latimeria chalumnae	70.76	0.00e+00	1508.00
IUUC-Loc-052464	Lepisosteus oculatus	65.33	0.00e+00	1399.00
IUUC-Laf-053544	Loxodonta africana	80.69	0.00e+00	1719.00
IUUC-Mcc-054867	Macaca mulatta	80.50	0.00e+00	1710.00
IUUC-Meu-055986	Macropus eugenii	79.31	0.00e+00	1550.00
IUUC-Mga-059262	Meleagris gallopavo	83.56	0.00e+00	1806.00
IUUC-Mdo-062686	Monodelphis domestica	79.79	0.00e+00	1740.00
IUUC-Mmu-064297	Mus musculus	78.46	0.00e+00	1713.00
IUUC-Mpu-066027	Mustela putorius furo	78.54	0.00e+00	1684.00
IUUC-Mlu-067885	Myotis lucifugus	80.69	0.00e+00	1722.00
IUUC-Nle-070073	Nomascus leucogenys	80.40	0.00e+00	1709.00
IUUC-Ont-071400	Oreochromis niloticus	60.19	0.00e+00	1269.00
IUUC-Oan-072920	Ornithorhynchus anatinus	92.89	0.00e+00	776.00
IUUC-Ocu-074616	Oryctolagus cuniculus	80.12	0.00e+00	1694.00
IUUC-Ola-086828	Oryzias latipes	59.98	0.00e+00	1257.00
IUUC-Oga-088675	Otolemur garnettii	90.41	2.00e-150	523.00
IUUC-Oar-090380	Ovis aries	79.73	0.00e+00	1735.00
IUUC-Ptr-090648	Pan troglodytes	80.92	0.00e+00	1716.00
IUUC-Pan-092036	Papio anubis	80.40	0.00e+00	1708.00
IUUC-Pfo-097273	Poecilia formosa	60.00	0.00e+00	1229.00
IUUC-Pca-100134	Procavia capensis	75.14	0.00e+00	1587.00
IUUC-Rno-105632	Rattus norvegicus	78.25	0.00e+00	1711.00
IUUC-Sha-107238	Sarcophilus harrisii	78.56	0.00e+00	1724.00
IUUC-Sar-113591	Sorex araneus	69.95	0.00e+00	1477.00
IUUC-Ssc-115720	Sus scrofa	79.44	0.00e+00	1686.00
IUUC-Tgu-117030	Taeniopygia guttata	84.02	0.00e+00	1813.00
IUUC-Tru-117669	Takifugu rubripes	57.68	0.00e+00	1161.00
IUUC-Tsy-119578	Tarsius syrichta	77.22	0.00e+00	1646.00
IUUC-Tni-120073	Tetraodon nigroviridis	58.59	0.00e+00	1211.00
IUUC-Tbe-128029	Tupaia belangeri	68.22	0.00e+00	784.00
IUUC-Ttr-128677	Tursiops truncatus	88.67	0.00e+00	768.00
IUUC-Vpa-130346	Vicugna pacos	91.65	0.00e+00	862.00
IUUC-Xtr-132442	Xenopus tropicalis	87.11	3.00e-100	356.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence