iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023996

Ensembl Protein ID

ENSCSAP00000004273.1

UniProt Accession

A0A0D9R6N4; A0A0D9R6N4_CHLSB

Genbank Protein ID

ENSCSAP00000004273

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01155634

Gene Name

TRIM52

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000008008.1	ENSCSAT00000006064.1	ENSCSAP00000004273.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.10e-10	39.2	20	53
E3 activity/RING/U-box	1.00e-05	25.4	16	45

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglkns 35
           CaiCl+ fkd p++ +CgH f++ C+ q w g+k++
   Q: 20   CAICLDYFKD-PVSISCGHNFCRGCVtQLW-GKKDE 53
           **********.**************99999.55554 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIe 33
           ee +C+I l+ ++dPv +++G+ + r ++ 
   Q: 16   EEAVCAICLDYFKDPVSISCGHNFCRGCVT 45
           7889*******************9998876 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MAGYATTPSP MQTLQEEAVC AICLDYFKDP VSISCGHNFC RGCVTQLWGK KDEEDQNEEG 60
DEWEEEEDGE AVGAVDGWDG SVREVLYRGN ADEELFQDQE DGELWLGDSG ITNWDNVDHM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGCCCGGGC GGGGCTTCCC GGAGAGATTT ATCCCCCTTC CCTCTAAACT TCCCGGGGCT 60
CCCGCTCAGG CCGGACAACA GCTCGGAAAC CCAGTCCCCC TCGAGGGTTG ACCCCTCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-013348	Bos taurus	70.59	3.00e-85	308.00
IUUC-Cfa-020624	Canis familiaris	72.69	9.00e-100	356.00
IUUC-Dno-029560	Dasypus novemcinctus	69.20	7.00e-88	316.00
IUUC-Eeu-035330	Erinaceus europaeus	60.39	4.00e-32	131.00
IUUC-Fca-035760	Felis catus	74.73	4.00e-94	337.00
IUUC-Ggo-044507	Gorilla gorilla	92.96	1.00e-103	369.00
IUUC-Hsa-046579	Homo sapiens	92.99	9.00e-105	372.00
IUUC-Mcc-055238	Macaca mulatta	97.04	6.00e-117	413.00
IUUC-Oar-090240	Ovis aries	72.69	7.00e-91	326.00
IUUC-Ptr-090708	Pan troglodytes	88.93	1.00e-100	359.00
IUUC-Pan-092603	Papio anubis	96.67	7.00e-123	432.00
IUUC-Pab-097933	Pongo abelii	89.63	2.00e-101	361.00
IUUC-Ssc-116255	Sus scrofa	75.82	4.00e-89	320.00
IUUC-Ttr-128855	Tursiops truncatus	66.81	2.00e-58	219.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence